RNA–Protein interactions for RNA: ENST00000297354.6

SBSPON-201, Transcript of somatomedin B and thrombospondin type 1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SBSPON, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPON-201ENST00000297354 GAS2L3Q86XJ1 694 aa20.83■□□□□ 0.93
SBSPON-201ENST00000297354 CDCA8Q53HL2 280 aa20.82■□□□□ 0.92
SBSPON-201ENST00000297354 ZSCAN30Q86W11 494 aa20.82■□□□□ 0.92
SBSPON-201ENST00000297354 SAFB2Q14151 953 aaKnown RBP eCLIP20.81■□□□□ 0.92
SBSPON-201ENST00000297354 SSFA2P28290 1259 aa20.81■□□□□ 0.92
SBSPON-201ENST00000297354 TSR2Q969E8 191 aaKnown RBP20.81■□□□□ 0.92
SBSPON-201ENST00000297354 RLBP1P12271 317 aa20.8■□□□□ 0.92
SBSPON-201ENST00000297354 USP19O94966 1318 aa20.8■□□□□ 0.92
SBSPON-201ENST00000297354 KIAA1107Q9UPP5 1409 aa20.8■□□□□ 0.92
SBSPON-201ENST00000297354 PDE3AQ14432 1141 aa20.79■□□□□ 0.92
SBSPON-201ENST00000297354 SLC24A1O60721 1099 aa20.79■□□□□ 0.92
SBSPON-201ENST00000297354 PER1O15534 1290 aaPredicted RBP20.79■□□□□ 0.92
SBSPON-201ENST00000297354 SKOR2Q2VWA4 1001 aaPredicted RBP20.79■□□□□ 0.92
SBSPON-201ENST00000297354 KDM5BQ9UGL1 1544 aa20.78■□□□□ 0.92
SBSPON-201ENST00000297354 CDK13Q14004 1512 aaKnown RBP20.78■□□□□ 0.92
SBSPON-201ENST00000297354 CCDC173Q0VFZ6 552 aa20.78■□□□□ 0.92
SBSPON-201ENST00000297354 DZIP1LQ8IYY4 767 aaKnown RBP20.78■□□□□ 0.92
SBSPON-201ENST00000297354 RBM42Q9BTD8 480 aaKnown RBP20.78■□□□□ 0.92
SBSPON-201ENST00000297354 FAM177BA6PVY3 158 aa20.78■□□□□ 0.92
SBSPON-201ENST00000297354 ZKSCAN2Q63HK3 967 aa20.78■□□□□ 0.92
SBSPON-201ENST00000297354 C1orf115Q9H7X2 142 aa20.78■□□□□ 0.92
SBSPON-201ENST00000297354 KDM6BO15054 1643 aa20.77■□□□□ 0.92
SBSPON-201ENST00000297354 PRPF40AO75400 957 aaKnown RBP20.77■□□□□ 0.92
SBSPON-201ENST00000297354 DISP3Q9P2K9 1392 aa20.77■□□□□ 0.92
SBSPON-201ENST00000297354 IGSF3O75054 1194 aa20.77■□□□□ 0.91
SBSPON-201ENST00000297354 TCP11L2Q8N4U5 519 aa20.77■□□□□ 0.91
SBSPON-201ENST00000297354 DAPK1P53355 1430 aa20.76■□□□□ 0.91
SBSPON-201ENST00000297354 CBX1P83916 185 aa20.76■□□□□ 0.91
SBSPON-201ENST00000297354 CFAP53Q96M91 514 aa20.76■□□□□ 0.91
SBSPON-201ENST00000297354 ANTXR1Q9H6X2 564 aa20.76■□□□□ 0.91
SBSPON-201ENST00000297354 CCDC144AA2RUR9 1427 aa20.75■□□□□ 0.91
SBSPON-201ENST00000297354 CDK11BP21127 795 aaKnown RBP20.75■□□□□ 0.91
SBSPON-201ENST00000297354 ANKRD50Q9ULJ7 1429 aa20.75■□□□□ 0.91
SBSPON-201ENST00000297354 CC2D2AQ9P2K1 1620 aa20.75■□□□□ 0.91
SBSPON-201ENST00000297354 TEX14Q8IWB6 1497 aa20.74■□□□□ 0.91
SBSPON-201ENST00000297354 PARD3Q8TEW0 1356 aa20.74■□□□□ 0.91
SBSPON-201ENST00000297354 POLA1P09884 1462 aaPredicted RBP20.73■□□□□ 0.91
SBSPON-201ENST00000297354 WWC1Q8IX03 1113 aa20.73■□□□□ 0.91
SBSPON-201ENST00000297354 TSC1Q92574 1164 aa20.73■□□□□ 0.91
SBSPON-201ENST00000297354 FSD2A1L4K1 749 aa20.72■□□□□ 0.91
SBSPON-201ENST00000297354 RBM27Q9P2N5 1060 aaKnown RBP20.72■□□□□ 0.91
SBSPON-201ENST00000297354 ABCC5O15440 1437 aa20.72■□□□□ 0.91
SBSPON-201ENST00000297354 KIAA2012Q0VF49 1180 aa20.71■□□□□ 0.91
SBSPON-201ENST00000297354 RARSP54136 660 aaKnown RBP20.7■□□□□ 0.9
SBSPON-201ENST00000297354 DENND4BO75064 1496 aaPredicted RBP20.69■□□□□ 0.9
SBSPON-201ENST00000297354 SUPT6HQ7KZ85 1726 aaKnown RBP20.69■□□□□ 0.9
SBSPON-201ENST00000297354 CHMP7Q8WUX9 453 aaPredicted RBP20.68■□□□□ 0.9
SBSPON-201ENST00000297354 TOPBP1Q92547 1522 aa20.68■□□□□ 0.9
SBSPON-201ENST00000297354 SYCE3A1L190 88 aa20.67■□□□□ 0.9
SBSPON-201ENST00000297354 EHBP1L1Q8N3D4 1523 aa20.66■□□□□ 0.9
SBSPON-201ENST00000297354 PDS5BQ9NTI5 1447 aa20.66■□□□□ 0.9
SBSPON-201ENST00000297354 SPDYE4A6NLX3 237 aa20.66■□□□□ 0.9
SBSPON-201ENST00000297354 EXOSC9Q06265 439 aaKnown RBP20.66■□□□□ 0.9
SBSPON-201ENST00000297354 EIF3AQ14152 1382 aaKnown RBP20.66■□□□□ 0.9
SBSPON-201ENST00000297354 EFCAB5A4FU69 1503 aa20.65■□□□□ 0.9
SBSPON-201ENST00000297354 ZNF830Q96NB3 372 aaPredicted RBP20.65■□□□□ 0.9
SBSPON-201ENST00000297354 NKTRP30414 1462 aaKnown RBP20.65■□□□□ 0.9
SBSPON-201ENST00000297354 CHAMP1Q96JM3 812 aa20.65■□□□□ 0.9
SBSPON-201ENST00000297354 MVPQ14764 893 aaKnown RBP20.64■□□□□ 0.89
SBSPON-201ENST00000297354 CFAP43Q8NDM7 1665 aa20.63■□□□□ 0.89
SBSPON-201ENST00000297354 ZNF771Q7L3S4 317 aaPredicted RBP20.63■□□□□ 0.89
SBSPON-201ENST00000297354 K7ELQ4 463 aaPredicted RBP20.63■□□□□ 0.89
SBSPON-201ENST00000297354 MAP7D2Q96T17 732 aa20.63■□□□□ 0.89
SBSPON-201ENST00000297354 PTMSP20962 102 aa20.62■□□□□ 0.89
SBSPON-201ENST00000297354 OFD1O75665 1012 aa20.62■□□□□ 0.89
SBSPON-201ENST00000297354 TRAK1Q9UPV9 953 aa20.62■□□□□ 0.89
SBSPON-201ENST00000297354 ERBINQ96RT1 1412 aa20.62■□□□□ 0.89
SBSPON-201ENST00000297354 NUTM2DQ5VT03 806 aaPredicted RBP20.62■□□□□ 0.89
SBSPON-201ENST00000297354 PRG4Q92954 1404 aaPredicted RBP20.61■□□□□ 0.89
SBSPON-201ENST00000297354 MTHFSP49914 203 aa20.61■□□□□ 0.89
SBSPON-201ENST00000297354 NOB1Q9ULX3 412 aaKnown RBP20.61■□□□□ 0.89
SBSPON-201ENST00000297354 CHAF1AQ13111 956 aaPredicted RBP20.61■□□□□ 0.89
SBSPON-201ENST00000297354 DDX19BQ9UMR2 479 aa20.6■□□□□ 0.89
SBSPON-201ENST00000297354 JARID2Q92833 1246 aaPredicted RBP20.6■□□□□ 0.89
SBSPON-201ENST00000297354 RUNDC1Q96C34 613 aa20.6■□□□□ 0.89
SBSPON-201ENST00000297354 BAG4O95429 457 aaKnown RBP20.59■□□□□ 0.89
SBSPON-201ENST00000297354 PRIM1P49642 420 aaKnown RBP20.59■□□□□ 0.89
SBSPON-201ENST00000297354 GAS2L2Q8NHY3 880 aa20.59■□□□□ 0.89
SBSPON-201ENST00000297354 TESK2Q96S53 571 aa20.59■□□□□ 0.89
SBSPON-201ENST00000297354 ISY1Q9ULR0 285 aaKnown RBP20.59■□□□□ 0.89
SBSPON-201ENST00000297354 CHMP3Q9Y3E7 222 aa20.59■□□□□ 0.89
SBSPON-201ENST00000297354 GAPVD1Q14C86 1478 aa20.58■□□□□ 0.88
SBSPON-201ENST00000297354 CSPP1Q1MSJ5 1256 aa20.58■□□□□ 0.88
SBSPON-201ENST00000297354 TMEM57Q8N5G2 664 aa20.58■□□□□ 0.88
SBSPON-201ENST00000297354 BCORL1Q5H9F3 1711 aa20.57■□□□□ 0.88
SBSPON-201ENST00000297354 DRC7Q8IY82 874 aa20.57■□□□□ 0.88
SBSPON-201ENST00000297354 IPO8O15397 1037 aaKnown RBP20.57■□□□□ 0.88
SBSPON-201ENST00000297354 EPRSP07814 1512 aaKnown RBP20.56■□□□□ 0.88
SBSPON-201ENST00000297354 CASC1Q6TDU7 716 aa20.56■□□□□ 0.88
SBSPON-201ENST00000297354 BBXQ8WY36 941 aaPredicted RBP20.56■□□□□ 0.88
SBSPON-201ENST00000297354 SNAPC4Q5SXM2 1469 aa20.56■□□□□ 0.88
SBSPON-201ENST00000297354 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.56■□□□□ 0.88
SBSPON-201ENST00000297354 GDPD2Q9HCC8 539 aa20.55■□□□□ 0.88
SBSPON-201ENST00000297354 C17orf53Q8N3J3 647 aaPredicted RBP20.55■□□□□ 0.88
SBSPON-201ENST00000297354 RIPK4P57078 832 aa20.55■□□□□ 0.88
SBSPON-201ENST00000297354 RBSNQ9H1K0 784 aa20.55■□□□□ 0.88
SBSPON-201ENST00000297354 ABCA10Q8WWZ4 1543 aa20.54■□□□□ 0.88
SBSPON-201ENST00000297354 ZSCAN23Q3MJ62 389 aa20.54■□□□□ 0.88
SBSPON-201ENST00000297354 SLC12A5Q9H2X9 1139 aa20.54■□□□□ 0.88
SBSPON-201ENST00000297354 CD2BP2O95400 341 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms