RNA–Protein interactions for RNA: ENST00000307616.1

C11orf40-201, Transcript of chromosome 11 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf40, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf40-201ENST00000307616 RNF40O75150 1001 aa12.54□□□□□ -0.4
C11orf40-201ENST00000307616 TMEM134Q9H6X4 195 aa12.54□□□□□ -0.4
C11orf40-201ENST00000307616 HCSTQ9UBK5 93 aa12.53□□□□□ -0.4
C11orf40-201ENST00000307616 HPS5Q9UPZ3 1129 aa12.52□□□□□ -0.41
C11orf40-201ENST00000307616 TSR3Q9UJK0 312 aaKnown RBP12.51□□□□□ -0.41
C11orf40-201ENST00000307616 WBP1LQ9NX94 342 aa12.5□□□□□ -0.41
C11orf40-201ENST00000307616 SLF2Q8IX21 1173 aa12.49□□□□□ -0.41
C11orf40-201ENST00000307616 SLC24A3Q9HC58 644 aa12.49□□□□□ -0.41
C11orf40-201ENST00000307616 PPP4CP60510 307 aa12.48□□□□□ -0.41
C11orf40-201ENST00000307616 SLC4A3P48751 1232 aa12.47□□□□□ -0.41
C11orf40-201ENST00000307616 DAXXQ9UER7 740 aaPredicted RBP12.46□□□□□ -0.41
C11orf40-201ENST00000307616 MDM2Q00987 491 aaPredicted RBP12.45□□□□□ -0.42
C11orf40-201ENST00000307616 AK7Q96M32 723 aa12.45□□□□□ -0.42
C11orf40-201ENST00000307616 TPRNQ4KMQ1 711 aa12.43□□□□□ -0.42
C11orf40-201ENST00000307616 TRIM66O15016 1216 aa12.41□□□□□ -0.42
C11orf40-201ENST00000307616 SLC10A3P09131 477 aa12.41□□□□□ -0.42
C11orf40-201ENST00000307616 DDX11L8A8MPP1 907 aa12.4□□□□□ -0.42
C11orf40-201ENST00000307616 NYAP1Q6ZVC0 841 aa12.4□□□□□ -0.42
C11orf40-201ENST00000307616 NECTIN2Q92692 538 aa12.39□□□□□ -0.43
C11orf40-201ENST00000307616 GPCPD1Q9NPB8 672 aa12.39□□□□□ -0.43
C11orf40-201ENST00000307616 CLCN1P35523 988 aa12.38□□□□□ -0.43
C11orf40-201ENST00000307616 APLP1P51693 650 aa12.38□□□□□ -0.43
C11orf40-201ENST00000307616 AMHR2Q16671 573 aa12.38□□□□□ -0.43
C11orf40-201ENST00000307616 RDH13Q8NBN7 331 aa12.38□□□□□ -0.43
C11orf40-201ENST00000307616 TTLL12Q14166 644 aaPredicted RBP12.37□□□□□ -0.43
C11orf40-201ENST00000307616 REPIN1Q9BWE0 567 aaKnown RBP12.37□□□□□ -0.43
C11orf40-201ENST00000307616 CFHP08603 1231 aa12.36□□□□□ -0.43
C11orf40-201ENST00000307616 SULF1Q8IWU6 871 aa12.36□□□□□ -0.43
C11orf40-201ENST00000307616 RSPH4AQ5TD94 716 aa12.35□□□□□ -0.43
C11orf40-201ENST00000307616 TMUB1Q9BVT8 246 aa12.35□□□□□ -0.43
C11orf40-201ENST00000307616 PDE4DQ08499 809 aa12.33□□□□□ -0.44
C11orf40-201ENST00000307616 KMT5BQ4FZB7 885 aa12.32□□□□□ -0.44
C11orf40-201ENST00000307616 PARP9Q8IXQ6 854 aa12.32□□□□□ -0.44
C11orf40-201ENST00000307616 FAM217BQ9NTX9 383 aaPredicted RBP12.32□□□□□ -0.44
C11orf40-201ENST00000307616 GIGYF2Q6Y7W6 1299 aaKnown RBP12.31□□□□□ -0.44
C11orf40-201ENST00000307616 PRR14Q9BWN1 585 aa12.31□□□□□ -0.44
C11orf40-201ENST00000307616 PRKCSHP14314 528 aaPredicted RBP12.3□□□□□ -0.44
C11orf40-201ENST00000307616 CD46P15529 392 aa12.3□□□□□ -0.44
C11orf40-201ENST00000307616 ACTN4O43707 911 aaKnown RBP12.28□□□□□ -0.44
C11orf40-201ENST00000307616 SSTR3P32745 418 aaPredicted RBP12.28□□□□□ -0.44
C11orf40-201ENST00000307616 GCGRP47871 477 aa12.28□□□□□ -0.44
C11orf40-201ENST00000307616 PLA2G2EQ9NZK7 142 aa12.28□□□□□ -0.44
C11orf40-201ENST00000307616 MTRQ99707 1265 aa12.27□□□□□ -0.45
C11orf40-201ENST00000307616 COPS2P61201 443 aa12.26□□□□□ -0.45
C11orf40-201ENST00000307616 PCDHB3Q9Y5E6 796 aa12.26□□□□□ -0.45
C11orf40-201ENST00000307616 ITGBL1O95965 494 aaPredicted RBP12.24□□□□□ -0.45
C11orf40-201ENST00000307616 TJAP1Q5JTD0 557 aa12.24□□□□□ -0.45
C11orf40-201ENST00000307616 MS4A1P11836 297 aa12.23□□□□□ -0.45
C11orf40-201ENST00000307616 FUT2Q10981 343 aa12.23□□□□□ -0.45
C11orf40-201ENST00000307616 PUS10Q3MIT2 529 aaKnown RBP12.23□□□□□ -0.45
C11orf40-201ENST00000307616 BLOC1S3Q6QNY0 202 aa12.23□□□□□ -0.45
C11orf40-201ENST00000307616 KCNC4Q03721 635 aa12.21□□□□□ -0.45
C11orf40-201ENST00000307616 IL21Q9HBE4 155 aa12.21□□□□□ -0.45
C11orf40-201ENST00000307616 GPBP1L1Q9HC44 474 aaPredicted RBP12.21□□□□□ -0.45
C11orf40-201ENST00000307616 KDM4AO75164 1064 aa12.2□□□□□ -0.46
C11orf40-201ENST00000307616 ZNF516Q92618 1163 aa12.2□□□□□ -0.46
C11orf40-201ENST00000307616 BEGAINQ9BUH8 593 aa12.19□□□□□ -0.46
C11orf40-201ENST00000307616 ATP6V1AP38606 617 aa12.18□□□□□ -0.46
C11orf40-201ENST00000307616 NUTM1Q86Y26 1132 aa12.17□□□□□ -0.46
C11orf40-201ENST00000307616 ZPR1O75312 459 aa12.16□□□□□ -0.46
C11orf40-201ENST00000307616 MORN1Q5T089 497 aa12.16□□□□□ -0.46
C11orf40-201ENST00000307616 KDM4CQ9H3R0 1056 aa12.16□□□□□ -0.46
C11orf40-201ENST00000307616 NR1I2O75469 434 aa12.15□□□□□ -0.46
C11orf40-201ENST00000307616 IFFO2Q5TF58 517 aa12.15□□□□□ -0.46
C11orf40-201ENST00000307616 GRIPAP1Q4V328 841 aa12.14□□□□□ -0.47
C11orf40-201ENST00000307616 SCUBE3Q8IX30 993 aa12.14□□□□□ -0.47
C11orf40-201ENST00000307616 HLA-CQ95604 372 aa12.14□□□□□ -0.47
C11orf40-201ENST00000307616 HOXA2O43364 376 aa12.13□□□□□ -0.47
C11orf40-201ENST00000307616 USP46P62068 366 aa12.13□□□□□ -0.47
C11orf40-201ENST00000307616 NEUROD2Q15784 382 aa12.13□□□□□ -0.47
C11orf40-201ENST00000307616 NKX2-3Q8TAU0 364 aa12.13□□□□□ -0.47
C11orf40-201ENST00000307616 SPIRE2Q8WWL2 714 aa12.13□□□□□ -0.47
C11orf40-201ENST00000307616 SLC27A5Q9Y2P5 690 aa12.13□□□□□ -0.47
C11orf40-201ENST00000307616 TLL1O43897 1013 aa12.12□□□□□ -0.47
C11orf40-201ENST00000307616 GUCA2AQ02747 115 aa12.1□□□□□ -0.47
C11orf40-201ENST00000307616 TBC1D2Q9BYX2 928 aa12.1□□□□□ -0.47
C11orf40-201ENST00000307616 BRPF1P55201 1214 aaPredicted RBP12.09□□□□□ -0.47
C11orf40-201ENST00000307616 FAM117AQ9C073 453 aa12.08□□□□□ -0.48
C11orf40-201ENST00000307616 MOXD2PA6NHM9 499 aa12.07□□□□□ -0.48
C11orf40-201ENST00000307616 NDUFV2P19404 249 aa12.07□□□□□ -0.48
C11orf40-201ENST00000307616 A0A0G2JS52 829 aa12.06□□□□□ -0.48
C11orf40-201ENST00000307616 DIXDC1Q155Q3 683 aa12.05□□□□□ -0.48
C11orf40-201ENST00000307616 RNF19BQ6ZMZ0 732 aa12.05□□□□□ -0.48
C11orf40-201ENST00000307616 THAP11Q96EK4 314 aa12.05□□□□□ -0.48
C11orf40-201ENST00000307616 FMNL1O95466 1100 aaPredicted RBP12.04□□□□□ -0.48
C11orf40-201ENST00000307616 ADH1BP00325 375 aa12.04□□□□□ -0.48
C11orf40-201ENST00000307616 SPSB2Q99619 263 aa12.04□□□□□ -0.48
C11orf40-201ENST00000307616 FDX1P10109 184 aa12.03□□□□□ -0.48
C11orf40-201ENST00000307616 BRICD5Q6PL45 260 aa12.03□□□□□ -0.48
C11orf40-201ENST00000307616 PCDHGC3Q9UN70 934 aa12.03□□□□□ -0.48
C11orf40-201ENST00000307616 Q3C1V9 767 aa12.02□□□□□ -0.49
C11orf40-201ENST00000307616 PPP1R18Q6NYC8 613 aa12.02□□□□□ -0.49
C11orf40-201ENST00000307616 DDRGK1Q96HY6 314 aa12.02□□□□□ -0.49
C11orf40-201ENST00000307616 SALL2Q9Y467 1007 aaPredicted RBP12.02□□□□□ -0.49
C11orf40-201ENST00000307616 MYSM1Q5VVJ2 828 aa12.01□□□□□ -0.49
C11orf40-201ENST00000307616 SYMPKQ92797 1274 aaKnown RBP12.01□□□□□ -0.49
C11orf40-201ENST00000307616 PLEKHG3A1L390 1219 aa12□□□□□ -0.49
C11orf40-201ENST00000307616 S1PR4O95977 384 aa12□□□□□ -0.49
C11orf40-201ENST00000307616 RSBN1LQ6PCB5 846 aaPredicted RBP12□□□□□ -0.49
C11orf40-201ENST00000307616 RIC3Q7Z5B4 369 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms