RNA–Protein interactions for RNA: ENST00000298694.8

ARHGEF40-201, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ARHGEF40, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-201ENST00000298694 AMOTL1Q8IY63 956 aa20.3■□□□□ 0.84
ARHGEF40-201ENST00000298694 USP35Q9P2H5 1018 aa20.3■□□□□ 0.84
ARHGEF40-201ENST00000298694 TRIM34Q9BYJ4 488 aa20.29■□□□□ 0.84
ARHGEF40-201ENST00000298694 LRRFIP1Q32MZ4 808 aaKnown RBP20.29■□□□□ 0.84
ARHGEF40-201ENST00000298694 ANO2Q9NQ90 1003 aa20.28■□□□□ 0.84
ARHGEF40-201ENST00000298694 USP47Q96K76 1375 aa20.28■□□□□ 0.84
ARHGEF40-201ENST00000298694 CCAR2Q8N163 923 aaKnown RBP20.28■□□□□ 0.84
ARHGEF40-201ENST00000298694 RUFY2Q8WXA3 655 aa20.28■□□□□ 0.84
ARHGEF40-201ENST00000298694 APAF1O14727 1248 aa20.27■□□□□ 0.84
ARHGEF40-201ENST00000298694 DIAPH1O60610 1272 aaKnown RBP20.27■□□□□ 0.84
ARHGEF40-201ENST00000298694 IFIT2P09913 472 aaKnown RBP20.27■□□□□ 0.84
ARHGEF40-201ENST00000298694 TRIM29Q14134 588 aa20.27■□□□□ 0.84
ARHGEF40-201ENST00000298694 TCEAL9Q9UHQ7 104 aa20.27■□□□□ 0.84
ARHGEF40-201ENST00000298694 APPP05067 770 aa20.26■□□□□ 0.83
ARHGEF40-201ENST00000298694 TPM1P09493 284 aa20.26■□□□□ 0.83
ARHGEF40-201ENST00000298694 TOP2AP11388 1531 aaKnown RBP20.26■□□□□ 0.83
ARHGEF40-201ENST00000298694 WWC1Q8IX03 1113 aa20.26■□□□□ 0.83
ARHGEF40-201ENST00000298694 SYTL4Q96C24 671 aaPredicted RBP20.26■□□□□ 0.83
ARHGEF40-201ENST00000298694 CPLX2Q6PUV4 134 aaKnown RBP20.25■□□□□ 0.83
ARHGEF40-201ENST00000298694 PRKRIP1Q9H875 184 aaPredicted RBP20.25■□□□□ 0.83
ARHGEF40-201ENST00000298694 CADPSQ9ULU8 1353 aa20.25■□□□□ 0.83
ARHGEF40-201ENST00000298694 SKOR2Q2VWA4 1001 aaPredicted RBP20.25■□□□□ 0.83
ARHGEF40-201ENST00000298694 CTDP1Q9Y5B0 961 aaPredicted RBP20.25■□□□□ 0.83
ARHGEF40-201ENST00000298694 ZKSCAN1P17029 563 aaPredicted RBP20.25■□□□□ 0.83
ARHGEF40-201ENST00000298694 DDX19BQ9UMR2 479 aa20.24■□□□□ 0.83
ARHGEF40-201ENST00000298694 RIPK4P57078 832 aa20.24■□□□□ 0.83
ARHGEF40-201ENST00000298694 FBXW7Q969H0 707 aa20.23■□□□□ 0.83
ARHGEF40-201ENST00000298694 VPS37DQ86XT2 251 aa20.23■□□□□ 0.83
ARHGEF40-201ENST00000298694 REC8O95072 547 aa20.23■□□□□ 0.83
ARHGEF40-201ENST00000298694 WIZO95785 1651 aa20.23■□□□□ 0.83
ARHGEF40-201ENST00000298694 PSME1Q06323 249 aa20.22■□□□□ 0.83
ARHGEF40-201ENST00000298694 DHX57Q6P158 1386 aaKnown RBP20.22■□□□□ 0.83
ARHGEF40-201ENST00000298694 PCMTD1Q96MG8 357 aaPredicted RBP20.22■□□□□ 0.83
ARHGEF40-201ENST00000298694 DHX16O60231 1041 aaKnown RBP20.22■□□□□ 0.83
ARHGEF40-201ENST00000298694 CPLX1O14810 134 aa20.21■□□□□ 0.83
ARHGEF40-201ENST00000298694 DDX58O95786 925 aaKnown RBP20.21■□□□□ 0.83
ARHGEF40-201ENST00000298694 ZBED9Q6R2W3 1325 aa20.21■□□□□ 0.83
ARHGEF40-201ENST00000298694 API5Q9BZZ5 524 aaKnown RBP20.21■□□□□ 0.83
ARHGEF40-201ENST00000298694 FKBP5Q13451 457 aaPredicted RBP20.2■□□□□ 0.82
ARHGEF40-201ENST00000298694 PTPRGP23470 1445 aa20.2■□□□□ 0.82
ARHGEF40-201ENST00000298694 DZIP1LQ8IYY4 767 aaKnown RBP20.2■□□□□ 0.82
ARHGEF40-201ENST00000298694 G3BP1Q13283 466 aaKnown RBP eCLIP20.19■□□□□ 0.822e-6■□□□□ 10.4
ARHGEF40-201ENST00000298694 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.18■□□□□ 0.82
ARHGEF40-201ENST00000298694 NFXL1Q6ZNB6 911 aa20.18■□□□□ 0.82
ARHGEF40-201ENST00000298694 MEX3CQ5U5Q3 659 aaKnown RBP20.18■□□□□ 0.82
ARHGEF40-201ENST00000298694 ZNF592Q92610 1267 aa20.18■□□□□ 0.82
ARHGEF40-201ENST00000298694 ROCK1Q13464 1354 aa20.18■□□□□ 0.82
ARHGEF40-201ENST00000298694 TRDNQ13061 729 aa20.18■□□□□ 0.82
ARHGEF40-201ENST00000298694 CCDC47Q96A33 483 aaKnown RBP20.17■□□□□ 0.82
ARHGEF40-201ENST00000298694 CCDC70Q6NSX1 233 aa20.17■□□□□ 0.82
ARHGEF40-201ENST00000298694 CYB5RLQ6IPT4 315 aa20.17■□□□□ 0.82
ARHGEF40-201ENST00000298694 RNF20Q5VTR2 975 aa20.16■□□□□ 0.82
ARHGEF40-201ENST00000298694 BICD2Q8TD16 824 aa20.16■□□□□ 0.82
ARHGEF40-201ENST00000298694 GSE1Q14687 1217 aa20.15■□□□□ 0.82
ARHGEF40-201ENST00000298694 TSPYL4Q9UJ04 414 aa20.15■□□□□ 0.82
ARHGEF40-201ENST00000298694 ERICH2A1L162 156 aa20.14■□□□□ 0.81
ARHGEF40-201ENST00000298694 ANKRD20A12PQ8NF67 263 aa20.14■□□□□ 0.81
ARHGEF40-201ENST00000298694 RUNDC1Q96C34 613 aa20.14■□□□□ 0.81
ARHGEF40-201ENST00000298694 FOSBP53539 338 aa20.13■□□□□ 0.81
ARHGEF40-201ENST00000298694 IPO7O95373 1038 aaKnown RBP20.13■□□□□ 0.81
ARHGEF40-201ENST00000298694 VPS37CA5D8V6 355 aaPredicted RBP20.12■□□□□ 0.81
ARHGEF40-201ENST00000298694 HMOX1P09601 288 aa20.12■□□□□ 0.81
ARHGEF40-201ENST00000298694 HOOK1Q9UJC3 728 aaKnown RBP20.12■□□□□ 0.81
ARHGEF40-201ENST00000298694 INTS3Q68E01 1043 aaKnown RBP20.11■□□□□ 0.81
ARHGEF40-201ENST00000298694 GPS2Q13227 327 aa20.1■□□□□ 0.81
ARHGEF40-201ENST00000298694 HSP90AA2PQ14568 343 aaPredicted RBP20.1■□□□□ 0.81
ARHGEF40-201ENST00000298694 SETQ01105 290 aaPredicted RBP20.1■□□□□ 0.81
ARHGEF40-201ENST00000298694 SMC3Q9UQE7 1217 aa20.1■□□□□ 0.81
ARHGEF40-201ENST00000298694 GNAI1P63096 354 aa20.09■□□□□ 0.81
ARHGEF40-201ENST00000298694 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.09■□□□□ 0.81
ARHGEF40-201ENST00000298694 AIMP1Q12904 312 aaKnown RBP20.09■□□□□ 0.81
ARHGEF40-201ENST00000298694 RIC3Q7Z5B4 369 aa20.09■□□□□ 0.81
ARHGEF40-201ENST00000298694 RAPGEF4Q8WZA2 1011 aa20.09■□□□□ 0.81
ARHGEF40-201ENST00000298694 SAMD1Q6SPF0 538 aaPredicted RBP20.08■□□□□ 0.81
ARHGEF40-201ENST00000298694 ERC2O15083 957 aa20.08■□□□□ 0.8
ARHGEF40-201ENST00000298694 RBM33Q96EV2 1170 aaKnown RBP20.08■□□□□ 0.8
ARHGEF40-201ENST00000298694 NEUROD6Q96NK8 337 aa20.08■□□□□ 0.8
ARHGEF40-201ENST00000298694 HSP90AB4PQ58FF6 505 aa20.08■□□□□ 0.8
ARHGEF40-201ENST00000298694 CCDC43Q96MW1 224 aaKnown RBP20.08■□□□□ 0.8
ARHGEF40-201ENST00000298694 HOMER1Q86YM7 354 aa20.07■□□□□ 0.8
ARHGEF40-201ENST00000298694 LNPKQ9C0E8 428 aa20.07■□□□□ 0.8
ARHGEF40-201ENST00000298694 FYB1O15117 783 aa20.06■□□□□ 0.8
ARHGEF40-201ENST00000298694 CHMP5Q9NZZ3 219 aa20.06■□□□□ 0.8
ARHGEF40-201ENST00000298694 NUTM2GQ5VZR2 741 aa20.06■□□□□ 0.8
ARHGEF40-201ENST00000298694 FANCD2Q9BXW9 1451 aa20.05■□□□□ 0.8
ARHGEF40-201ENST00000298694 PATL2C9JE40 543 aaKnown RBP20.05■□□□□ 0.8
ARHGEF40-201ENST00000298694 WASHC4Q2M389 1173 aa20.05■□□□□ 0.8
ARHGEF40-201ENST00000298694 CWC22Q9HCG8 908 aaKnown RBP20.05■□□□□ 0.8
ARHGEF40-201ENST00000298694 SASS6Q6UVJ0 657 aa20.05■□□□□ 0.8
ARHGEF40-201ENST00000298694 KLHL34Q8N239 644 aa20.05■□□□□ 0.8
ARHGEF40-201ENST00000298694 GGNBP2Q9H3C7 697 aa20.04■□□□□ 0.8
ARHGEF40-201ENST00000298694 SAFBQ15424 915 aaKnown RBP eCLIP20.04■□□□□ 0.8
ARHGEF40-201ENST00000298694 ATF3P18847 181 aa20.04■□□□□ 0.8
ARHGEF40-201ENST00000298694 CCDC27Q2M243 656 aa20.04■□□□□ 0.8
ARHGEF40-201ENST00000298694 RSPH6AQ9H0K4 717 aa20.03■□□□□ 0.8
ARHGEF40-201ENST00000298694 NLRP2Q9NX02 1062 aa20.03■□□□□ 0.8
ARHGEF40-201ENST00000298694 FBXO3Q9UK99 471 aa20.03■□□□□ 0.8
ARHGEF40-201ENST00000298694 RALYLQ86SE5 291 aaKnown RBP20.03■□□□□ 0.8
ARHGEF40-201ENST00000298694 CABP2Q9NPB3 220 aa20.03■□□□□ 0.8
ARHGEF40-201ENST00000298694 RUSC2Q8N2Y8 1516 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms