RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 BCAR3O75815 825 aa22.72■■□□□ 1.23
TRAM1-201ENST00000262213 EIF2AK4Q9P2K8 1649 aaKnown RBP22.72■■□□□ 1.23
TRAM1-201ENST00000262213 WDR7Q9Y4E6 1490 aa22.72■■□□□ 1.23
TRAM1-201ENST00000262213 APAF1O14727 1248 aa22.72■■□□□ 1.23
TRAM1-201ENST00000262213 FRAT1Q92837 279 aaPredicted RBP22.71■■□□□ 1.23
TRAM1-201ENST00000262213 UNC13BO14795 1591 aa22.71■■□□□ 1.23
TRAM1-201ENST00000262213 LAMC1P11047 1609 aa22.71■■□□□ 1.23
TRAM1-201ENST00000262213 SLFN5Q08AF3 891 aa22.7■■□□□ 1.22
TRAM1-201ENST00000262213 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.7■■□□□ 1.22
TRAM1-201ENST00000262213 ZNF521Q96K83 1311 aa22.69■■□□□ 1.22
TRAM1-201ENST00000262213 TTC37Q6PGP7 1564 aa22.68■■□□□ 1.22
TRAM1-201ENST00000262213 FRAT2O75474 233 aaPredicted RBP22.67■■□□□ 1.22
TRAM1-201ENST00000262213 IQGAP3Q86VI3 1631 aa22.66■■□□□ 1.22
TRAM1-201ENST00000262213 DMRT2Q9Y5R5 561 aa22.64■■□□□ 1.22
TRAM1-201ENST00000262213 CDCA8Q53HL2 280 aa22.62■■□□□ 1.21
TRAM1-201ENST00000262213 IGHDP01880 384 aa22.62■■□□□ 1.21
TRAM1-201ENST00000262213 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.62■■□□□ 1.21
TRAM1-201ENST00000262213 CANXP27824 592 aaKnown RBP22.61■■□□□ 1.21
TRAM1-201ENST00000262213 ASXL1Q8IXJ9 1541 aa22.6■■□□□ 1.21
TRAM1-201ENST00000262213 RNF17Q9BXT8 1623 aaKnown RBP22.59■■□□□ 1.21
TRAM1-201ENST00000262213 MAST1Q9Y2H9 1570 aa22.59■■□□□ 1.21
TRAM1-201ENST00000262213 NEUROD2Q15784 382 aa22.59■■□□□ 1.21
TRAM1-201ENST00000262213 ABCC2Q92887 1545 aa22.58■■□□□ 1.21
TRAM1-201ENST00000262213 DUOX2Q9NRD8 1548 aa22.58■■□□□ 1.21
TRAM1-201ENST00000262213 PANK1Q8TE04 598 aa22.58■■□□□ 1.2
TRAM1-201ENST00000262213 COG6Q9Y2V7 657 aa22.57■■□□□ 1.2
TRAM1-201ENST00000262213 NKTRP30414 1462 aaKnown RBP22.57■■□□□ 1.2
TRAM1-201ENST00000262213 TRMT2AQ8IZ69 625 aaKnown RBP22.56■■□□□ 1.2
TRAM1-201ENST00000262213 TNNT2P45379 298 aaPredicted RBP22.55■■□□□ 1.2
TRAM1-201ENST00000262213 ATP10AO60312 1499 aa22.55■■□□□ 1.2
TRAM1-201ENST00000262213 PLXNC1O60486 1568 aa22.55■■□□□ 1.2
TRAM1-201ENST00000262213 SCAF11Q99590 1463 aaKnown RBP22.55■■□□□ 1.2
TRAM1-201ENST00000262213 MADDQ8WXG6 1647 aa22.55■■□□□ 1.2
TRAM1-201ENST00000262213 PIK3C2GO75747 1445 aa22.55■■□□□ 1.2
TRAM1-201ENST00000262213 E9PSI1 815 aa22.55■■□□□ 1.2
TRAM1-201ENST00000262213 SEC24BO95487 1268 aa22.54■■□□□ 1.2
TRAM1-201ENST00000262213 IQGAP1P46940 1657 aa22.53■■□□□ 1.2
TRAM1-201ENST00000262213 SYNMO15061 1565 aa22.53■■□□□ 1.2
TRAM1-201ENST00000262213 RRP7AQ9Y3A4 280 aaKnown RBP22.53■■□□□ 1.2
TRAM1-201ENST00000262213 EIF3AQ14152 1382 aaKnown RBP22.53■■□□□ 1.2
TRAM1-201ENST00000262213 CFAP70Q5T0N1 1121 aa22.52■■□□□ 1.2
TRAM1-201ENST00000262213 AFAP1Q8N556 730 aa22.52■■□□□ 1.2
TRAM1-201ENST00000262213 PRKCSHP14314 528 aaPredicted RBP22.51■■□□□ 1.19
TRAM1-201ENST00000262213 EFCAB2Q5VUJ9 269 aa22.51■■□□□ 1.19
TRAM1-201ENST00000262213 SLKQ9H2G2 1235 aaPredicted RBP22.51■■□□□ 1.19
TRAM1-201ENST00000262213 CENPJQ9HC77 1338 aaPredicted RBP22.51■■□□□ 1.19
TRAM1-201ENST00000262213 UHRF1BP1LA0JNW5 1464 aa22.51■■□□□ 1.19
TRAM1-201ENST00000262213 CARD14Q9BXL6 1004 aa22.5■■□□□ 1.19
TRAM1-201ENST00000262213 TRAPPC8Q9Y2L5 1435 aa22.5■■□□□ 1.19
TRAM1-201ENST00000262213 CLUAP1Q96AJ1 413 aa22.49■■□□□ 1.19
TRAM1-201ENST00000262213 SPAG9O60271 1321 aaKnown RBP22.48■■□□□ 1.19
TRAM1-201ENST00000262213 BCL2L13Q9BXK5 485 aa22.48■■□□□ 1.19
TRAM1-201ENST00000262213 USP19O94966 1318 aa22.47■■□□□ 1.19
TRAM1-201ENST00000262213 MYOM1P52179 1685 aa22.47■■□□□ 1.19
TRAM1-201ENST00000262213 CGNL1Q0VF96 1302 aa22.46■■□□□ 1.19
TRAM1-201ENST00000262213 WWC1Q8IX03 1113 aa22.46■■□□□ 1.19
TRAM1-201ENST00000262213 TNNQ9UQP3 1299 aa22.46■■□□□ 1.19
TRAM1-201ENST00000262213 ZCCHC11Q5TAX3 1644 aaKnown RBP22.44■■□□□ 1.18
TRAM1-201ENST00000262213 OSCARQ8IYS5 282 aa22.43■■□□□ 1.18
TRAM1-201ENST00000262213 POGKQ9P215 609 aa22.43■■□□□ 1.18
TRAM1-201ENST00000262213 CLTCL1P53675 1640 aa22.43■■□□□ 1.18
TRAM1-201ENST00000262213 SPHKAPQ2M3C7 1700 aa22.43■■□□□ 1.18
TRAM1-201ENST00000262213 PDE3AQ14432 1141 aa22.43■■□□□ 1.18
TRAM1-201ENST00000262213 ADGRF5Q8IZF2 1346 aa22.42■■□□□ 1.18
TRAM1-201ENST00000262213 KDM5AP29375 1690 aaKnown RBP22.42■■□□□ 1.18
TRAM1-201ENST00000262213 SCAPERQ9BY12 1400 aa22.42■■□□□ 1.18
TRAM1-201ENST00000262213 NPC1L1Q9UHC9 1359 aa22.41■■□□□ 1.18
TRAM1-201ENST00000262213 PLCH2O75038 1416 aa22.41■■□□□ 1.18
TRAM1-201ENST00000262213 ARXQ96QS3 562 aa22.41■■□□□ 1.18
TRAM1-201ENST00000262213 KIF3BO15066 747 aa22.4■■□□□ 1.18
TRAM1-201ENST00000262213 TRPM2O94759 1503 aa22.4■■□□□ 1.18
TRAM1-201ENST00000262213 EIF5BO60841 1220 aaKnown RBP22.4■■□□□ 1.18
TRAM1-201ENST00000262213 MAPK8IP3Q9UPT6 1336 aa22.4■■□□□ 1.18
TRAM1-201ENST00000262213 BECN1Q14457 450 aa22.39■■□□□ 1.18
TRAM1-201ENST00000262213 MORC1Q86VD1 984 aa22.39■■□□□ 1.18
TRAM1-201ENST00000262213 SPRYD3Q8NCJ5 442 aa22.39■■□□□ 1.18
TRAM1-201ENST00000262213 CHGAP10645 457 aaKnown RBP22.39■■□□□ 1.17
TRAM1-201ENST00000262213 RLBP1P12271 317 aa22.38■■□□□ 1.17
TRAM1-201ENST00000262213 ERVK-7P63135 1459 aa22.38■■□□□ 1.17
TRAM1-201ENST00000262213 PCDHB15Q9Y5E8 787 aa22.38■■□□□ 1.17
TRAM1-201ENST00000262213 CEP152O94986 1710 aa22.38■■□□□ 1.17
TRAM1-201ENST00000262213 TCP11L2Q8N4U5 519 aa22.36■■□□□ 1.17
TRAM1-201ENST00000262213 UGGT1Q9NYU2 1555 aa22.36■■□□□ 1.17
TRAM1-201ENST00000262213 RARSP54136 660 aaKnown RBP22.36■■□□□ 1.17
TRAM1-201ENST00000262213 ABCC1P33527 1531 aa22.35■■□□□ 1.17
TRAM1-201ENST00000262213 PDZRN3Q9UPQ7 1066 aa22.34■■□□□ 1.17
TRAM1-201ENST00000262213 TRAK1Q9UPV9 953 aa22.34■■□□□ 1.17
TRAM1-201ENST00000262213 SLC12A5Q9H2X9 1139 aa22.34■■□□□ 1.17
TRAM1-201ENST00000262213 PTPRTO14522 1441 aa22.33■■□□□ 1.17
TRAM1-201ENST00000262213 STAC3Q96MF2 364 aa22.33■■□□□ 1.17
TRAM1-201ENST00000262213 KANK1Q14678 1352 aa22.33■■□□□ 1.17
TRAM1-201ENST00000262213 UPF2Q9HAU5 1272 aaKnown RBP22.33■■□□□ 1.17
TRAM1-201ENST00000262213 VIRMAQ69YN4 1812 aaKnown RBP22.32■■□□□ 1.16
TRAM1-201ENST00000262213 PMFBP1Q8TBY8 1022 aa22.32■■□□□ 1.16
TRAM1-201ENST00000262213 RUNDC1Q96C34 613 aa22.32■■□□□ 1.16
TRAM1-201ENST00000262213 NSD3Q9BZ95 1437 aa22.31■■□□□ 1.16
TRAM1-201ENST00000262213 NGEFQ8N5V2 710 aa22.3■■□□□ 1.16
TRAM1-201ENST00000262213 POLR3AO14802 1390 aaPredicted RBP22.29■■□□□ 1.16
TRAM1-201ENST00000262213 NINLQ9Y2I6 1382 aa22.29■■□□□ 1.16
TRAM1-201ENST00000262213 MTHFSP49914 203 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms