RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 DNMBPQ6XZF7 1577 aa14.03□□□□□ -0.16
USP6NL-201ENST00000277575 HMOX1P09601 288 aa14.03□□□□□ -0.16
USP6NL-201ENST00000277575 RAPGEF3O95398 923 aa14.02□□□□□ -0.16
USP6NL-201ENST00000277575 CNTLNQ9NXG0 1405 aa14.02□□□□□ -0.16
USP6NL-201ENST00000277575 ATF3P18847 181 aa14.02□□□□□ -0.17
USP6NL-201ENST00000277575 PLEKHH2Q8IVE3 1493 aa14.02□□□□□ -0.17
USP6NL-201ENST00000277575 EHBP1L1Q8N3D4 1523 aa14.02□□□□□ -0.17
USP6NL-201ENST00000277575 MTHFSP49914 203 aa14.02□□□□□ -0.17
USP6NL-201ENST00000277575 NLRP6P59044 892 aa14.02□□□□□ -0.17
USP6NL-201ENST00000277575 NEXNQ0ZGT2 675 aa14.02□□□□□ -0.17
USP6NL-201ENST00000277575 IPO9Q96P70 1041 aaKnown RBP14.01□□□□□ -0.17
USP6NL-201ENST00000277575 API5Q9BZZ5 524 aaKnown RBP14.01□□□□□ -0.17
USP6NL-201ENST00000277575 KIAA0586Q9BVV6 1533 aa14.01□□□□□ -0.17
USP6NL-201ENST00000277575 L1TD1Q5T7N2 865 aaKnown RBP14.01□□□□□ -0.17
USP6NL-201ENST00000277575 DDX19BQ9UMR2 479 aa14.01□□□□□ -0.17
USP6NL-201ENST00000277575 FRAT2O75474 233 aaPredicted RBP14□□□□□ -0.17
USP6NL-201ENST00000277575 NECTIN2Q92692 538 aa14□□□□□ -0.17
USP6NL-201ENST00000277575 KIAA1107Q9UPP5 1409 aa14□□□□□ -0.17
USP6NL-201ENST00000277575 NBPF8Q3BBV2 869 aa14□□□□□ -0.17
USP6NL-201ENST00000277575 DZIP1LQ8IYY4 767 aaKnown RBP14□□□□□ -0.17
USP6NL-201ENST00000277575 SLC52A1Q9NWF4 448 aa14□□□□□ -0.17
USP6NL-201ENST00000277575 NUTM2GQ5VZR2 741 aa14□□□□□ -0.17
USP6NL-201ENST00000277575 C9orf78Q9NZ63 289 aaPredicted RBP13.99□□□□□ -0.17
USP6NL-201ENST00000277575 GNAI1P63096 354 aa13.99□□□□□ -0.17
USP6NL-201ENST00000277575 NOL8Q76FK4 1167 aaKnown RBP13.99□□□□□ -0.17
USP6NL-201ENST00000277575 GZF1Q9H116 711 aaPredicted RBP13.99□□□□□ -0.17
USP6NL-201ENST00000277575 RAPGEF4Q8WZA2 1011 aa13.99□□□□□ -0.17
USP6NL-201ENST00000277575 RTN4Q9NQC3 1192 aaKnown RBP13.99□□□□□ -0.17
USP6NL-201ENST00000277575 ADAMTS8Q9UP79 889 aa13.99□□□□□ -0.17
USP6NL-201ENST00000277575 RILPL2Q969X0 211 aa13.98□□□□□ -0.17
USP6NL-201ENST00000277575 PRAM1Q96QH2 718 aa13.98□□□□□ -0.17
USP6NL-201ENST00000277575 HTATSF1O43719 755 aaKnown RBP13.98□□□□□ -0.17
USP6NL-201ENST00000277575 FKBP5Q13451 457 aaPredicted RBP13.98□□□□□ -0.17
USP6NL-201ENST00000277575 PDE4AP27815 886 aa13.98□□□□□ -0.17
USP6NL-201ENST00000277575 ABCA10Q8WWZ4 1543 aa13.97□□□□□ -0.17
USP6NL-201ENST00000277575 FAM161AQ3B820 660 aa13.97□□□□□ -0.17
USP6NL-201ENST00000277575 ST18O60284 1047 aa13.97□□□□□ -0.17
USP6NL-201ENST00000277575 HSP90B1P14625 803 aaKnown RBP13.97□□□□□ -0.17
USP6NL-201ENST00000277575 PTMSP20962 102 aa13.97□□□□□ -0.17
USP6NL-201ENST00000277575 SLC12A5Q9H2X9 1139 aa13.97□□□□□ -0.17
USP6NL-201ENST00000277575 TSPYL4Q9UJ04 414 aa13.97□□□□□ -0.17
USP6NL-201ENST00000277575 NLRP2Q9NX02 1062 aa13.96□□□□□ -0.17
USP6NL-201ENST00000277575 TIAM1Q13009 1591 aa13.96□□□□□ -0.17
USP6NL-201ENST00000277575 BRD4O60885 1362 aaPredicted RBP13.96□□□□□ -0.17
USP6NL-201ENST00000277575 G3V3G9 751 aa13.96□□□□□ -0.17
USP6NL-201ENST00000277575 DCAF8Q5TAQ9 597 aa13.96□□□□□ -0.17
USP6NL-201ENST00000277575 NAP1L5Q96NT1 182 aaPredicted RBP13.96□□□□□ -0.17
USP6NL-201ENST00000277575 TOMM22Q9NS69 142 aa13.96□□□□□ -0.17
USP6NL-201ENST00000277575 SYTL4Q96C24 671 aaPredicted RBP13.96□□□□□ -0.17
USP6NL-201ENST00000277575 FOXD4L1Q9NU39 408 aa13.96□□□□□ -0.17
USP6NL-201ENST00000277575 DEKP35659 375 aaKnown RBP13.95□□□□□ -0.18
USP6NL-201ENST00000277575 DRC7Q8IY82 874 aa13.95□□□□□ -0.18
USP6NL-201ENST00000277575 TCP11L2Q8N4U5 519 aa13.95□□□□□ -0.18
USP6NL-201ENST00000277575 DDX58O95786 925 aaKnown RBP13.95□□□□□ -0.18
USP6NL-201ENST00000277575 THEMISQ8N1K5 641 aaPredicted RBP13.95□□□□□ -0.18
USP6NL-201ENST00000277575 KIF16BQ96L93 1317 aa13.95□□□□□ -0.18
USP6NL-201ENST00000277575 DAPK1P53355 1430 aa13.94□□□□□ -0.18
USP6NL-201ENST00000277575 HECW1Q76N89 1606 aa13.94□□□□□ -0.18
USP6NL-201ENST00000277575 EPRSP07814 1512 aaKnown RBP13.94□□□□□ -0.18
USP6NL-201ENST00000277575 PPP2R1AP30153 589 aa13.94□□□□□ -0.18
USP6NL-201ENST00000277575 ABTB2Q8N961 1025 aa13.93□□□□□ -0.18
USP6NL-201ENST00000277575 SYAP1Q96A49 352 aaPredicted RBP13.93□□□□□ -0.18
USP6NL-201ENST00000277575 PROSER2Q86WR7 435 aaPredicted RBP13.93□□□□□ -0.18
USP6NL-201ENST00000277575 MSNP26038 577 aaKnown RBP13.93□□□□□ -0.18
USP6NL-201ENST00000277575 CDK13Q14004 1512 aaKnown RBP13.92□□□□□ -0.18
USP6NL-201ENST00000277575 ESCO1Q5FWF5 840 aa13.91□□□□□ -0.18
USP6NL-201ENST00000277575 GPRASP1Q5JY77 1395 aa13.91□□□□□ -0.18
USP6NL-201ENST00000277575 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.91□□□□□ -0.18
USP6NL-201ENST00000277575 DIAPH3Q9NSV4 1193 aa13.91□□□□□ -0.18
USP6NL-201ENST00000277575 LAMC3Q9Y6N6 1575 aa13.91□□□□□ -0.18
USP6NL-201ENST00000277575 KIF3AQ9Y496 699 aa13.91□□□□□ -0.18
USP6NL-201ENST00000277575 CABP1Q9NZU7 370 aa13.9□□□□□ -0.18
USP6NL-201ENST00000277575 PRKAR2BP31323 418 aa13.9□□□□□ -0.18
USP6NL-201ENST00000277575 SLC26A8Q96RN1 970 aa13.9□□□□□ -0.18
USP6NL-201ENST00000277575 ROCK1Q13464 1354 aa13.89□□□□□ -0.19
USP6NL-201ENST00000277575 CHAF1AQ13111 956 aaPredicted RBP13.89□□□□□ -0.19
USP6NL-201ENST00000277575 CDCA7LQ96GN5 454 aa13.89□□□□□ -0.19
USP6NL-201ENST00000277575 CDK19Q9BWU1 502 aa13.89□□□□□ -0.19
USP6NL-201ENST00000277575 NAIPQ13075 1403 aa13.89□□□□□ -0.19
USP6NL-201ENST00000277575 PANK1Q8TE04 598 aa13.89□□□□□ -0.19
USP6NL-201ENST00000277575 IFIT2P09913 472 aaKnown RBP13.89□□□□□ -0.19
USP6NL-201ENST00000277575 CCDC34Q96HJ3 373 aa13.89□□□□□ -0.19
USP6NL-201ENST00000277575 IQGAP2Q13576 1575 aa13.88□□□□□ -0.19
USP6NL-201ENST00000277575 REC8O95072 547 aa13.88□□□□□ -0.19
USP6NL-201ENST00000277575 ANKRD30BQ9BXX2 1392 aa13.88□□□□□ -0.19
USP6NL-201ENST00000277575 MSH5O43196 834 aa13.87□□□□□ -0.19
USP6NL-201ENST00000277575 G3BP1Q13283 466 aaKnown RBP eCLIP13.87□□□□□ -0.19
USP6NL-201ENST00000277575 RUFY2Q8WXA3 655 aa13.87□□□□□ -0.19
USP6NL-201ENST00000277575 RPGRIP1LQ68CZ1 1315 aa13.87□□□□□ -0.19
USP6NL-201ENST00000277575 CLSTN1O94985 981 aa13.87□□□□□ -0.19
USP6NL-201ENST00000277575 LRRFIP1Q32MZ4 808 aaKnown RBP13.87□□□□□ -0.19
USP6NL-201ENST00000277575 ZNF692Q9BU19 519 aaPredicted RBP13.87□□□□□ -0.19
USP6NL-201ENST00000277575 LNPKQ9C0E8 428 aa13.87□□□□□ -0.19
USP6NL-201ENST00000277575 SLC4A3P48751 1232 aa13.87□□□□□ -0.19
USP6NL-201ENST00000277575 CSPP1Q1MSJ5 1256 aa13.87□□□□□ -0.19
USP6NL-201ENST00000277575 FOXD4L5Q5VV16 416 aaPredicted RBP13.87□□□□□ -0.19
USP6NL-201ENST00000277575 FOXD4L4Q8WXT5 416 aaPredicted RBP13.87□□□□□ -0.19
USP6NL-201ENST00000277575 ARHGEF11O15085 1522 aa13.87□□□□□ -0.19
USP6NL-201ENST00000277575 PLB1Q6P1J6 1458 aa13.87□□□□□ -0.19
USP6NL-201ENST00000277575 GAS2L2Q8NHY3 880 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms