RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 HDAC5Q9UQL6 1122 aa20.97■□□□□ 0.95
PHRF1-201ENST00000264555 KIAA1211Q6ZU35 1233 aa20.97■□□□□ 0.95
PHRF1-201ENST00000264555 SCAPERQ9BY12 1400 aa20.97■□□□□ 0.95
PHRF1-201ENST00000264555 FANCIQ9NVI1 1328 aa20.97■□□□□ 0.95
PHRF1-201ENST00000264555 SLC4A10Q6U841 1118 aa20.97■□□□□ 0.95
PHRF1-201ENST00000264555 ARHGEF11O15085 1522 aa20.96■□□□□ 0.95
PHRF1-201ENST00000264555 PPP2R1AP30153 589 aa20.96■□□□□ 0.95
PHRF1-201ENST00000264555 CCDC141Q6ZP82 1450 aa20.96■□□□□ 0.95
PHRF1-201ENST00000264555 GBP4Q96PP9 640 aa20.96■□□□□ 0.95
PHRF1-201ENST00000264555 AKNAQ7Z591 1439 aa20.96■□□□□ 0.95
PHRF1-201ENST00000264555 PTMSP20962 102 aa20.95■□□□□ 0.94
PHRF1-201ENST00000264555 RIPK4P57078 832 aa20.95■□□□□ 0.94
PHRF1-201ENST00000264555 ELL2O00472 640 aaPredicted RBP20.94■□□□□ 0.94
PHRF1-201ENST00000264555 LTV1Q96GA3 475 aaPredicted RBP20.94■□□□□ 0.94
PHRF1-201ENST00000264555 PNISRQ8TF01 805 aaKnown RBP20.93■□□□□ 0.94
PHRF1-201ENST00000264555 CABP2Q9NPB3 220 aa20.93■□□□□ 0.94
PHRF1-201ENST00000264555 DDX19BQ9UMR2 479 aa20.92■□□□□ 0.94
PHRF1-201ENST00000264555 ERBINQ96RT1 1412 aa20.91■□□□□ 0.94
PHRF1-201ENST00000264555 DZIP1LQ8IYY4 767 aaKnown RBP20.91■□□□□ 0.94
PHRF1-201ENST00000264555 GGNBP2Q9H3C7 697 aa20.9■□□□□ 0.94
PHRF1-201ENST00000264555 KIF14Q15058 1648 aa20.89■□□□□ 0.94
PHRF1-201ENST00000264555 NCOA1Q15788 1441 aa20.89■□□□□ 0.93
PHRF1-201ENST00000264555 MTHFSP49914 203 aa20.88■□□□□ 0.93
PHRF1-201ENST00000264555 AAMPQ13685 434 aa20.88■□□□□ 0.93
PHRF1-201ENST00000264555 NAP1L2Q9ULW6 460 aaPredicted RBP20.88■□□□□ 0.93
PHRF1-201ENST00000264555 GOLGA6L4A6NEF3 574 aa20.88■□□□□ 0.93
PHRF1-201ENST00000264555 ZNF608Q9ULD9 1512 aaPredicted RBP20.88■□□□□ 0.93
PHRF1-201ENST00000264555 CDCA7LQ96GN5 454 aa20.87■□□□□ 0.93
PHRF1-201ENST00000264555 THOC2Q8NI27 1593 aaKnown RBP20.87■□□□□ 0.93
PHRF1-201ENST00000264555 GPATCH3Q96I76 525 aa20.86■□□□□ 0.93
PHRF1-201ENST00000264555 RTN4Q9NQC3 1192 aaKnown RBP20.86■□□□□ 0.93
PHRF1-201ENST00000264555 TRIM6-TRIM34B2RNG4 842 aa20.86■□□□□ 0.93
PHRF1-201ENST00000264555 ANKRD45Q5TZF3 282 aa20.86■□□□□ 0.93
PHRF1-201ENST00000264555 CCDC184Q52MB2 194 aa20.85■□□□□ 0.93
PHRF1-201ENST00000264555 NPHP1O15259 732 aa20.85■□□□□ 0.93
PHRF1-201ENST00000264555 PLCB2Q00722 1185 aa20.85■□□□□ 0.93
PHRF1-201ENST00000264555 USP35Q9P2H5 1018 aa20.85■□□□□ 0.93
PHRF1-201ENST00000264555 DNTTIP2Q5QJE6 756 aaKnown RBP20.84■□□□□ 0.93
PHRF1-201ENST00000264555 API5Q9BZZ5 524 aaKnown RBP20.84■□□□□ 0.93
PHRF1-201ENST00000264555 SLC52A1Q9NWF4 448 aa20.84■□□□□ 0.93
PHRF1-201ENST00000264555 KIF16BQ96L93 1317 aa20.84■□□□□ 0.93
PHRF1-201ENST00000264555 RPGRIP1LQ68CZ1 1315 aa20.83■□□□□ 0.93
PHRF1-201ENST00000264555 GNAI1P63096 354 aa20.83■□□□□ 0.93
PHRF1-201ENST00000264555 TCP11L2Q8N4U5 519 aa20.83■□□□□ 0.93
PHRF1-201ENST00000264555 RPRD2Q5VT52 1461 aaKnown RBP20.82■□□□□ 0.92
PHRF1-201ENST00000264555 SMG6Q86US8 1419 aaKnown RBP20.82■□□□□ 0.92
PHRF1-201ENST00000264555 SLC12A5Q9H2X9 1139 aa20.8■□□□□ 0.92
PHRF1-201ENST00000264555 C11orf95C9JLR9 678 aaPredicted RBP20.8■□□□□ 0.92
PHRF1-201ENST00000264555 PRAM1Q96QH2 718 aa20.79■□□□□ 0.92
PHRF1-201ENST00000264555 GZF1Q9H116 711 aaPredicted RBP20.79■□□□□ 0.92
PHRF1-201ENST00000264555 HMOX1P09601 288 aa20.78■□□□□ 0.92
PHRF1-201ENST00000264555 C1orf141Q5JVX7 400 aa20.78■□□□□ 0.92
PHRF1-201ENST00000264555 ST18O60284 1047 aa20.77■□□□□ 0.92
PHRF1-201ENST00000264555 NAP1L5Q96NT1 182 aaPredicted RBP20.77■□□□□ 0.92
PHRF1-201ENST00000264555 PANK1Q8TE04 598 aa20.77■□□□□ 0.92
PHRF1-201ENST00000264555 ZNF330Q9Y3S2 320 aaPredicted RBP20.77■□□□□ 0.92
PHRF1-201ENST00000264555 UGGT2Q9NYU1 1516 aa20.77■□□□□ 0.92
PHRF1-201ENST00000264555 TEFQ10587 303 aa20.76■□□□□ 0.91
PHRF1-201ENST00000264555 TAOK2Q9UL54 1235 aa20.76■□□□□ 0.91
PHRF1-201ENST00000264555 RAPGEF3O95398 923 aa20.76■□□□□ 0.91
PHRF1-201ENST00000264555 SLC4A3P48751 1232 aa20.75■□□□□ 0.91
PHRF1-201ENST00000264555 PTPRKQ15262 1439 aa20.75■□□□□ 0.91
PHRF1-201ENST00000264555 GPATCH8Q9UKJ3 1502 aaKnown RBP20.74■□□□□ 0.91
PHRF1-201ENST00000264555 GOLGA6L6A8MZA4 724 aa20.74■□□□□ 0.91
PHRF1-201ENST00000264555 MAPKBP1O60336 1514 aa20.74■□□□□ 0.91
PHRF1-201ENST00000264555 CHMP3Q9Y3E7 222 aa20.73■□□□□ 0.91
PHRF1-201ENST00000264555 GOLGA6L3A6NEY3 463 aa20.72■□□□□ 0.91
PHRF1-201ENST00000264555 PSME1Q06323 249 aa20.72■□□□□ 0.91
PHRF1-201ENST00000264555 PDE3AQ14432 1141 aa20.72■□□□□ 0.91
PHRF1-201ENST00000264555 MSNP26038 577 aaKnown RBP20.71■□□□□ 0.91
PHRF1-201ENST00000264555 SYAP1Q96A49 352 aaPredicted RBP20.71■□□□□ 0.91
PHRF1-201ENST00000264555 GORABQ5T7V8 394 aa20.7■□□□□ 0.91
PHRF1-201ENST00000264555 FOXD4L1Q9NU39 408 aa20.7■□□□□ 0.9
PHRF1-201ENST00000264555 CDK19Q9BWU1 502 aa20.7■□□□□ 0.9
PHRF1-201ENST00000264555 RAPGEF6Q8TEU7 1601 aa20.7■□□□□ 0.9
PHRF1-201ENST00000264555 CTTNBP2Q8WZ74 1663 aa20.69■□□□□ 0.9
PHRF1-201ENST00000264555 DDX11L8A8MPP1 907 aa20.68■□□□□ 0.9
PHRF1-201ENST00000264555 CDK11BP21127 795 aaKnown RBP20.68■□□□□ 0.9
PHRF1-201ENST00000264555 TSPYL4Q9UJ04 414 aa20.68■□□□□ 0.9
PHRF1-201ENST00000264555 RILPL2Q969X0 211 aa20.68■□□□□ 0.9
PHRF1-201ENST00000264555 TAF7LQ5H9L4 462 aa20.67■□□□□ 0.9
PHRF1-201ENST00000264555 WDR63Q8IWG1 891 aa20.67■□□□□ 0.9
PHRF1-201ENST00000264555 NRDCO43847 1150 aa20.67■□□□□ 0.9
PHRF1-201ENST00000264555 PRKAR2BP31323 418 aa20.67■□□□□ 0.9
PHRF1-201ENST00000264555 CABP1Q9NZU7 370 aa20.67■□□□□ 0.9
PHRF1-201ENST00000264555 ADGRL1O94910 1474 aa20.67■□□□□ 0.9
PHRF1-201ENST00000264555 HTATSF1O43719 755 aaKnown RBP20.67■□□□□ 0.9
PHRF1-201ENST00000264555 EIF2S2P20042 333 aaKnown RBP20.66■□□□□ 0.9
PHRF1-201ENST00000264555 TXNDC2Q86VQ3 553 aa20.66■□□□□ 0.9
PHRF1-201ENST00000264555 NUP153P49790 1475 aaKnown RBP20.66■□□□□ 0.9
PHRF1-201ENST00000264555 CD109Q6YHK3 1445 aa20.65■□□□□ 0.9
PHRF1-201ENST00000264555 ATAD2Q6PL18 1390 aa20.65■□□□□ 0.9
PHRF1-201ENST00000264555 EXOSC9Q06265 439 aaKnown RBP20.65■□□□□ 0.9
PHRF1-201ENST00000264555 FKBP5Q13451 457 aaPredicted RBP20.65■□□□□ 0.9
PHRF1-201ENST00000264555 REC8O95072 547 aa20.65■□□□□ 0.9
PHRF1-201ENST00000264555 ZNF692Q9BU19 519 aaPredicted RBP20.64■□□□□ 0.89
PHRF1-201ENST00000264555 CT47B1P0C2W7 299 aaPredicted RBP20.63■□□□□ 0.89
PHRF1-201ENST00000264555 NOL8Q76FK4 1167 aaKnown RBP20.63■□□□□ 0.89
PHRF1-201ENST00000264555 NINLQ9Y2I6 1382 aa20.63■□□□□ 0.89
PHRF1-201ENST00000264555 NLRP6P59044 892 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms