RNA–Protein interactions for RNA: ENST00000280551.10

SEC24D-201, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24D, Length 4,030 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-201ENST00000280551 ERVK-7P63135 1459 aa14.3□□□□□ -0.12
SEC24D-201ENST00000280551 SBNO2Q9Y2G9 1366 aa14.29□□□□□ -0.12
SEC24D-201ENST00000280551 USP32Q8NFA0 1604 aa14.29□□□□□ -0.12
SEC24D-201ENST00000280551 QRICH2Q9H0J4 1663 aa14.28□□□□□ -0.12
SEC24D-201ENST00000280551 KNDC1Q76NI1 1749 aa14.28□□□□□ -0.12
SEC24D-201ENST00000280551 KTN1Q86UP2 1357 aaKnown RBP14.27□□□□□ -0.13
SEC24D-201ENST00000280551 RPGRIP1LQ68CZ1 1315 aa14.27□□□□□ -0.13
SEC24D-201ENST00000280551 DDX10Q13206 875 aaKnown RBP14.26□□□□□ -0.13
SEC24D-201ENST00000280551 TESK2Q96S53 571 aa14.26□□□□□ -0.13
SEC24D-201ENST00000280551 ASXL1Q8IXJ9 1541 aa14.26□□□□□ -0.13
SEC24D-201ENST00000280551 RAPGEF3O95398 923 aa14.26□□□□□ -0.13
SEC24D-201ENST00000280551 DCAF11Q8TEB1 546 aa14.26□□□□□ -0.13
SEC24D-201ENST00000280551 CFAP65Q6ZU64 1925 aaKnown RBP14.26□□□□□ -0.13
SEC24D-201ENST00000280551 NRXN3Q9Y4C0 1643 aa14.26□□□□□ -0.13
SEC24D-201ENST00000280551 FAM69CQ0P6D2 419 aa14.24□□□□□ -0.13
SEC24D-201ENST00000280551 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.24□□□□□ -0.136e-7■■□□□ 14.5
SEC24D-201ENST00000280551 UBR1Q8IWV7 1749 aa14.24□□□□□ -0.13
SEC24D-201ENST00000280551 BCL11AQ9H165 835 aa14.22□□□□□ -0.13
SEC24D-201ENST00000280551 HIRIP3Q9BW71 556 aaPredicted RBP14.21□□□□□ -0.14
SEC24D-201ENST00000280551 CARD11Q9BXL7 1154 aa14.2□□□□□ -0.14
SEC24D-201ENST00000280551 INSRP06213 1382 aa14.19□□□□□ -0.14
SEC24D-201ENST00000280551 DLC1Q96QB1 1528 aa14.19□□□□□ -0.14
SEC24D-201ENST00000280551 C3P01024 1663 aa14.19□□□□□ -0.14
SEC24D-201ENST00000280551 CENPBP07199 599 aaPredicted RBP14.18□□□□□ -0.14
SEC24D-201ENST00000280551 NBPF1Q3BBV0 1214 aa14.18□□□□□ -0.14
SEC24D-201ENST00000280551 WASHC2CQ9Y4E1 1318 aa14.17□□□□□ -0.14
SEC24D-201ENST00000280551 DISP3Q9P2K9 1392 aa14.17□□□□□ -0.14
SEC24D-201ENST00000280551 FER1L4A9Z1Z3 1794 aa14.17□□□□□ -0.14
SEC24D-201ENST00000280551 PRKRIP1Q9H875 184 aaPredicted RBP14.16□□□□□ -0.14
SEC24D-201ENST00000280551 A2ML1A8K2U0 1454 aa14.16□□□□□ -0.14
SEC24D-201ENST00000280551 PARD3Q8TEW0 1356 aa14.16□□□□□ -0.14
SEC24D-201ENST00000280551 ST20-MTHFSA0A0A6YYL1 179 aa14.16□□□□□ -0.14
SEC24D-201ENST00000280551 ANKRD26Q9UPS8 1709 aa14.16□□□□□ -0.14
SEC24D-201ENST00000280551 NPC1L1Q9UHC9 1359 aa14.16□□□□□ -0.14
SEC24D-201ENST00000280551 ANP32CO43423 234 aa14.15□□□□□ -0.14
SEC24D-201ENST00000280551 SLC52A1Q9NWF4 448 aa14.15□□□□□ -0.14
SEC24D-201ENST00000280551 ALKQ9UM73 1620 aa14.15□□□□□ -0.14
SEC24D-201ENST00000280551 EIF3AQ14152 1382 aaKnown RBP14.14□□□□□ -0.15
SEC24D-201ENST00000280551 ZNF142P52746 1687 aaPredicted RBP14.14□□□□□ -0.15
SEC24D-201ENST00000280551 PER1O15534 1290 aaPredicted RBP14.13□□□□□ -0.15
SEC24D-201ENST00000280551 C14orf93Q9H972 538 aaKnown RBP14.13□□□□□ -0.15
SEC24D-201ENST00000280551 PTPRMP28827 1452 aa14.12□□□□□ -0.15
SEC24D-201ENST00000280551 ADGRF5Q8IZF2 1346 aa14.12□□□□□ -0.15
SEC24D-201ENST00000280551 PUS7Q96PZ0 661 aaKnown RBP14.11□□□□□ -0.15
SEC24D-201ENST00000280551 TULP4Q9NRJ4 1543 aa14.11□□□□□ -0.15
SEC24D-201ENST00000280551 YTHDC1Q96MU7 727 aaKnown RBP14.11□□□□□ -0.15
SEC24D-201ENST00000280551 SLC24A1O60721 1099 aa14.11□□□□□ -0.15
SEC24D-201ENST00000280551 LRPPRCP42704 1394 aaKnown RBP14.11□□□□□ -0.15
SEC24D-201ENST00000280551 ADAMTSL3P82987 1691 aa14.1□□□□□ -0.15
SEC24D-201ENST00000280551 CPS1P31327 1500 aa14.1□□□□□ -0.15
SEC24D-201ENST00000280551 RIMS1Q86UR5 1692 aaKnown RBP14.09□□□□□ -0.15
SEC24D-201ENST00000280551 SLIT1O75093 1534 aa14.09□□□□□ -0.15
SEC24D-201ENST00000280551 KDM2AQ9Y2K7 1162 aa14.09□□□□□ -0.15
SEC24D-201ENST00000280551 ADGRB2O60241 1585 aa14.09□□□□□ -0.15
SEC24D-201ENST00000280551 RGL3Q3MIN7 710 aa14.08□□□□□ -0.16
SEC24D-201ENST00000280551 SUPT16HQ9Y5B9 1047 aaKnown RBP14.07□□□□□ -0.16
SEC24D-201ENST00000280551 NLRP1Q9C000 1473 aa14.07□□□□□ -0.16
SEC24D-201ENST00000280551 ARHGAP23Q9P227 1491 aa14.07□□□□□ -0.16
SEC24D-201ENST00000280551 TECPR2O15040 1411 aa14.06□□□□□ -0.16
SEC24D-201ENST00000280551 MED14O60244 1454 aa14.06□□□□□ -0.16
SEC24D-201ENST00000280551 BRD4O60885 1362 aaPredicted RBP14.06□□□□□ -0.16
SEC24D-201ENST00000280551 GGT6Q6P531 493 aa14.06□□□□□ -0.16
SEC24D-201ENST00000280551 DIP2AQ14689 1571 aa14.05□□□□□ -0.16
SEC24D-201ENST00000280551 ERICH6Q7L0X2 663 aa14.05□□□□□ -0.16
SEC24D-201ENST00000280551 TOPAZ1Q8N9V7 1692 aa14.05□□□□□ -0.16
SEC24D-201ENST00000280551 IDI1Q13907 227 aa14.04□□□□□ -0.16
SEC24D-201ENST00000280551 SHPRHQ149N8 1683 aa14.04□□□□□ -0.16
SEC24D-201ENST00000280551 TMF1P82094 1093 aa14.03□□□□□ -0.16
SEC24D-201ENST00000280551 RALBP1Q15311 655 aa14.03□□□□□ -0.16
SEC24D-201ENST00000280551 AKAP12Q02952 1782 aa14.03□□□□□ -0.16
SEC24D-201ENST00000280551 ZMYM3Q14202 1370 aa14.02□□□□□ -0.17
SEC24D-201ENST00000280551 ZNF326Q5BKZ1 582 aaKnown RBP14.02□□□□□ -0.17
SEC24D-201ENST00000280551 KIF20BQ96Q89 1820 aa14.02□□□□□ -0.17
SEC24D-201ENST00000280551 BLMP54132 1417 aaPredicted RBP14□□□□□ -0.17
SEC24D-201ENST00000280551 MON2Q7Z3U7 1717 aa14□□□□□ -0.17
SEC24D-201ENST00000280551 VGFO15240 615 aaPredicted RBP14□□□□□ -0.17
SEC24D-201ENST00000280551 CFAP70Q5T0N1 1121 aa14□□□□□ -0.17
SEC24D-201ENST00000280551 XRN1Q8IZH2 1706 aaKnown RBP14□□□□□ -0.17
SEC24D-201ENST00000280551 CDCA8Q53HL2 280 aa13.99□□□□□ -0.17
SEC24D-201ENST00000280551 MYT1LQ9UL68 1186 aa13.99□□□□□ -0.17
SEC24D-201ENST00000280551 MYBBP1AQ9BQG0 1328 aaKnown RBP13.99□□□□□ -0.17
SEC24D-201ENST00000280551 NINLQ9Y2I6 1382 aa13.98□□□□□ -0.17
SEC24D-201ENST00000280551 CCDC184Q52MB2 194 aa13.98□□□□□ -0.17
SEC24D-201ENST00000280551 YTHDC2Q9H6S0 1430 aaKnown RBP13.98□□□□□ -0.17
SEC24D-201ENST00000280551 RIMS2Q9UQ26 1411 aa13.98□□□□□ -0.17
SEC24D-201ENST00000280551 USP54Q70EL1 1684 aa13.98□□□□□ -0.17
SEC24D-201ENST00000280551 NRKQ7Z2Y5 1582 aa13.98□□□□□ -0.17
SEC24D-201ENST00000280551 CD163L1Q9NR16 1453 aa13.97□□□□□ -0.17
SEC24D-201ENST00000280551 TSHZ2Q9NRE2 1034 aa13.96□□□□□ -0.17
SEC24D-201ENST00000280551 FAM135BQ49AJ0 1406 aa13.96□□□□□ -0.17
SEC24D-201ENST00000280551 AMER1Q5JTC6 1135 aaPredicted RBP13.95□□□□□ -0.18
SEC24D-201ENST00000280551 SIRT1Q96EB6 747 aa13.95□□□□□ -0.18
SEC24D-201ENST00000280551 ZBED9Q6R2W3 1325 aa13.95□□□□□ -0.18
SEC24D-201ENST00000280551 PNISRQ8TF01 805 aaKnown RBP13.94□□□□□ -0.18
SEC24D-201ENST00000280551 TNRQ92752 1358 aa13.94□□□□□ -0.18
SEC24D-201ENST00000280551 ABCC11Q96J66 1382 aa13.94□□□□□ -0.18
SEC24D-201ENST00000280551 CENPJQ9HC77 1338 aaPredicted RBP13.94□□□□□ -0.18
SEC24D-201ENST00000280551 CDC42BPGQ6DT37 1551 aa13.93□□□□□ -0.18
SEC24D-201ENST00000280551 ADAMTS13Q76LX8 1427 aa13.93□□□□□ -0.18
SEC24D-201ENST00000280551 FBXO31Q5XUX0 539 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms