RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 EFCAB5A4FU69 1503 aa13.05□□□□□ -0.32
CPT1A-201ENST00000265641 U2AF1L5P0DN76 240 aaPredicted RBP13.05□□□□□ -0.32
CPT1A-201ENST00000265641 U2AF1Q01081 240 aaKnown RBP eCLIP13.05□□□□□ -0.32
CPT1A-201ENST00000265641 MCM4P33991 863 aa13.05□□□□□ -0.32
CPT1A-201ENST00000265641 CCDC146Q8IYE0 955 aa13.05□□□□□ -0.32
CPT1A-201ENST00000265641 DNAJC2Q99543 621 aaKnown RBP13.05□□□□□ -0.32
CPT1A-201ENST00000265641 BECN2A8MW95 431 aa13.05□□□□□ -0.32
CPT1A-201ENST00000265641 SMAP1Q8IYB5 467 aaPredicted RBP13.05□□□□□ -0.32
CPT1A-201ENST00000265641 NUP155O75694 1391 aa13.04□□□□□ -0.32
CPT1A-201ENST00000265641 USP47Q96K76 1375 aa13.04□□□□□ -0.32
CPT1A-201ENST00000265641 WASHC2AQ641Q2 1341 aa13.04□□□□□ -0.32
CPT1A-201ENST00000265641 REC8O95072 547 aa13.04□□□□□ -0.32
CPT1A-201ENST00000265641 DNMBPQ6XZF7 1577 aa13.04□□□□□ -0.32
CPT1A-201ENST00000265641 BRD4O60885 1362 aaPredicted RBP13.04□□□□□ -0.32
CPT1A-201ENST00000265641 OS9Q13438 667 aaPredicted RBP13.04□□□□□ -0.32
CPT1A-201ENST00000265641 TSPY26PQ9H489 355 aa13.04□□□□□ -0.32
CPT1A-201ENST00000265641 ZNF592Q92610 1267 aa13.03□□□□□ -0.32
CPT1A-201ENST00000265641 IFT57Q9NWB7 429 aa13.03□□□□□ -0.32
CPT1A-201ENST00000265641 KIF7Q2M1P5 1343 aa13.03□□□□□ -0.32
CPT1A-201ENST00000265641 COG6Q9Y2V7 657 aa13.03□□□□□ -0.32
CPT1A-201ENST00000265641 GNL2Q13823 731 aaKnown RBP13.03□□□□□ -0.32
CPT1A-201ENST00000265641 BBXQ8WY36 941 aaPredicted RBP13.02□□□□□ -0.33
CPT1A-201ENST00000265641 FAM184AQ8NB25 1140 aa13.02□□□□□ -0.33
CPT1A-201ENST00000265641 APBB1O00213 710 aa13.02□□□□□ -0.33
CPT1A-201ENST00000265641 CDR1P51861 262 aa13.02□□□□□ -0.33
CPT1A-201ENST00000265641 WASHC2CQ9Y4E1 1318 aa13.02□□□□□ -0.33
CPT1A-201ENST00000265641 TAF7LQ5H9L4 462 aa13.01□□□□□ -0.33
CPT1A-201ENST00000265641 CWC22Q9HCG8 908 aaKnown RBP13.01□□□□□ -0.33
CPT1A-201ENST00000265641 CHMP4AQ9BY43 222 aa13□□□□□ -0.33
CPT1A-201ENST00000265641 MCTP1Q6DN14 999 aa13□□□□□ -0.33
CPT1A-201ENST00000265641 CARMIL2Q6F5E8 1435 aa13□□□□□ -0.33
CPT1A-201ENST00000265641 TPM1P09493 284 aa13□□□□□ -0.33
CPT1A-201ENST00000265641 ZKSCAN2Q63HK3 967 aa13□□□□□ -0.33
CPT1A-201ENST00000265641 PANK3Q9H999 370 aa13□□□□□ -0.33
CPT1A-201ENST00000265641 GAPVD1Q14C86 1478 aa13□□□□□ -0.33
CPT1A-201ENST00000265641 UACAQ9BZF9 1416 aa13□□□□□ -0.33
CPT1A-201ENST00000265641 PRIMPOLQ96LW4 560 aa12.99□□□□□ -0.33
CPT1A-201ENST00000265641 DDX19BQ9UMR2 479 aa12.99□□□□□ -0.33
CPT1A-201ENST00000265641 TDRD9Q8NDG6 1382 aaKnown RBP12.99□□□□□ -0.33
CPT1A-201ENST00000265641 NPM1P06748 294 aaKnown RBP eCLIP12.99□□□□□ -0.33
CPT1A-201ENST00000265641 CCDC112Q8NEF3 446 aa12.99□□□□□ -0.33
CPT1A-201ENST00000265641 AKNAQ7Z591 1439 aa12.99□□□□□ -0.33
CPT1A-201ENST00000265641 HOMER1Q86YM7 354 aa12.99□□□□□ -0.33
CPT1A-201ENST00000265641 CGNQ9P2M7 1197 aaKnown RBP12.99□□□□□ -0.33
CPT1A-201ENST00000265641 LAMC3Q9Y6N6 1575 aa12.99□□□□□ -0.33
CPT1A-201ENST00000265641 MCM2P49736 904 aa12.98□□□□□ -0.33
CPT1A-201ENST00000265641 POGKQ9P215 609 aa12.98□□□□□ -0.33
CPT1A-201ENST00000265641 ARAP1Q96P48 1450 aa12.98□□□□□ -0.33
CPT1A-201ENST00000265641 FAM107BQ9H098 131 aa12.98□□□□□ -0.33
CPT1A-201ENST00000265641 FHOD3Q2V2M9 1422 aa12.98□□□□□ -0.33
CPT1A-201ENST00000265641 KIF2AO00139 706 aaPredicted RBP12.97□□□□□ -0.33
CPT1A-201ENST00000265641 IRX3P78415 501 aaPredicted RBP12.97□□□□□ -0.33
CPT1A-201ENST00000265641 TPD52L1Q16890 204 aaPredicted RBP12.97□□□□□ -0.33
CPT1A-201ENST00000265641 CTR9Q6PD62 1173 aa12.97□□□□□ -0.33
CPT1A-201ENST00000265641 HDAC5Q9UQL6 1122 aa12.97□□□□□ -0.33
CPT1A-201ENST00000265641 FYCO1Q9BQS8 1478 aa12.97□□□□□ -0.33
CPT1A-201ENST00000265641 RRBP1Q9P2E9 1410 aaKnown RBP12.97□□□□□ -0.33
CPT1A-201ENST00000265641 NBPF1Q3BBV0 1214 aa12.97□□□□□ -0.33
CPT1A-201ENST00000265641 H0YHG0 523 aa12.97□□□□□ -0.33
CPT1A-201ENST00000265641 TERF1P54274 439 aa12.97□□□□□ -0.33
CPT1A-201ENST00000265641 TIGD1Q96MW7 591 aa12.97□□□□□ -0.33
CPT1A-201ENST00000265641 NAP1L2Q9ULW6 460 aaPredicted RBP12.97□□□□□ -0.33
CPT1A-201ENST00000265641 DCTN1Q14203 1278 aa12.96□□□□□ -0.33
CPT1A-201ENST00000265641 CASKIN1Q8WXD9 1431 aa12.96□□□□□ -0.33
CPT1A-201ENST00000265641 CCDC191Q8NCU4 936 aa12.96□□□□□ -0.33
CPT1A-201ENST00000265641 MAP3K1Q13233 1512 aa12.96□□□□□ -0.33
CPT1A-201ENST00000265641 KIF20AO95235 890 aa12.96□□□□□ -0.33
CPT1A-201ENST00000265641 GPATCH3Q96I76 525 aa12.96□□□□□ -0.33
CPT1A-201ENST00000265641 TOPBP1Q92547 1522 aa12.96□□□□□ -0.33
CPT1A-201ENST00000265641 CUL7Q14999 1698 aa12.96□□□□□ -0.34
CPT1A-201ENST00000265641 PDIA4P13667 645 aaKnown RBP12.96□□□□□ -0.34
CPT1A-201ENST00000265641 EIF3JO75822 258 aaKnown RBP12.96□□□□□ -0.34
CPT1A-201ENST00000265641 FOXD4L5Q5VV16 416 aaPredicted RBP12.95□□□□□ -0.34
CPT1A-201ENST00000265641 FOXD4L4Q8WXT5 416 aaPredicted RBP12.95□□□□□ -0.34
CPT1A-201ENST00000265641 ABCA10Q8WWZ4 1543 aa12.95□□□□□ -0.34
CPT1A-201ENST00000265641 APAF1O14727 1248 aa12.95□□□□□ -0.34
CPT1A-201ENST00000265641 HS1BP3Q53T59 392 aa12.94□□□□□ -0.34
CPT1A-201ENST00000265641 RABEP1Q15276 862 aa12.94□□□□□ -0.34
CPT1A-201ENST00000265641 ANKRD45Q5TZF3 282 aa12.94□□□□□ -0.34
CPT1A-201ENST00000265641 INTS3Q68E01 1043 aaKnown RBP12.94□□□□□ -0.34
CPT1A-201ENST00000265641 BCL2L13Q9BXK5 485 aa12.94□□□□□ -0.34
CPT1A-201ENST00000265641 TSR1Q2NL82 804 aaKnown RBP12.94□□□□□ -0.34
CPT1A-201ENST00000265641 CCAR2Q8N163 923 aaKnown RBP12.94□□□□□ -0.34
CPT1A-201ENST00000265641 RUFY1Q96T51 708 aa12.94□□□□□ -0.34
CPT1A-201ENST00000265641 NAT10Q9H0A0 1025 aaKnown RBP12.94□□□□□ -0.34
CPT1A-201ENST00000265641 LRRC9Q6ZRR7 1453 aa12.93□□□□□ -0.34
CPT1A-201ENST00000265641 PDE3AQ14432 1141 aa12.92□□□□□ -0.34
CPT1A-201ENST00000265641 NOL8Q76FK4 1167 aaKnown RBP12.92□□□□□ -0.34
CPT1A-201ENST00000265641 RAD54L2Q9Y4B4 1467 aa12.92□□□□□ -0.34
CPT1A-201ENST00000265641 SRPK2P78362 688 aaKnown RBP12.92□□□□□ -0.34
CPT1A-201ENST00000265641 KANK1Q14678 1352 aa12.92□□□□□ -0.34
CPT1A-201ENST00000265641 TRIM6-TRIM34B2RNG4 842 aa12.92□□□□□ -0.34
CPT1A-201ENST00000265641 ERLIN1O75477 346 aa12.91□□□□□ -0.34
CPT1A-201ENST00000265641 CCDC94Q9BW85 323 aaPredicted RBP12.91□□□□□ -0.34
CPT1A-201ENST00000265641 ROCK1Q13464 1354 aa12.91□□□□□ -0.34
CPT1A-201ENST00000265641 CDC45O75419 566 aa12.91□□□□□ -0.34
CPT1A-201ENST00000265641 LMOD3Q0VAK6 560 aa12.9□□□□□ -0.34
CPT1A-201ENST00000265641 DZIP1LQ8IYY4 767 aaKnown RBP12.9□□□□□ -0.34
CPT1A-201ENST00000265641 GIMAP7Q8NHV1 300 aa12.9□□□□□ -0.34
CPT1A-201ENST00000265641 POLA1P09884 1462 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms