RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 AFAP1Q8N556 730 aa20.15■□□□□ 0.82
SREBF1-201ENST00000261646 LNPKQ9C0E8 428 aa20.15■□□□□ 0.82
SREBF1-201ENST00000261646 R3HCC1Q9Y3T6 440 aaKnown RBP20.15■□□□□ 0.82
SREBF1-201ENST00000261646 MCM4P33991 863 aa20.14■□□□□ 0.82
SREBF1-201ENST00000261646 MIA2Q96PC5 1412 aa20.14■□□□□ 0.82
SREBF1-201ENST00000261646 ANKRD30BQ9BXX2 1392 aa20.14■□□□□ 0.82
SREBF1-201ENST00000261646 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.14■□□□□ 0.81
SREBF1-201ENST00000261646 NASPP49321 788 aaPredicted RBP20.14■□□□□ 0.81
SREBF1-201ENST00000261646 GRIN2BQ13224 1484 aa20.14■□□□□ 0.81
SREBF1-201ENST00000261646 ESPNB1AK53 854 aa20.13■□□□□ 0.81
SREBF1-201ENST00000261646 PPP2R1AP30153 589 aa20.13■□□□□ 0.81
SREBF1-201ENST00000261646 ELL2O00472 640 aaPredicted RBP20.13■□□□□ 0.81
SREBF1-201ENST00000261646 ST18O60284 1047 aa20.12■□□□□ 0.81
SREBF1-201ENST00000261646 EIF3AQ14152 1382 aaKnown RBP20.12■□□□□ 0.81
SREBF1-201ENST00000261646 MAP3K1Q13233 1512 aa20.12■□□□□ 0.81
SREBF1-201ENST00000261646 KCNJ4P48050 445 aa20.11■□□□□ 0.81
SREBF1-201ENST00000261646 RBM10P98175 930 aaKnown RBP20.11■□□□□ 0.81
SREBF1-201ENST00000261646 NGEFQ8N5V2 710 aa20.11■□□□□ 0.81
SREBF1-201ENST00000261646 GRPEL1Q9HAV7 217 aa20.11■□□□□ 0.81
SREBF1-201ENST00000261646 DDX19BQ9UMR2 479 aa20.1■□□□□ 0.81
SREBF1-201ENST00000261646 KIAA1107Q9UPP5 1409 aa20.1■□□□□ 0.81
SREBF1-201ENST00000261646 PDE3AQ14432 1141 aa20.09■□□□□ 0.81
SREBF1-201ENST00000261646 RRP9O43818 475 aaKnown RBP20.09■□□□□ 0.81
SREBF1-201ENST00000261646 C14orf37Q86TY3 774 aa20.08■□□□□ 0.81
SREBF1-201ENST00000261646 MCTP1Q6DN14 999 aa20.08■□□□□ 0.8
SREBF1-201ENST00000261646 ABCC5O15440 1437 aa20.07■□□□□ 0.8
SREBF1-201ENST00000261646 SUPT6HQ7KZ85 1726 aaKnown RBP20.07■□□□□ 0.8
SREBF1-201ENST00000261646 WASHC2CQ9Y4E1 1318 aa20.07■□□□□ 0.8
SREBF1-201ENST00000261646 TPM2P07951 284 aa20.06■□□□□ 0.8
SREBF1-201ENST00000261646 URB2Q14146 1524 aaKnown RBP20.06■□□□□ 0.8
SREBF1-201ENST00000261646 PTPN23Q9H3S7 1636 aa20.06■□□□□ 0.8
SREBF1-201ENST00000261646 OS9Q13438 667 aaPredicted RBP20.05■□□□□ 0.8
SREBF1-201ENST00000261646 CFAP70Q5T0N1 1121 aa20.05■□□□□ 0.8
SREBF1-201ENST00000261646 TROQ12816 1431 aaPredicted RBP20.04■□□□□ 0.8
SREBF1-201ENST00000261646 RUNDC1Q96C34 613 aa20.04■□□□□ 0.8
SREBF1-201ENST00000261646 TMEM132EQ6IEE7 984 aa20.03■□□□□ 0.8
SREBF1-201ENST00000261646 KIAA1211Q6ZU35 1233 aa20.03■□□□□ 0.8
SREBF1-201ENST00000261646 C9orf84Q5VXU9 1444 aa20.03■□□□□ 0.8
SREBF1-201ENST00000261646 PLB1Q6P1J6 1458 aa20.03■□□□□ 0.8
SREBF1-201ENST00000261646 TRIM6-TRIM34B2RNG4 842 aa20.02■□□□□ 0.8
SREBF1-201ENST00000261646 TCP11L2Q8N4U5 519 aa20.02■□□□□ 0.8
SREBF1-201ENST00000261646 RNF214Q8ND24 703 aa20.02■□□□□ 0.8
SREBF1-201ENST00000261646 FGD1P98174 961 aa20.02■□□□□ 0.8
SREBF1-201ENST00000261646 AAMPQ13685 434 aa20.02■□□□□ 0.8
SREBF1-201ENST00000261646 CAVIN1Q6NZI2 390 aaKnown RBP20.02■□□□□ 0.79
SREBF1-201ENST00000261646 CSPP1Q1MSJ5 1256 aa20.01■□□□□ 0.79
SREBF1-201ENST00000261646 SNAPC4Q5SXM2 1469 aa20.01■□□□□ 0.79
SREBF1-201ENST00000261646 PHF14O94880 888 aa20■□□□□ 0.79
SREBF1-201ENST00000261646 HAP1P54257 671 aaPredicted RBP20■□□□□ 0.79
SREBF1-201ENST00000261646 TAOK2Q9UL54 1235 aa20■□□□□ 0.79
SREBF1-201ENST00000261646 GOLGA6L6A8MZA4 724 aa20■□□□□ 0.79
SREBF1-201ENST00000261646 NUCB2P80303 420 aa19.99■□□□□ 0.79
SREBF1-201ENST00000261646 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.99■□□□□ 0.79
SREBF1-201ENST00000261646 NRDCO43847 1150 aa19.99■□□□□ 0.79
SREBF1-201ENST00000261646 SLFN5Q08AF3 891 aa19.99■□□□□ 0.79
SREBF1-201ENST00000261646 MAP7D2Q96T17 732 aa19.98■□□□□ 0.79
SREBF1-201ENST00000261646 TBC1D2Q9BYX2 928 aa19.98■□□□□ 0.79
SREBF1-201ENST00000261646 NUTM2FA1L443 756 aa19.98■□□□□ 0.79
SREBF1-201ENST00000261646 CCDC173Q0VFZ6 552 aa19.97■□□□□ 0.79
SREBF1-201ENST00000261646 SLC4A10Q6U841 1118 aa19.97■□□□□ 0.79
SREBF1-201ENST00000261646 ISY1Q9ULR0 285 aaKnown RBP19.97■□□□□ 0.79
SREBF1-201ENST00000261646 HDGFL2Q7Z4V5 671 aaPredicted RBP19.97■□□□□ 0.79
SREBF1-201ENST00000261646 ZMYND15Q9H091 742 aa19.97■□□□□ 0.79
SREBF1-201ENST00000261646 A0A0U1RQG5 324 aaPredicted RBP19.97■□□□□ 0.79
SREBF1-201ENST00000261646 NAP1L2Q9ULW6 460 aaPredicted RBP19.96■□□□□ 0.79
SREBF1-201ENST00000261646 HECW1Q76N89 1606 aa19.96■□□□□ 0.79
SREBF1-201ENST00000261646 ZNF608Q9ULD9 1512 aaPredicted RBP19.95■□□□□ 0.78
SREBF1-201ENST00000261646 HMMRO75330 724 aa19.95■□□□□ 0.78
SREBF1-201ENST00000261646 DUSP27Q5VZP5 1158 aa19.93■□□□□ 0.78
SREBF1-201ENST00000261646 RIPK4P57078 832 aa19.93■□□□□ 0.78
SREBF1-201ENST00000261646 ARHGEF11O15085 1522 aa19.93■□□□□ 0.78
SREBF1-201ENST00000261646 RPRD2Q5VT52 1461 aaKnown RBP19.93■□□□□ 0.78
SREBF1-201ENST00000261646 ROCK1Q13464 1354 aa19.93■□□□□ 0.78
SREBF1-201ENST00000261646 PANK2Q9BZ23 570 aa19.92■□□□□ 0.78
SREBF1-201ENST00000261646 IQGAP2Q13576 1575 aa19.92■□□□□ 0.78
SREBF1-201ENST00000261646 THOC2Q8NI27 1593 aaKnown RBP19.92■□□□□ 0.78
SREBF1-201ENST00000261646 MINK1Q8N4C8 1332 aaPredicted RBP19.92■□□□□ 0.78
SREBF1-201ENST00000261646 C8orf34Q49A92 452 aa19.92■□□□□ 0.78
SREBF1-201ENST00000261646 PRPF40AO75400 957 aaKnown RBP19.91■□□□□ 0.78
SREBF1-201ENST00000261646 XRCC6P12956 609 aaKnown RBP eCLIP19.91■□□□□ 0.783e-7■■□□□ 13.3
SREBF1-201ENST00000261646 MTHFSP49914 203 aa19.91■□□□□ 0.78
SREBF1-201ENST00000261646 RILPL2Q969X0 211 aa19.91■□□□□ 0.78
SREBF1-201ENST00000261646 SLC12A5Q9H2X9 1139 aa19.91■□□□□ 0.78
SREBF1-201ENST00000261646 REC8O95072 547 aa19.9■□□□□ 0.78
SREBF1-201ENST00000261646 MRC2Q9UBG0 1479 aa19.9■□□□□ 0.78
SREBF1-201ENST00000261646 IGHDP01880 384 aa19.9■□□□□ 0.78
SREBF1-201ENST00000261646 MPNDQ8N594 471 aa19.9■□□□□ 0.78
SREBF1-201ENST00000261646 TERF2IPQ9NYB0 399 aa19.9■□□□□ 0.78
SREBF1-201ENST00000261646 EXOSC9Q06265 439 aaKnown RBP19.89■□□□□ 0.78
SREBF1-201ENST00000261646 KIAA0586Q9BVV6 1533 aa19.89■□□□□ 0.77
SREBF1-201ENST00000261646 ZNF771Q7L3S4 317 aaPredicted RBP19.89■□□□□ 0.77
SREBF1-201ENST00000261646 MTERF4Q7Z6M4 381 aaKnown RBP19.89■□□□□ 0.77
SREBF1-201ENST00000261646 TSR2Q969E8 191 aaKnown RBP19.89■□□□□ 0.77
SREBF1-201ENST00000261646 KIF16BQ96L93 1317 aa19.88■□□□□ 0.77
SREBF1-201ENST00000261646 ZSCAN30Q86W11 494 aa19.88■□□□□ 0.77
SREBF1-201ENST00000261646 RTF1Q92541 710 aaKnown RBP19.88■□□□□ 0.77
SREBF1-201ENST00000261646 CAMSAP2Q08AD1 1489 aa19.88■□□□□ 0.77
SREBF1-201ENST00000261646 GGNBP2Q9H3C7 697 aa19.87■□□□□ 0.77
SREBF1-201ENST00000261646 CCDC39Q9UFE4 941 aa19.87■□□□□ 0.77
SREBF1-201ENST00000261646 CUL7Q14999 1698 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms