RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 TRAPPC8Q9Y2L5 1435 aa22.07■■□□□ 1.12
RTN1-201ENST00000267484 DMRT2Q9Y5R5 561 aa22.07■■□□□ 1.12
RTN1-201ENST00000267484 SLFN5Q08AF3 891 aa22.07■■□□□ 1.12
RTN1-201ENST00000267484 C8orf34Q49A92 452 aa22.06■■□□□ 1.12
RTN1-201ENST00000267484 DDRGK1Q96HY6 314 aa22.06■■□□□ 1.12
RTN1-201ENST00000267484 PLXNC1O60486 1568 aa22.05■■□□□ 1.12
RTN1-201ENST00000267484 ATP10AO60312 1499 aa22.05■■□□□ 1.12
RTN1-201ENST00000267484 EFCAB2Q5VUJ9 269 aa22.04■■□□□ 1.12
RTN1-201ENST00000267484 RNF17Q9BXT8 1623 aaKnown RBP22.04■■□□□ 1.12
RTN1-201ENST00000267484 USP35Q9P2H5 1018 aa22.03■■□□□ 1.12
RTN1-201ENST00000267484 FAM161AQ3B820 660 aa22.03■■□□□ 1.12
RTN1-201ENST00000267484 NFKBIBQ15653 356 aa22.02■■□□□ 1.12
RTN1-201ENST00000267484 DAXXQ9UER7 740 aaPredicted RBP22.02■■□□□ 1.12
RTN1-201ENST00000267484 MADDQ8WXG6 1647 aa22.02■■□□□ 1.12
RTN1-201ENST00000267484 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.01■■□□□ 1.11
RTN1-201ENST00000267484 CFAP70Q5T0N1 1121 aa22.01■■□□□ 1.11
RTN1-201ENST00000267484 SPAG9O60271 1321 aaKnown RBP22■■□□□ 1.11
RTN1-201ENST00000267484 CDCA8Q53HL2 280 aa22■■□□□ 1.11
RTN1-201ENST00000267484 ASXL1Q8IXJ9 1541 aa22■■□□□ 1.11
RTN1-201ENST00000267484 SCAF11Q99590 1463 aaKnown RBP21.99■■□□□ 1.11
RTN1-201ENST00000267484 PLCH2O75038 1416 aa21.98■■□□□ 1.11
RTN1-201ENST00000267484 TNNT2P45379 298 aaPredicted RBP21.97■■□□□ 1.11
RTN1-201ENST00000267484 CARD14Q9BXL6 1004 aa21.97■■□□□ 1.11
RTN1-201ENST00000267484 IQGAP1P46940 1657 aa21.97■■□□□ 1.11
RTN1-201ENST00000267484 IGHDP01880 384 aa21.97■■□□□ 1.11
RTN1-201ENST00000267484 NEUROD2Q15784 382 aa21.97■■□□□ 1.11
RTN1-201ENST00000267484 CHD1O14646 1710 aa21.96■■□□□ 1.11
RTN1-201ENST00000267484 TRMT2AQ8IZ69 625 aaKnown RBP21.96■■□□□ 1.11
RTN1-201ENST00000267484 ABCC2Q92887 1545 aa21.95■■□□□ 1.1
RTN1-201ENST00000267484 PIK3C2GO75747 1445 aa21.94■■□□□ 1.1
RTN1-201ENST00000267484 ANO8Q9HCE9 1232 aaPredicted RBP21.94■■□□□ 1.1
RTN1-201ENST00000267484 BRPF3Q9ULD4 1205 aa21.94■■□□□ 1.1
RTN1-201ENST00000267484 SYNMO15061 1565 aa21.94■■□□□ 1.1
RTN1-201ENST00000267484 PANK1Q8TE04 598 aa21.93■■□□□ 1.1
RTN1-201ENST00000267484 RRP7AQ9Y3A4 280 aaKnown RBP21.93■■□□□ 1.1
RTN1-201ENST00000267484 ADGRF5Q8IZF2 1346 aa21.93■■□□□ 1.1
RTN1-201ENST00000267484 CLTCL1P53675 1640 aa21.93■■□□□ 1.1
RTN1-201ENST00000267484 KIF3BO15066 747 aa21.93■■□□□ 1.1
RTN1-201ENST00000267484 COG6Q9Y2V7 657 aa21.92■■□□□ 1.1
RTN1-201ENST00000267484 NKTRP30414 1462 aaKnown RBP21.92■■□□□ 1.1
RTN1-201ENST00000267484 GSE1Q14687 1217 aa21.91■■□□□ 1.1
RTN1-201ENST00000267484 MYOM1P52179 1685 aa21.91■■□□□ 1.1
RTN1-201ENST00000267484 FRAT1Q92837 279 aaPredicted RBP21.9■■□□□ 1.1
RTN1-201ENST00000267484 FRAT2O75474 233 aaPredicted RBP21.9■■□□□ 1.1
RTN1-201ENST00000267484 ABCC1P33527 1531 aa21.9■■□□□ 1.1
RTN1-201ENST00000267484 CANXP27824 592 aaKnown RBP21.9■■□□□ 1.1
RTN1-201ENST00000267484 UGGT1Q9NYU2 1555 aa21.9■■□□□ 1.1
RTN1-201ENST00000267484 E9PSI1 815 aa21.89■■□□□ 1.1
RTN1-201ENST00000267484 TRPM2O94759 1503 aa21.89■■□□□ 1.1
RTN1-201ENST00000267484 SPHKAPQ2M3C7 1700 aa21.88■■□□□ 1.09
RTN1-201ENST00000267484 SEC24BO95487 1268 aa21.88■■□□□ 1.09
RTN1-201ENST00000267484 SCAPERQ9BY12 1400 aa21.88■■□□□ 1.09
RTN1-201ENST00000267484 EIF3AQ14152 1382 aaKnown RBP21.87■■□□□ 1.09
RTN1-201ENST00000267484 TNNQ9UQP3 1299 aa21.86■■□□□ 1.09
RTN1-201ENST00000267484 PTPRTO14522 1441 aa21.86■■□□□ 1.09
RTN1-201ENST00000267484 CHGAP10645 457 aaKnown RBP21.86■■□□□ 1.09
RTN1-201ENST00000267484 BCL2L13Q9BXK5 485 aa21.86■■□□□ 1.09
RTN1-201ENST00000267484 ERVK-7P63135 1459 aa21.85■■□□□ 1.09
RTN1-201ENST00000267484 WWC1Q8IX03 1113 aa21.85■■□□□ 1.09
RTN1-201ENST00000267484 CLASP1Q7Z460 1538 aa21.85■■□□□ 1.09
RTN1-201ENST00000267484 CENPJQ9HC77 1338 aaPredicted RBP21.84■■□□□ 1.09
RTN1-201ENST00000267484 NPC1L1Q9UHC9 1359 aa21.84■■□□□ 1.09
RTN1-201ENST00000267484 CEP152O94986 1710 aa21.83■■□□□ 1.09
RTN1-201ENST00000267484 ZCCHC11Q5TAX3 1644 aaKnown RBP21.83■■□□□ 1.09
RTN1-201ENST00000267484 SHROOM2Q13796 1616 aa21.82■■□□□ 1.08
RTN1-201ENST00000267484 TRAK1Q9UPV9 953 aa21.82■■□□□ 1.08
RTN1-201ENST00000267484 KDM5AP29375 1690 aaKnown RBP21.82■■□□□ 1.08
RTN1-201ENST00000267484 CLUAP1Q96AJ1 413 aa21.81■■□□□ 1.08
RTN1-201ENST00000267484 ZFYVE16Q7Z3T8 1539 aa21.81■■□□□ 1.08
RTN1-201ENST00000267484 SLC12A5Q9H2X9 1139 aa21.81■■□□□ 1.08
RTN1-201ENST00000267484 USP19O94966 1318 aa21.81■■□□□ 1.08
RTN1-201ENST00000267484 KANK1Q14678 1352 aa21.8■■□□□ 1.08
RTN1-201ENST00000267484 MORC1Q86VD1 984 aa21.79■■□□□ 1.08
RTN1-201ENST00000267484 SENP3Q9H4L4 574 aaPredicted RBP21.79■■□□□ 1.08
RTN1-201ENST00000267484 RLBP1P12271 317 aa21.78■■□□□ 1.08
RTN1-201ENST00000267484 STAC3Q96MF2 364 aa21.77■■□□□ 1.08
RTN1-201ENST00000267484 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.77■■□□□ 1.08
RTN1-201ENST00000267484 CGNL1Q0VF96 1302 aa21.77■■□□□ 1.08
RTN1-201ENST00000267484 TMEM132EQ6IEE7 984 aa21.77■■□□□ 1.08
RTN1-201ENST00000267484 PDE3AQ14432 1141 aa21.76■■□□□ 1.07
RTN1-201ENST00000267484 TCP11L2Q8N4U5 519 aa21.76■■□□□ 1.07
RTN1-201ENST00000267484 SLKQ9H2G2 1235 aaPredicted RBP21.76■■□□□ 1.07
RTN1-201ENST00000267484 NSD3Q9BZ95 1437 aa21.75■■□□□ 1.07
RTN1-201ENST00000267484 ABCA6Q8N139 1617 aa21.75■■□□□ 1.07
RTN1-201ENST00000267484 PCDHB15Q9Y5E8 787 aa21.75■■□□□ 1.07
RTN1-201ENST00000267484 RTEL1-TNFRSF6BF6WH68 1400 aa21.74■■□□□ 1.07
RTN1-201ENST00000267484 RARSP54136 660 aaKnown RBP21.74■■□□□ 1.07
RTN1-201ENST00000267484 NUTM2DQ5VT03 806 aaPredicted RBP21.73■■□□□ 1.07
RTN1-201ENST00000267484 TET3O43151 1660 aa21.73■■□□□ 1.07
RTN1-201ENST00000267484 MTHFSP49914 203 aa21.71■■□□□ 1.07
RTN1-201ENST00000267484 MAP3K4Q9Y6R4 1608 aa21.71■■□□□ 1.07
RTN1-201ENST00000267484 POLR3AO14802 1390 aaPredicted RBP21.71■■□□□ 1.07
RTN1-201ENST00000267484 NOS1P29475 1434 aa21.71■■□□□ 1.07
RTN1-201ENST00000267484 ATP7AQ04656 1500 aa21.71■■□□□ 1.07
RTN1-201ENST00000267484 RUNDC1Q96C34 613 aa21.7■■□□□ 1.06
RTN1-201ENST00000267484 FANCAO15360 1455 aa21.69■■□□□ 1.06
RTN1-201ENST00000267484 DEPDC5O75140 1603 aa21.69■■□□□ 1.06
RTN1-201ENST00000267484 MAPK8IP3Q9UPT6 1336 aa21.67■■□□□ 1.06
RTN1-201ENST00000267484 CFAP65Q6ZU64 1925 aaKnown RBP21.67■■□□□ 1.06
RTN1-201ENST00000267484 POGKQ9P215 609 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms