RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 TXNDC2Q86VQ3 553 aa17.12■□□□□ 0.33
CLCC1-201ENST00000302500 CHD2O14647 1828 aaKnown RBP17.12■□□□□ 0.33
CLCC1-201ENST00000302500 RIMS2Q9UQ26 1411 aa17.11■□□□□ 0.33
CLCC1-201ENST00000302500 ADAMTS13Q76LX8 1427 aa17.1■□□□□ 0.33
CLCC1-201ENST00000302500 PLEKHG1Q9ULL1 1385 aa17.1■□□□□ 0.33
CLCC1-201ENST00000302500 NEXMIFQ5QGS0 1516 aa17.1■□□□□ 0.33
CLCC1-201ENST00000302500 SETD1AO15047 1707 aaKnown RBP17.08■□□□□ 0.32
CLCC1-201ENST00000302500 SETBP1Q9Y6X0 1596 aa17.08■□□□□ 0.32
CLCC1-201ENST00000302500 KIF1BO60333 1816 aa17.07■□□□□ 0.32
CLCC1-201ENST00000302500 DIP2AQ14689 1571 aa17.06■□□□□ 0.32
CLCC1-201ENST00000302500 IFT172Q9UG01 1749 aa17.04■□□□□ 0.32
CLCC1-201ENST00000302500 NKTRP30414 1462 aaKnown RBP17.04■□□□□ 0.32
CLCC1-201ENST00000302500 EID1Q9Y6B2 187 aa17.03■□□□□ 0.32
CLCC1-201ENST00000302500 PPLO60437 1756 aa17.03■□□□□ 0.32
CLCC1-201ENST00000302500 XRN1Q8IZH2 1706 aaKnown RBP17.03■□□□□ 0.32
CLCC1-201ENST00000302500 SETD5Q9C0A6 1442 aa17.02■□□□□ 0.32
CLCC1-201ENST00000302500 SPATA31E1Q6ZUB1 1445 aa17■□□□□ 0.31
CLCC1-201ENST00000302500 PTPRUQ92729 1446 aa17■□□□□ 0.31
CLCC1-201ENST00000302500 STAG3Q9UJ98 1225 aa16.99■□□□□ 0.31
CLCC1-201ENST00000302500 SLC26A8Q96RN1 970 aa16.98■□□□□ 0.31
CLCC1-201ENST00000302500 RAB3GAP2Q9H2M9 1393 aa16.98■□□□□ 0.31
CLCC1-201ENST00000302500 KCNA6P17658 529 aa16.97■□□□□ 0.31
CLCC1-201ENST00000302500 TBX22Q9Y458 520 aa16.97■□□□□ 0.31
CLCC1-201ENST00000302500 SLC4A1APQ9BWU0 796 aaKnown RBP16.96■□□□□ 0.31
CLCC1-201ENST00000302500 PIK3R4Q99570 1358 aa16.96■□□□□ 0.31
CLCC1-201ENST00000302500 PRAG1Q86YV5 1406 aa16.95■□□□□ 0.3
CLCC1-201ENST00000302500 FOXD1Q16676 465 aa16.95■□□□□ 0.3
CLCC1-201ENST00000302500 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.95■□□□□ 0.3
CLCC1-201ENST00000302500 MPHOSPH9Q99550 1183 aa16.95■□□□□ 0.3
CLCC1-201ENST00000302500 TMEM94Q12767 1356 aa16.94■□□□□ 0.3
CLCC1-201ENST00000302500 TRIM52Q96A61 297 aa16.93■□□□□ 0.3
CLCC1-201ENST00000302500 UBAP1LF5GYI3 381 aa16.92■□□□□ 0.3
CLCC1-201ENST00000302500 NUTM2DQ5VT03 806 aaPredicted RBP16.92■□□□□ 0.3
CLCC1-201ENST00000302500 METP08581 1390 aa16.91■□□□□ 0.3
CLCC1-201ENST00000302500 NCOA3Q9Y6Q9 1424 aa16.9■□□□□ 0.3
CLCC1-201ENST00000302500 HRCP23327 699 aa16.9■□□□□ 0.3
CLCC1-201ENST00000302500 ASXL1Q8IXJ9 1541 aa16.89■□□□□ 0.3
CLCC1-201ENST00000302500 CHGAP10645 457 aaKnown RBP16.89■□□□□ 0.29
CLCC1-201ENST00000302500 NRXN1Q9ULB1 1477 aa16.89■□□□□ 0.29
CLCC1-201ENST00000302500 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.88■□□□□ 0.29
CLCC1-201ENST00000302500 ACIN1Q9UKV3 1341 aaKnown RBP16.88■□□□□ 0.29
CLCC1-201ENST00000302500 HDGFP51858 240 aaKnown RBP16.88■□□□□ 0.29
CLCC1-201ENST00000302500 CCDC144AA2RUR9 1427 aa16.88■□□□□ 0.29
CLCC1-201ENST00000302500 ANKRD30BQ9BXX2 1392 aa16.87■□□□□ 0.29
CLCC1-201ENST00000302500 NALCNQ8IZF0 1738 aa16.86■□□□□ 0.29
CLCC1-201ENST00000302500 RPGRIP1LQ68CZ1 1315 aa16.86■□□□□ 0.29
CLCC1-201ENST00000302500 ROBO1Q9Y6N7 1651 aa16.85■□□□□ 0.29
CLCC1-201ENST00000302500 TOM1O60784 492 aa16.85■□□□□ 0.29
CLCC1-201ENST00000302500 PPP1R15AO75807 674 aaPredicted RBP16.85■□□□□ 0.29
CLCC1-201ENST00000302500 FAM135BQ49AJ0 1406 aa16.85■□□□□ 0.29
CLCC1-201ENST00000302500 PIK3C2GO75747 1445 aa16.84■□□□□ 0.29
CLCC1-201ENST00000302500 RBM33Q96EV2 1170 aaKnown RBP16.84■□□□□ 0.29
CLCC1-201ENST00000302500 PTCH1Q13635 1447 aa16.82■□□□□ 0.28
CLCC1-201ENST00000302500 KNDC1Q76NI1 1749 aa16.82■□□□□ 0.28
CLCC1-201ENST00000302500 HSPA1LP34931 641 aa16.82■□□□□ 0.28
CLCC1-201ENST00000302500 MYOM2P54296 1465 aa16.82■□□□□ 0.28
CLCC1-201ENST00000302500 ADGRF5Q8IZF2 1346 aa16.81■□□□□ 0.28
CLCC1-201ENST00000302500 ZNF326Q5BKZ1 582 aaKnown RBP16.8■□□□□ 0.28
CLCC1-201ENST00000302500 PROSER2Q86WR7 435 aaPredicted RBP16.8■□□□□ 0.28
CLCC1-201ENST00000302500 AMOTL2Q9Y2J4 779 aa16.8■□□□□ 0.28
CLCC1-201ENST00000302500 TECPR2O15040 1411 aa16.8■□□□□ 0.28
CLCC1-201ENST00000302500 DCCP43146 1447 aa16.8■□□□□ 0.28
CLCC1-201ENST00000302500 PIP4K2BP78356 416 aa16.78■□□□□ 0.28
CLCC1-201ENST00000302500 COL16A1Q07092 1604 aaPredicted RBP16.78■□□□□ 0.28
CLCC1-201ENST00000302500 ROBO2Q9HCK4 1378 aa16.77■□□□□ 0.28
CLCC1-201ENST00000302500 VGFO15240 615 aaPredicted RBP16.77■□□□□ 0.28
CLCC1-201ENST00000302500 LAMC1P11047 1609 aa16.77■□□□□ 0.27
CLCC1-201ENST00000302500 MED1Q15648 1581 aaPredicted RBP16.76■□□□□ 0.27
CLCC1-201ENST00000302500 ADGRL3Q9HAR2 1447 aa16.76■□□□□ 0.27
CLCC1-201ENST00000302500 MSH6P52701 1360 aa16.76■□□□□ 0.27
CLCC1-201ENST00000302500 AHDC1Q5TGY3 1603 aaPredicted RBP16.75■□□□□ 0.27
CLCC1-201ENST00000302500 ADGRB1O14514 1584 aa16.75■□□□□ 0.27
CLCC1-201ENST00000302500 MST1RQ04912 1400 aa16.75■□□□□ 0.27
CLCC1-201ENST00000302500 BCANQ96GW7 911 aa16.74■□□□□ 0.27
CLCC1-201ENST00000302500 NHSL1Q5SYE7 1610 aa16.74■□□□□ 0.27
CLCC1-201ENST00000302500 DHX57Q6P158 1386 aaKnown RBP16.73■□□□□ 0.27
CLCC1-201ENST00000302500 C19orf44Q9H6X5 657 aa16.72■□□□□ 0.27
CLCC1-201ENST00000302500 PHLPP1O60346 1717 aa16.71■□□□□ 0.27
CLCC1-201ENST00000302500 SLAIN2Q9P270 581 aa16.7■□□□□ 0.26
CLCC1-201ENST00000302500 CDC42BPGQ6DT37 1551 aa16.7■□□□□ 0.26
CLCC1-201ENST00000302500 RGL3Q3MIN7 710 aa16.7■□□□□ 0.26
CLCC1-201ENST00000302500 LRPPRCP42704 1394 aaKnown RBP16.69■□□□□ 0.26
CLCC1-201ENST00000302500 ABCC11Q96J66 1382 aa16.69■□□□□ 0.26
CLCC1-201ENST00000302500 C14orf93Q9H972 538 aaKnown RBP16.68■□□□□ 0.26
CLCC1-201ENST00000302500 YTHDC2Q9H6S0 1430 aaKnown RBP16.67■□□□□ 0.26
CLCC1-201ENST00000302500 SCAF1Q9H7N4 1312 aaKnown RBP16.67■□□□□ 0.26
CLCC1-201ENST00000302500 SHPRHQ149N8 1683 aa16.66■□□□□ 0.26
CLCC1-201ENST00000302500 DLC1Q96QB1 1528 aa16.66■□□□□ 0.26
CLCC1-201ENST00000302500 CADPS2Q86UW7 1296 aa16.66■□□□□ 0.26
CLCC1-201ENST00000302500 FMN2Q9NZ56 1722 aa16.65■□□□□ 0.26
CLCC1-201ENST00000302500 PLEKHH1Q9ULM0 1364 aa16.65■□□□□ 0.26
CLCC1-201ENST00000302500 KIAA1210Q9ULL0 1709 aa16.64■□□□□ 0.25
CLCC1-201ENST00000302500 BRINP3Q76B58 766 aa16.64■□□□□ 0.25
CLCC1-201ENST00000302500 C1orf167Q5SNV9 1468 aa16.64■□□□□ 0.25
CLCC1-201ENST00000302500 ILDR2Q71H61 639 aa16.63■□□□□ 0.25
CLCC1-201ENST00000302500 ADGRB2O60241 1585 aa16.62■□□□□ 0.25
CLCC1-201ENST00000302500 TMEM132EQ6IEE7 984 aa16.62■□□□□ 0.25
CLCC1-201ENST00000302500 ARHGEF28Q8N1W1 1705 aaKnown RBP16.61■□□□□ 0.25
CLCC1-201ENST00000302500 CFAP70Q5T0N1 1121 aa16.61■□□□□ 0.25
CLCC1-201ENST00000302500 SIRT1Q96EB6 747 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms