RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 CHMP5Q9NZZ3 219 aa16.8■□□□□ 0.28
TCF3-201ENST00000262965 CHMP3Q9Y3E7 222 aa16.8■□□□□ 0.28
TCF3-201ENST00000262965 PRG4Q92954 1404 aaPredicted RBP16.79■□□□□ 0.28
TCF3-201ENST00000262965 HDGFP51858 240 aaKnown RBP16.79■□□□□ 0.28
TCF3-201ENST00000262965 NBPF8Q3BBV2 869 aa16.79■□□□□ 0.28
TCF3-201ENST00000262965 PRDM2Q13029 1718 aa16.79■□□□□ 0.28
TCF3-201ENST00000262965 NCOA2Q15596 1464 aa16.78■□□□□ 0.28
TCF3-201ENST00000262965 BIVM-ERCC5R4GMW8 1640 aa16.78■□□□□ 0.28
TCF3-201ENST00000262965 MINK1Q8N4C8 1332 aaPredicted RBP16.78■□□□□ 0.28
TCF3-201ENST00000262965 HSP90B1P14625 803 aaKnown RBP16.78■□□□□ 0.28
TCF3-201ENST00000262965 CCDC9Q9Y3X0 531 aaKnown RBP16.76■□□□□ 0.27
TCF3-201ENST00000262965 C22orf23Q9BZE7 217 aa16.76■□□□□ 0.27
TCF3-201ENST00000262965 FAM13BQ9NYF5 915 aa16.76■□□□□ 0.27
TCF3-201ENST00000262965 DDX19BQ9UMR2 479 aa16.76■□□□□ 0.27
TCF3-201ENST00000262965 MSH5O43196 834 aa16.75■□□□□ 0.27
TCF3-201ENST00000262965 RIPK4P57078 832 aa16.75■□□□□ 0.27
TCF3-201ENST00000262965 AMPHP49418 695 aa16.75■□□□□ 0.27
TCF3-201ENST00000262965 KIAA0586Q9BVV6 1533 aa16.75■□□□□ 0.27
TCF3-201ENST00000262965 LMOD3Q0VAK6 560 aa16.74■□□□□ 0.27
TCF3-201ENST00000262965 NECTIN2Q92692 538 aa16.74■□□□□ 0.27
TCF3-201ENST00000262965 KIF16BQ96L93 1317 aa16.74■□□□□ 0.27
TCF3-201ENST00000262965 NGDNQ8NEJ9 315 aaKnown RBP16.74■□□□□ 0.27
TCF3-201ENST00000262965 SKAP1Q86WV1 359 aa16.73■□□□□ 0.27
TCF3-201ENST00000262965 HTATSF1O43719 755 aaKnown RBP16.73■□□□□ 0.27
TCF3-201ENST00000262965 SKOR2Q2VWA4 1001 aaPredicted RBP16.73■□□□□ 0.27
TCF3-201ENST00000262965 NBPF1Q3BBV0 1214 aa16.73■□□□□ 0.27
TCF3-201ENST00000262965 CSB-PGBD3P0DP91 1061 aa16.72■□□□□ 0.27
TCF3-201ENST00000262965 GORABQ5T7V8 394 aa16.72■□□□□ 0.27
TCF3-201ENST00000262965 RRBP1Q9P2E9 1410 aaKnown RBP16.72■□□□□ 0.27
TCF3-201ENST00000262965 SYNJ2O15056 1496 aa16.72■□□□□ 0.27
TCF3-201ENST00000262965 CUL7Q14999 1698 aa16.72■□□□□ 0.27
TCF3-201ENST00000262965 PNISRQ8TF01 805 aaKnown RBP16.71■□□□□ 0.27
TCF3-201ENST00000262965 ISY1Q9ULR0 285 aaKnown RBP16.71■□□□□ 0.27
TCF3-201ENST00000262965 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.71■□□□□ 0.27
TCF3-201ENST00000262965 BACH2Q9BYV9 841 aa16.71■□□□□ 0.27
TCF3-201ENST00000262965 PHF14O94880 888 aa16.71■□□□□ 0.27
TCF3-201ENST00000262965 BCAR3O75815 825 aa16.7■□□□□ 0.26
TCF3-201ENST00000262965 RUNDC1Q96C34 613 aa16.7■□□□□ 0.26
TCF3-201ENST00000262965 GPATCH3Q96I76 525 aa16.7■□□□□ 0.26
TCF3-201ENST00000262965 GGNBP2Q9H3C7 697 aa16.7■□□□□ 0.26
TCF3-201ENST00000262965 ANO2Q9NQ90 1003 aa16.69■□□□□ 0.26
TCF3-201ENST00000262965 HMOX1P09601 288 aa16.69■□□□□ 0.26
TCF3-201ENST00000262965 BRD4O60885 1362 aaPredicted RBP16.69■□□□□ 0.26
TCF3-201ENST00000262965 CREBRFQ8IUR6 639 aa16.69■□□□□ 0.26
TCF3-201ENST00000262965 EVC2Q86UK5 1308 aa16.69■□□□□ 0.26
TCF3-201ENST00000262965 DIAPH1O60610 1272 aaKnown RBP16.68■□□□□ 0.26
TCF3-201ENST00000262965 MCTP1Q6DN14 999 aa16.68■□□□□ 0.26
TCF3-201ENST00000262965 FAM43AQ8N2R8 423 aa16.68■□□□□ 0.26
TCF3-201ENST00000262965 TCP11L2Q8N4U5 519 aa16.68■□□□□ 0.26
TCF3-201ENST00000262965 TIAM1Q13009 1591 aa16.68■□□□□ 0.26
TCF3-201ENST00000262965 SF3A1Q15459 793 aaKnown RBP16.67■□□□□ 0.26
TCF3-201ENST00000262965 RNF214Q8ND24 703 aa16.67■□□□□ 0.26
TCF3-201ENST00000262965 CSPP1Q1MSJ5 1256 aa16.67■□□□□ 0.26
TCF3-201ENST00000262965 MTHFSP49914 203 aa16.66■□□□□ 0.26
TCF3-201ENST00000262965 TMEM132EQ6IEE7 984 aa16.66■□□□□ 0.26
TCF3-201ENST00000262965 IQGAP2Q13576 1575 aa16.66■□□□□ 0.26
TCF3-201ENST00000262965 REC8O95072 547 aa16.66■□□□□ 0.26
TCF3-201ENST00000262965 TRAK2O60296 914 aa16.66■□□□□ 0.26
TCF3-201ENST00000262965 EIF2S2P20042 333 aaKnown RBP16.65■□□□□ 0.26
TCF3-201ENST00000262965 COG3Q96JB2 828 aa16.65■□□□□ 0.26
TCF3-201ENST00000262965 PDZRN3Q9UPQ7 1066 aa16.65■□□□□ 0.26
TCF3-201ENST00000262965 WDR97A6NE52 1622 aa16.65■□□□□ 0.26
TCF3-201ENST00000262965 EHBP1L1Q8N3D4 1523 aa16.65■□□□□ 0.26
TCF3-201ENST00000262965 BCL11BQ9C0K0 894 aaPredicted RBP16.65■□□□□ 0.26
TCF3-201ENST00000262965 MAGI1Q96QZ7 1491 aaPredicted RBP16.65■□□□□ 0.26
TCF3-201ENST00000262965 ZNF608Q9ULD9 1512 aaPredicted RBP16.65■□□□□ 0.26
TCF3-201ENST00000262965 PPP2R1AP30153 589 aa16.64■□□□□ 0.26
TCF3-201ENST00000262965 ZNF592Q92610 1267 aa16.64■□□□□ 0.26
TCF3-201ENST00000262965 TROQ12816 1431 aaPredicted RBP16.64■□□□□ 0.25
TCF3-201ENST00000262965 ANKRD50Q9ULJ7 1429 aa16.64■□□□□ 0.25
TCF3-201ENST00000262965 VGFO15240 615 aaPredicted RBP16.64■□□□□ 0.25
TCF3-201ENST00000262965 TAF7LQ5H9L4 462 aa16.64■□□□□ 0.25
TCF3-201ENST00000262965 GRIN2AQ12879 1464 aa16.63■□□□□ 0.25
TCF3-201ENST00000262965 TOMM22Q9NS69 142 aa16.63■□□□□ 0.25
TCF3-201ENST00000262965 TNNT3P45378 269 aaPredicted RBP16.63■□□□□ 0.25
TCF3-201ENST00000262965 BECN2A8MW95 431 aa16.63■□□□□ 0.25
TCF3-201ENST00000262965 H3BQV1 296 aa16.63■□□□□ 0.25
TCF3-201ENST00000262965 IFFO2Q5TF58 517 aa16.63■□□□□ 0.25
TCF3-201ENST00000262965 HECW1Q76N89 1606 aa16.63■□□□□ 0.25
TCF3-201ENST00000262965 CFAP70Q5T0N1 1121 aa16.62■□□□□ 0.25
TCF3-201ENST00000262965 DIAPH3Q9NSV4 1193 aa16.62■□□□□ 0.25
TCF3-201ENST00000262965 VPS37CA5D8V6 355 aaPredicted RBP16.62■□□□□ 0.25
TCF3-201ENST00000262965 C11orf95C9JLR9 678 aaPredicted RBP16.62■□□□□ 0.25
TCF3-201ENST00000262965 TPM4P67936 248 aa16.62■□□□□ 0.25
TCF3-201ENST00000262965 NGEFQ8N5V2 710 aa16.62■□□□□ 0.25
TCF3-201ENST00000262965 API5Q9BZZ5 524 aaKnown RBP16.62■□□□□ 0.25
TCF3-201ENST00000262965 FKBP5Q13451 457 aaPredicted RBP16.61■□□□□ 0.25
TCF3-201ENST00000262965 FAM184AQ8NB25 1140 aa16.61■□□□□ 0.25
TCF3-201ENST00000262965 MIA2Q96PC5 1412 aa16.61■□□□□ 0.25
TCF3-201ENST00000262965 GOLGA6L19H0YKK7 550 aa16.61■□□□□ 0.25
TCF3-201ENST00000262965 MRE11P49959 708 aa16.61■□□□□ 0.25
TCF3-201ENST00000262965 TSR2Q969E8 191 aaKnown RBP16.6■□□□□ 0.25
TCF3-201ENST00000262965 C1orf115Q9H7X2 142 aa16.6■□□□□ 0.25
TCF3-201ENST00000262965 ATP6V1DQ9Y5K8 247 aa16.6■□□□□ 0.25
TCF3-201ENST00000262965 CABP2Q9NPB3 220 aa16.6■□□□□ 0.25
TCF3-201ENST00000262965 R3HCC1Q9Y3T6 440 aaKnown RBP16.6■□□□□ 0.25
TCF3-201ENST00000262965 NASPP49321 788 aaPredicted RBP16.6■□□□□ 0.25
TCF3-201ENST00000262965 CCAR2Q8N163 923 aaKnown RBP16.6■□□□□ 0.25
TCF3-201ENST00000262965 EXOSC9Q06265 439 aaKnown RBP16.59■□□□□ 0.25
TCF3-201ENST00000262965 HDAC5Q9UQL6 1122 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms