RNA–Protein interactions for RNA: ENST00000296440.10

PLXNB1-201, Transcript of plexin B1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLXNB1, Length 7,143 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-201ENST00000296440 FOXD4L1Q9NU39 408 aa16.2■□□□□ 0.18
PLXNB1-201ENST00000296440 NUTM2GQ5VZR2 741 aa16.2■□□□□ 0.18
PLXNB1-201ENST00000296440 PMFBP1Q8TBY8 1022 aa16.19■□□□□ 0.18
PLXNB1-201ENST00000296440 DIAPH3Q9NSV4 1193 aa16.19■□□□□ 0.18
PLXNB1-201ENST00000296440 ARID3AQ99856 593 aa16.19■□□□□ 0.18
PLXNB1-201ENST00000296440 MINK1Q8N4C8 1332 aaPredicted RBP16.19■□□□□ 0.18
PLXNB1-201ENST00000296440 CUX2O14529 1486 aa16.19■□□□□ 0.18
PLXNB1-201ENST00000296440 IPO7O95373 1038 aaKnown RBP16.19■□□□□ 0.18
PLXNB1-201ENST00000296440 CHMP4BP1P59074 171 aa16.19■□□□□ 0.18
PLXNB1-201ENST00000296440 RIC3Q7Z5B4 369 aa16.18■□□□□ 0.18
PLXNB1-201ENST00000296440 IFIT2P09913 472 aaKnown RBP16.18■□□□□ 0.18
PLXNB1-201ENST00000296440 HSP90AB2PQ58FF8 381 aa16.18■□□□□ 0.18
PLXNB1-201ENST00000296440 NAP1L1P55209 391 aaKnown RBP16.18■□□□□ 0.18
PLXNB1-201ENST00000296440 CLUAP1Q96AJ1 413 aa16.18■□□□□ 0.18
PLXNB1-201ENST00000296440 AIMP1Q12904 312 aaKnown RBP16.18■□□□□ 0.18
PLXNB1-201ENST00000296440 PROSER2Q86WR7 435 aaPredicted RBP16.17■□□□□ 0.18
PLXNB1-201ENST00000296440 C16orf71Q8IYS4 520 aaPredicted RBP16.17■□□□□ 0.18
PLXNB1-201ENST00000296440 GZF1Q9H116 711 aaPredicted RBP16.17■□□□□ 0.18
PLXNB1-201ENST00000296440 CARMIL1Q5VZK9 1371 aa16.17■□□□□ 0.18
PLXNB1-201ENST00000296440 G3BP1Q13283 466 aaKnown RBP eCLIP16.16■□□□□ 0.18
PLXNB1-201ENST00000296440 RTN4Q9NQC3 1192 aaKnown RBP16.16■□□□□ 0.18
PLXNB1-201ENST00000296440 ANKRD30AQ9BXX3 1397 aa16.16■□□□□ 0.18
PLXNB1-201ENST00000296440 NEUROD6Q96NK8 337 aa16.15■□□□□ 0.18
PLXNB1-201ENST00000296440 ST18O60284 1047 aa16.15■□□□□ 0.18
PLXNB1-201ENST00000296440 VGFO15240 615 aaPredicted RBP16.15■□□□□ 0.18
PLXNB1-201ENST00000296440 GOLGA6L19H0YKK7 550 aa16.15■□□□□ 0.18
PLXNB1-201ENST00000296440 HOOK1Q9UJC3 728 aaKnown RBP16.15■□□□□ 0.18
PLXNB1-201ENST00000296440 EEA1Q15075 1411 aa16.15■□□□□ 0.18
PLXNB1-201ENST00000296440 RRP12Q5JTH9 1297 aaKnown RBP16.14■□□□□ 0.17
PLXNB1-201ENST00000296440 SLKQ9H2G2 1235 aaPredicted RBP16.14■□□□□ 0.17
PLXNB1-201ENST00000296440 CECR2Q9BXF3 1484 aa16.14■□□□□ 0.17
PLXNB1-201ENST00000296440 TCERG1O14776 1098 aaKnown RBP16.14■□□□□ 0.17
PLXNB1-201ENST00000296440 GRM1Q13255 1194 aa16.14■□□□□ 0.17
PLXNB1-201ENST00000296440 TNNT3P45378 269 aaPredicted RBP16.14■□□□□ 0.17
PLXNB1-201ENST00000296440 ESCO1Q5FWF5 840 aa16.14■□□□□ 0.17
PLXNB1-201ENST00000296440 WASHC4Q2M389 1173 aa16.13■□□□□ 0.17
PLXNB1-201ENST00000296440 BRMS1Q9HCU9 246 aa16.13■□□□□ 0.17
PLXNB1-201ENST00000296440 RDXP35241 583 aaKnown RBP16.12■□□□□ 0.17
PLXNB1-201ENST00000296440 ZSCAN29Q8IWY8 852 aaPredicted RBP16.12■□□□□ 0.17
PLXNB1-201ENST00000296440 PHF14O94880 888 aa16.12■□□□□ 0.17
PLXNB1-201ENST00000296440 RUFY2Q8WXA3 655 aa16.12■□□□□ 0.17
PLXNB1-201ENST00000296440 SAFBQ15424 915 aaKnown RBP eCLIP16.11■□□□□ 0.17
PLXNB1-201ENST00000296440 EVC2Q86UK5 1308 aa16.11■□□□□ 0.17
PLXNB1-201ENST00000296440 PLCD3Q8N3E9 789 aa16.11■□□□□ 0.17
PLXNB1-201ENST00000296440 BECN2A8MW95 431 aa16.11■□□□□ 0.17
PLXNB1-201ENST00000296440 FOXD4L6Q3SYB3 417 aaPredicted RBP16.11■□□□□ 0.17
PLXNB1-201ENST00000296440 FOXD4L3Q6VB84 417 aaPredicted RBP16.11■□□□□ 0.17
PLXNB1-201ENST00000296440 SLC3A2P08195 630 aaKnown RBP16.11■□□□□ 0.17
PLXNB1-201ENST00000296440 ANO2Q9NQ90 1003 aa16.11■□□□□ 0.17
PLXNB1-201ENST00000296440 RRP7AQ9Y3A4 280 aaKnown RBP16.11■□□□□ 0.17
PLXNB1-201ENST00000296440 FOSBP53539 338 aa16.1■□□□□ 0.17
PLXNB1-201ENST00000296440 NEBLO76041 1014 aa16.1■□□□□ 0.17
PLXNB1-201ENST00000296440 MATR3P43243 847 aaKnown RBP eCLIP16.1■□□□□ 0.176e-13■■□□□ 14.5
PLXNB1-201ENST00000296440 KDM4AO75164 1064 aa16.09■□□□□ 0.17
PLXNB1-201ENST00000296440 OFD1O75665 1012 aa16.09■□□□□ 0.17
PLXNB1-201ENST00000296440 GPRASP1Q5JY77 1395 aa16.09■□□□□ 0.17
PLXNB1-201ENST00000296440 SETQ01105 290 aaPredicted RBP16.09■□□□□ 0.17
PLXNB1-201ENST00000296440 CA8P35219 290 aa16.08■□□□□ 0.16
PLXNB1-201ENST00000296440 CDK5RAP3Q96JB5 506 aa16.08■□□□□ 0.16
PLXNB1-201ENST00000296440 RALYLQ86SE5 291 aaKnown RBP16.08■□□□□ 0.16
PLXNB1-201ENST00000296440 DDX54Q8TDD1 881 aaKnown RBP16.07■□□□□ 0.16
PLXNB1-201ENST00000296440 ARHGAP35Q9NRY4 1499 aa16.07■□□□□ 0.16
PLXNB1-201ENST00000296440 CEP162Q5TB80 1403 aa16.07■□□□□ 0.16
PLXNB1-201ENST00000296440 TOM1L2Q6ZVM7 507 aa16.07■□□□□ 0.16
PLXNB1-201ENST00000296440 SYCP1Q15431 976 aa16.07■□□□□ 0.16
PLXNB1-201ENST00000296440 XBP1P17861 261 aa16.07■□□□□ 0.16
PLXNB1-201ENST00000296440 SOGA1O94964 1423 aa16.06■□□□□ 0.16
PLXNB1-201ENST00000296440 NOP58Q9Y2X3 529 aaKnown RBP16.06■□□□□ 0.16
PLXNB1-201ENST00000296440 ZKSCAN1P17029 563 aaPredicted RBP16.06■□□□□ 0.16
PLXNB1-201ENST00000296440 KRT18P05783 430 aaKnown RBP16.06■□□□□ 0.16
PLXNB1-201ENST00000296440 TBC1D2BQ9UPU7 963 aa16.06■□□□□ 0.16
PLXNB1-201ENST00000296440 CEP164Q9UPV0 1460 aa16.06■□□□□ 0.16
PLXNB1-201ENST00000296440 ANKRD45Q5TZF3 282 aa16.06■□□□□ 0.16
PLXNB1-201ENST00000296440 HMGB2P26583 209 aaKnown RBP16.06■□□□□ 0.16
PLXNB1-201ENST00000296440 WDR78Q5VTH9 848 aa16.05■□□□□ 0.16
PLXNB1-201ENST00000296440 CENPJQ9HC77 1338 aaPredicted RBP16.05■□□□□ 0.16
PLXNB1-201ENST00000296440 UACAQ9BZF9 1416 aa16.05■□□□□ 0.16
PLXNB1-201ENST00000296440 GNL3LQ9NVN8 582 aaKnown RBP16.05■□□□□ 0.16
PLXNB1-201ENST00000296440 FKBP5Q13451 457 aaPredicted RBP16.05■□□□□ 0.16
PLXNB1-201ENST00000296440 AK7Q96M32 723 aa16.04■□□□□ 0.16
PLXNB1-201ENST00000296440 MAP3K9P80192 1104 aa16.04■□□□□ 0.16
PLXNB1-201ENST00000296440 CNNM1Q9NRU3 951 aa16.04■□□□□ 0.16
PLXNB1-201ENST00000296440 ABTB2Q8N961 1025 aa16.04■□□□□ 0.16
PLXNB1-201ENST00000296440 CGNL1Q0VF96 1302 aa16.04■□□□□ 0.16
PLXNB1-201ENST00000296440 HSPA5P11021 654 aaKnown RBP16.04■□□□□ 0.16
PLXNB1-201ENST00000296440 TRIM21P19474 475 aaKnown RBP16.04■□□□□ 0.16
PLXNB1-201ENST00000296440 TDRD9Q8NDG6 1382 aaKnown RBP16.04■□□□□ 0.16
PLXNB1-201ENST00000296440 RALBP1Q15311 655 aa16.04■□□□□ 0.16
PLXNB1-201ENST00000296440 SCLT1Q96NL6 688 aa16.03■□□□□ 0.16
PLXNB1-201ENST00000296440 RNF20Q5VTR2 975 aa16.03■□□□□ 0.16
PLXNB1-201ENST00000296440 RSPH4AQ5TD94 716 aa16.03■□□□□ 0.16
PLXNB1-201ENST00000296440 TSPYL4Q9UJ04 414 aa16.03■□□□□ 0.16
PLXNB1-201ENST00000296440 TMOD2Q9NZR1 351 aa16.03■□□□□ 0.16
PLXNB1-201ENST00000296440 RCAN3Q9UKA8 241 aa16.03■□□□□ 0.16
PLXNB1-201ENST00000296440 JPH4Q96JJ6 628 aa16.02■□□□□ 0.16
PLXNB1-201ENST00000296440 PDCL3Q9H2J4 239 aa16.02■□□□□ 0.15
PLXNB1-201ENST00000296440 BICDL1Q6ZP65 573 aa16.02■□□□□ 0.15
PLXNB1-201ENST00000296440 ATP6V1DQ9Y5K8 247 aa16.01■□□□□ 0.15
PLXNB1-201ENST00000296440 SART3Q15020 963 aaKnown RBP16.01■□□□□ 0.15
PLXNB1-201ENST00000296440 CCDC173Q0VFZ6 552 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms