RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 ANP32CO43423 234 aa28.61■■■□□ 2.17
LYSMD2-201ENST00000267838 PPLO60437 1756 aa28.61■■■□□ 2.17
LYSMD2-201ENST00000267838 MLECQ14165 292 aa28.6■■■□□ 2.17
LYSMD2-201ENST00000267838 YTHDC1Q96MU7 727 aaKnown RBP28.6■■■□□ 2.17
LYSMD2-201ENST00000267838 NRXN1Q9ULB1 1477 aa28.59■■■□□ 2.17
LYSMD2-201ENST00000267838 SLC52A1Q9NWF4 448 aa28.58■■■□□ 2.17
LYSMD2-201ENST00000267838 ERVK-7P63135 1459 aa28.57■■■□□ 2.16
LYSMD2-201ENST00000267838 RPGRIP1LQ68CZ1 1315 aa28.57■■■□□ 2.16
LYSMD2-201ENST00000267838 ADGRF5Q8IZF2 1346 aa28.57■■■□□ 2.16
LYSMD2-201ENST00000267838 IQGAP1P46940 1657 aa28.56■■■□□ 2.16
LYSMD2-201ENST00000267838 IDI1Q13907 227 aa28.55■■■□□ 2.16
LYSMD2-201ENST00000267838 FBXO31Q5XUX0 539 aaPredicted RBP28.53■■■□□ 2.16
LYSMD2-201ENST00000267838 SCAF11Q99590 1463 aaKnown RBP28.5■■■□□ 2.15
LYSMD2-201ENST00000267838 SPATA31D1Q6ZQQ2 1576 aa28.5■■■□□ 2.15
LYSMD2-201ENST00000267838 NEXMIFQ5QGS0 1516 aa28.49■■■□□ 2.15
LYSMD2-201ENST00000267838 TMEM131LA2VDJ0 1609 aa28.49■■■□□ 2.15
LYSMD2-201ENST00000267838 POLR3GLQ9BT43 218 aa28.49■■■□□ 2.15
LYSMD2-201ENST00000267838 CFAP70Q5T0N1 1121 aa28.48■■■□□ 2.15
LYSMD2-201ENST00000267838 ESF1Q9H501 851 aaKnown RBP28.48■■■□□ 2.15
LYSMD2-201ENST00000267838 MYO5BQ9ULV0 1848 aa28.47■■■□□ 2.15
LYSMD2-201ENST00000267838 PIK3C2GO75747 1445 aa28.47■■■□□ 2.15
LYSMD2-201ENST00000267838 CCER2I3L3R5 266 aa28.47■■■□□ 2.15
LYSMD2-201ENST00000267838 TESK2Q96S53 571 aa28.46■■■□□ 2.15
LYSMD2-201ENST00000267838 SETBP1Q9Y6X0 1596 aa28.43■■■□□ 2.14
LYSMD2-201ENST00000267838 ZMYM3Q14202 1370 aa28.43■■■□□ 2.14
LYSMD2-201ENST00000267838 VGFO15240 615 aaPredicted RBP28.42■■■□□ 2.14
LYSMD2-201ENST00000267838 EIF3AQ14152 1382 aaKnown RBP28.41■■■□□ 2.14
LYSMD2-201ENST00000267838 C14orf93Q9H972 538 aaKnown RBP28.39■■■□□ 2.14
LYSMD2-201ENST00000267838 ZFYVE9O95405 1425 aa28.39■■■□□ 2.13
LYSMD2-201ENST00000267838 DISP3Q9P2K9 1392 aa28.39■■■□□ 2.13
LYSMD2-201ENST00000267838 TMF1P82094 1093 aa28.38■■■□□ 2.13
LYSMD2-201ENST00000267838 NUTM2DQ5VT03 806 aaPredicted RBP28.35■■■□□ 2.13
LYSMD2-201ENST00000267838 STAG3Q9UJ98 1225 aa28.34■■■□□ 2.13
LYSMD2-201ENST00000267838 ADGRB1O14514 1584 aa28.34■■■□□ 2.13
LYSMD2-201ENST00000267838 PRKRIP1Q9H875 184 aaPredicted RBP28.32■■■□□ 2.12
LYSMD2-201ENST00000267838 A2ML1A8K2U0 1454 aa28.31■■■□□ 2.12
LYSMD2-201ENST00000267838 MYO3AQ8NEV4 1616 aa28.3■■■□□ 2.12
LYSMD2-201ENST00000267838 TNRQ92752 1358 aa28.27■■■□□ 2.12
LYSMD2-201ENST00000267838 TMEM132EQ6IEE7 984 aa28.24■■■□□ 2.11
LYSMD2-201ENST00000267838 FER1L4A9Z1Z3 1794 aa28.24■■■□□ 2.11
LYSMD2-201ENST00000267838 SLC24A1O60721 1099 aa28.24■■■□□ 2.11
LYSMD2-201ENST00000267838 CDCA8Q53HL2 280 aa28.24■■■□□ 2.11
LYSMD2-201ENST00000267838 TRAK1Q9UPV9 953 aa28.21■■■□□ 2.11
LYSMD2-201ENST00000267838 RIMS2Q9UQ26 1411 aa28.21■■■□□ 2.11
LYSMD2-201ENST00000267838 SBNO2Q9Y2G9 1366 aa28.2■■■□□ 2.11
LYSMD2-201ENST00000267838 KDM5AP29375 1690 aaKnown RBP28.2■■■□□ 2.1
LYSMD2-201ENST00000267838 CENPJQ9HC77 1338 aaPredicted RBP28.19■■■□□ 2.1
LYSMD2-201ENST00000267838 C3P01024 1663 aa28.19■■■□□ 2.1
LYSMD2-201ENST00000267838 ASXL1Q8IXJ9 1541 aa28.18■■■□□ 2.1
LYSMD2-201ENST00000267838 QRICH2Q9H0J4 1663 aa28.18■■■□□ 2.1
LYSMD2-201ENST00000267838 ARHGEF28Q8N1W1 1705 aaKnown RBP28.17■■■□□ 2.1
LYSMD2-201ENST00000267838 ALKQ9UM73 1620 aa28.16■■■□□ 2.1
LYSMD2-201ENST00000267838 UBR1Q8IWV7 1749 aa28.15■■■□□ 2.1
LYSMD2-201ENST00000267838 CEBPAP49715 358 aaPredicted RBP28.14■■■□□ 2.09
LYSMD2-201ENST00000267838 PANK3Q9H999 370 aa28.13■■■□□ 2.09
LYSMD2-201ENST00000267838 NLRP1Q9C000 1473 aa28.13■■■□□ 2.09
LYSMD2-201ENST00000267838 PER1O15534 1290 aaPredicted RBP28.12■■■□□ 2.09
LYSMD2-201ENST00000267838 SENP3Q9H4L4 574 aaPredicted RBP28.12■■■□□ 2.09
LYSMD2-201ENST00000267838 MYOM1P52179 1685 aa28.12■■■□□ 2.09
LYSMD2-201ENST00000267838 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.11■■■□□ 2.09
LYSMD2-201ENST00000267838 CNGB1Q14028 1251 aaPredicted RBP28.11■■■□□ 2.09
LYSMD2-201ENST00000267838 CCDC184Q52MB2 194 aa28.11■■■□□ 2.09
LYSMD2-201ENST00000267838 KTN1Q86UP2 1357 aaKnown RBP28.1■■■□□ 2.09
LYSMD2-201ENST00000267838 HDGFP51858 240 aaKnown RBP28.07■■■□□ 2.08
LYSMD2-201ENST00000267838 MRS2Q9HD23 443 aa28.07■■■□□ 2.08
LYSMD2-201ENST00000267838 YTHDC2Q9H6S0 1430 aaKnown RBP28.07■■■□□ 2.08
LYSMD2-201ENST00000267838 SETD1AO15047 1707 aaKnown RBP28.06■■■□□ 2.08
LYSMD2-201ENST00000267838 RALBP1Q15311 655 aa28.06■■■□□ 2.08
LYSMD2-201ENST00000267838 TMEM2Q9UHN6 1383 aa28.05■■■□□ 2.08
LYSMD2-201ENST00000267838 NRXN3Q9Y4C0 1643 aa28.04■■■□□ 2.08
LYSMD2-201ENST00000267838 STK26Q9P289 416 aa28.04■■■□□ 2.08
LYSMD2-201ENST00000267838 PTPRMP28827 1452 aa28.04■■■□□ 2.08
LYSMD2-201ENST00000267838 PARD3Q8TEW0 1356 aa28.01■■■□□ 2.07
LYSMD2-201ENST00000267838 PLPPR3Q6T4P5 718 aa28.01■■■□□ 2.07
LYSMD2-201ENST00000267838 RIMS1Q86UR5 1692 aaKnown RBP28■■■□□ 2.07
LYSMD2-201ENST00000267838 MYBBP1AQ9BQG0 1328 aaKnown RBP27.99■■■□□ 2.07
LYSMD2-201ENST00000267838 TULP4Q9NRJ4 1543 aa27.97■■■□□ 2.07
LYSMD2-201ENST00000267838 EVC2Q86UK5 1308 aa27.97■■■□□ 2.07
LYSMD2-201ENST00000267838 KNSTRNQ9Y448 316 aa27.96■■■□□ 2.07
LYSMD2-201ENST00000267838 ADAMTSL3P82987 1691 aa27.96■■■□□ 2.07
LYSMD2-201ENST00000267838 DLC1Q96QB1 1528 aa27.96■■■□□ 2.07
LYSMD2-201ENST00000267838 LRPPRCP42704 1394 aaKnown RBP27.95■■■□□ 2.07
LYSMD2-201ENST00000267838 CC2D1BQ5T0F9 858 aaKnown RBP27.94■■■□□ 2.06
LYSMD2-201ENST00000267838 PUS7Q96PZ0 661 aaKnown RBP27.94■■■□□ 2.06
LYSMD2-201ENST00000267838 PRAM1Q96QH2 718 aa27.94■■■□□ 2.06
LYSMD2-201ENST00000267838 SAFB2Q14151 953 aaKnown RBP eCLIP27.93■■■□□ 2.06
LYSMD2-201ENST00000267838 FAM9BQ8IZU0 186 aa27.93■■■□□ 2.06
LYSMD2-201ENST00000267838 POGKQ9P215 609 aa27.93■■■□□ 2.06
LYSMD2-201ENST00000267838 BRD4O60885 1362 aaPredicted RBP27.92■■■□□ 2.06
LYSMD2-201ENST00000267838 SLIT1O75093 1534 aa27.92■■■□□ 2.06
LYSMD2-201ENST00000267838 ARHGAP23Q9P227 1491 aa27.91■■■□□ 2.06
LYSMD2-201ENST00000267838 METP08581 1390 aa27.9■■■□□ 2.06
LYSMD2-201ENST00000267838 ABCC11Q96J66 1382 aa27.9■■■□□ 2.06
LYSMD2-201ENST00000267838 PLEKHG1Q9ULL1 1385 aa27.9■■■□□ 2.06
LYSMD2-201ENST00000267838 AMER1Q5JTC6 1135 aaPredicted RBP27.89■■■□□ 2.06
LYSMD2-201ENST00000267838 TMC1Q8TDI8 760 aa27.89■■■□□ 2.06
LYSMD2-201ENST00000267838 LTKP29376 864 aa27.88■■■□□ 2.05
LYSMD2-201ENST00000267838 BCANQ96GW7 911 aa27.88■■■□□ 2.05
LYSMD2-201ENST00000267838 SUPT16HQ9Y5B9 1047 aaKnown RBP27.88■■■□□ 2.05
LYSMD2-201ENST00000267838 NPC1L1Q9UHC9 1359 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms