RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 PIP4K2AP48426 406 aaPredicted RBP4.95□□□□□ -1.62
SCN3A-201ENST00000283254 MYO6Q9UM54 1294 aa4.95□□□□□ -1.62
SCN3A-201ENST00000283254 IFIT2P09913 472 aaKnown RBP4.95□□□□□ -1.62
SCN3A-201ENST00000283254 ATF3P18847 181 aa4.95□□□□□ -1.62
SCN3A-201ENST00000283254 MPHOSPH9Q99550 1183 aa4.95□□□□□ -1.62
SCN3A-201ENST00000283254 GPRASP1Q5JY77 1395 aa4.95□□□□□ -1.62
SCN3A-201ENST00000283254 LTV1Q96GA3 475 aaPredicted RBP4.95□□□□□ -1.62
SCN3A-201ENST00000283254 CADPSQ9ULU8 1353 aa4.95□□□□□ -1.62
SCN3A-201ENST00000283254 SCAPERQ9BY12 1400 aa4.95□□□□□ -1.62
SCN3A-201ENST00000283254 E9PSI1 815 aa4.95□□□□□ -1.62
SCN3A-201ENST00000283254 WWC2Q6AWC2 1192 aa4.95□□□□□ -1.62
SCN3A-201ENST00000283254 CCAR1Q8IX12 1150 aaKnown RBP4.95□□□□□ -1.62
SCN3A-201ENST00000283254 OSCARQ8IYS5 282 aa4.95□□□□□ -1.62
SCN3A-201ENST00000283254 SLKQ9H2G2 1235 aaPredicted RBP4.95□□□□□ -1.62
SCN3A-201ENST00000283254 ACBD3Q9H3P7 528 aa4.95□□□□□ -1.62
SCN3A-201ENST00000283254 TDRD9Q8NDG6 1382 aaKnown RBP4.95□□□□□ -1.62
SCN3A-201ENST00000283254 G3BP1Q13283 466 aaKnown RBP eCLIP4.95□□□□□ -1.62
SCN3A-201ENST00000283254 RALYLQ86SE5 291 aaKnown RBP4.95□□□□□ -1.62
SCN3A-201ENST00000283254 SLC3A2P08195 630 aaKnown RBP4.95□□□□□ -1.62
SCN3A-201ENST00000283254 DDX19BQ9UMR2 479 aa4.95□□□□□ -1.62
SCN3A-201ENST00000283254 MYBBP1AQ9BQG0 1328 aaKnown RBP4.95□□□□□ -1.62
SCN3A-201ENST00000283254 RAD21O60216 631 aa4.95□□□□□ -1.62
SCN3A-201ENST00000283254 RRP12Q5JTH9 1297 aaKnown RBP4.94□□□□□ -1.62
SCN3A-201ENST00000283254 B4GALNT3Q6L9W6 998 aa4.94□□□□□ -1.62
SCN3A-201ENST00000283254 CECR2Q9BXF3 1484 aa4.94□□□□□ -1.62
SCN3A-201ENST00000283254 SMG6Q86US8 1419 aaKnown RBP4.94□□□□□ -1.62
SCN3A-201ENST00000283254 APPP05067 770 aa4.94□□□□□ -1.62
SCN3A-201ENST00000283254 SF3B2Q13435 895 aaKnown RBP4.94□□□□□ -1.62
SCN3A-201ENST00000283254 DCTN1Q14203 1278 aa4.94□□□□□ -1.62
SCN3A-201ENST00000283254 DHX8Q14562 1220 aaKnown RBP4.94□□□□□ -1.62
SCN3A-201ENST00000283254 WDHD1O75717 1129 aaPredicted RBP4.94□□□□□ -1.62
SCN3A-201ENST00000283254 MCTP1Q6DN14 999 aa4.94□□□□□ -1.62
SCN3A-201ENST00000283254 CCDC73Q6ZRK6 1079 aa4.94□□□□□ -1.62
SCN3A-201ENST00000283254 PAF1Q8N7H5 531 aa4.94□□□□□ -1.62
SCN3A-201ENST00000283254 GNL3LQ9NVN8 582 aaKnown RBP4.94□□□□□ -1.62
SCN3A-201ENST00000283254 OFD1O75665 1012 aa4.93□□□□□ -1.62
SCN3A-201ENST00000283254 PSME1Q06323 249 aa4.93□□□□□ -1.62
SCN3A-201ENST00000283254 SYTL4Q96C24 671 aaPredicted RBP4.93□□□□□ -1.62
SCN3A-201ENST00000283254 NAT10Q9H0A0 1025 aaKnown RBP4.93□□□□□ -1.62
SCN3A-201ENST00000283254 TXLNBQ8N3L3 684 aa4.93□□□□□ -1.62
SCN3A-201ENST00000283254 GNAI1P63096 354 aa4.93□□□□□ -1.62
SCN3A-201ENST00000283254 NFXL1Q6ZNB6 911 aa4.93□□□□□ -1.62
SCN3A-201ENST00000283254 PCMTD1Q96MG8 357 aaPredicted RBP4.93□□□□□ -1.62
SCN3A-201ENST00000283254 RAB3GAP2Q9H2M9 1393 aa4.93□□□□□ -1.62
SCN3A-201ENST00000283254 ZRSR2Q15696 482 aaKnown RBP4.93□□□□□ -1.62
SCN3A-201ENST00000283254 SPRYD3Q8NCJ5 442 aa4.93□□□□□ -1.62
SCN3A-201ENST00000283254 TBC1D2BQ9UPU7 963 aa4.93□□□□□ -1.62
SCN3A-201ENST00000283254 TRIM21P19474 475 aaKnown RBP4.92□□□□□ -1.62
SCN3A-201ENST00000283254 NINLQ9Y2I6 1382 aa4.92□□□□□ -1.62
SCN3A-201ENST00000283254 CENPQQ7L2Z9 268 aaPredicted RBP4.92□□□□□ -1.62
SCN3A-201ENST00000283254 AK7Q96M32 723 aa4.92□□□□□ -1.62
SCN3A-201ENST00000283254 KIF7Q2M1P5 1343 aa4.92□□□□□ -1.62
SCN3A-201ENST00000283254 RUFY1Q96T51 708 aa4.92□□□□□ -1.62
SCN3A-201ENST00000283254 SENP3-EIF4A1A0A087X0R7 540 aa4.92□□□□□ -1.62
SCN3A-201ENST00000283254 EPS15P42566 896 aa4.92□□□□□ -1.62
SCN3A-201ENST00000283254 ARGLU1Q9NWB6 273 aaPredicted RBP4.92□□□□□ -1.62
SCN3A-201ENST00000283254 NLRP2Q9NX02 1062 aa4.92□□□□□ -1.62
SCN3A-201ENST00000283254 MYOM3Q5VTT5 1437 aa4.92□□□□□ -1.62
SCN3A-201ENST00000283254 PDCP20941 246 aa4.92□□□□□ -1.62
SCN3A-201ENST00000283254 KLHL34Q8N239 644 aa4.92□□□□□ -1.62
SCN3A-201ENST00000283254 DESP17661 470 aa4.92□□□□□ -1.62
SCN3A-201ENST00000283254 HSP90B2PQ58FF3 399 aa4.92□□□□□ -1.62
SCN3A-201ENST00000283254 LUC7LQ9NQ29 371 aaKnown RBP4.92□□□□□ -1.62
SCN3A-201ENST00000283254 DHX57Q6P158 1386 aaKnown RBP4.92□□□□□ -1.62
SCN3A-201ENST00000283254 DIAPH1O60610 1272 aaKnown RBP4.91□□□□□ -1.62
SCN3A-201ENST00000283254 FKBP5Q13451 457 aaPredicted RBP4.91□□□□□ -1.62
SCN3A-201ENST00000283254 FBXW7Q969H0 707 aa4.91□□□□□ -1.62
SCN3A-201ENST00000283254 CLUAP1Q96AJ1 413 aa4.91□□□□□ -1.62
SCN3A-201ENST00000283254 TXLNAP40222 546 aa4.91□□□□□ -1.62
SCN3A-201ENST00000283254 POGZQ7Z3K3 1410 aa4.91□□□□□ -1.62
SCN3A-201ENST00000283254 CUX1P39880 1505 aa4.91□□□□□ -1.62
SCN3A-201ENST00000283254 TEX35Q5T0J7 233 aa4.91□□□□□ -1.62
SCN3A-201ENST00000283254 DNAI2Q9GZS0 605 aa4.91□□□□□ -1.62
SCN3A-201ENST00000283254 NOL8Q76FK4 1167 aaKnown RBP4.91□□□□□ -1.62
SCN3A-201ENST00000283254 CCAR2Q8N163 923 aaKnown RBP4.91□□□□□ -1.62
SCN3A-201ENST00000283254 PHF23Q9BUL5 403 aaPredicted RBP4.91□□□□□ -1.62
SCN3A-201ENST00000283254 TOP2AP11388 1531 aaKnown RBP4.91□□□□□ -1.62
SCN3A-201ENST00000283254 JMYQ8N9B5 988 aa4.91□□□□□ -1.62
SCN3A-201ENST00000283254 HIP1O00291 1037 aa4.91□□□□□ -1.62
SCN3A-201ENST00000283254 FHOD3Q2V2M9 1422 aa4.91□□□□□ -1.62
SCN3A-201ENST00000283254 RRBP1Q9P2E9 1410 aaKnown RBP4.91□□□□□ -1.62
SCN3A-201ENST00000283254 CCP110O43303 1012 aa4.9□□□□□ -1.62
SCN3A-201ENST00000283254 PSMA5P28066 241 aa4.9□□□□□ -1.62
SCN3A-201ENST00000283254 ANKRD18AQ8IVF6 992 aa4.9□□□□□ -1.62
SCN3A-201ENST00000283254 BICD2Q8TD16 824 aa4.9□□□□□ -1.62
SCN3A-201ENST00000283254 RILPL2Q969X0 211 aa4.9□□□□□ -1.62
SCN3A-201ENST00000283254 JPH4Q96JJ6 628 aa4.9□□□□□ -1.62
SCN3A-201ENST00000283254 ANO2Q9NQ90 1003 aa4.9□□□□□ -1.62
SCN3A-201ENST00000283254 USP47Q96K76 1375 aa4.9□□□□□ -1.62
SCN3A-201ENST00000283254 GZF1Q9H116 711 aaPredicted RBP4.9□□□□□ -1.62
SCN3A-201ENST00000283254 TRAK1Q9UPV9 953 aa4.9□□□□□ -1.63
SCN3A-201ENST00000283254 CCDC191Q8NCU4 936 aa4.9□□□□□ -1.63
SCN3A-201ENST00000283254 DDX49Q9Y6V7 483 aaKnown RBP4.9□□□□□ -1.63
SCN3A-201ENST00000283254 GNAI3P08754 354 aa4.89□□□□□ -1.63
SCN3A-201ENST00000283254 TMEM132AQ24JP5 1023 aa4.89□□□□□ -1.63
SCN3A-201ENST00000283254 L3MBTL2Q969R5 705 aa4.89□□□□□ -1.63
SCN3A-201ENST00000283254 EZRP15311 586 aaKnown RBP4.89□□□□□ -1.63
SCN3A-201ENST00000283254 ERCC4Q92889 916 aaPredicted RBP4.89□□□□□ -1.63
SCN3A-201ENST00000283254 NACAP1Q9BZK3 213 aa4.89□□□□□ -1.63
SCN3A-201ENST00000283254 FYCO1Q9BQS8 1478 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms