RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 ZNF326Q5BKZ1 582 aaKnown RBP26.42■■□□□ 1.82
COL4A3BP-201ENST00000261415 CHGAP10645 457 aaKnown RBP26.42■■□□□ 1.82
COL4A3BP-201ENST00000261415 PRAG1Q86YV5 1406 aa26.42■■□□□ 1.82
COL4A3BP-201ENST00000261415 RALGAPBQ86X10 1494 aa26.38■■□□□ 1.81
COL4A3BP-201ENST00000261415 TNRQ92752 1358 aa26.38■■□□□ 1.81
COL4A3BP-201ENST00000261415 MYOM2P54296 1465 aa26.38■■□□□ 1.81
COL4A3BP-201ENST00000261415 KDM5AP29375 1690 aaKnown RBP26.38■■□□□ 1.81
COL4A3BP-201ENST00000261415 CEBPAP49715 358 aaPredicted RBP26.37■■□□□ 1.81
COL4A3BP-201ENST00000261415 NEXMIFQ5QGS0 1516 aa26.37■■□□□ 1.81
COL4A3BP-201ENST00000261415 STAC3Q96MF2 364 aa26.35■■□□□ 1.81
COL4A3BP-201ENST00000261415 UBR1Q8IWV7 1749 aa26.35■■□□□ 1.81
COL4A3BP-201ENST00000261415 KIAA1210Q9ULL0 1709 aa26.33■■□□□ 1.81
COL4A3BP-201ENST00000261415 MYO3AQ8NEV4 1616 aa26.31■■□□□ 1.8
COL4A3BP-201ENST00000261415 RPGRIP1LQ68CZ1 1315 aa26.31■■□□□ 1.8
COL4A3BP-201ENST00000261415 A2ML1A8K2U0 1454 aa26.31■■□□□ 1.8
COL4A3BP-201ENST00000261415 NRXN1Q9ULB1 1477 aa26.3■■□□□ 1.8
COL4A3BP-201ENST00000261415 NLRP1Q9C000 1473 aa26.3■■□□□ 1.8
COL4A3BP-201ENST00000261415 PLPPR3Q6T4P5 718 aa26.29■■□□□ 1.8
COL4A3BP-201ENST00000261415 LAMC1P11047 1609 aa26.29■■□□□ 1.8
COL4A3BP-201ENST00000261415 STAG3Q9UJ98 1225 aa26.27■■□□□ 1.8
COL4A3BP-201ENST00000261415 SETD1BQ9UPS6 1966 aaKnown RBP26.26■■□□□ 1.79
COL4A3BP-201ENST00000261415 ADGRF5Q8IZF2 1346 aa26.26■■□□□ 1.79
COL4A3BP-201ENST00000261415 ROCK2O75116 1388 aaKnown RBP26.24■■□□□ 1.79
COL4A3BP-201ENST00000261415 PIK3C2GO75747 1445 aa26.23■■□□□ 1.79
COL4A3BP-201ENST00000261415 ZFYVE9O95405 1425 aa26.22■■□□□ 1.79
COL4A3BP-201ENST00000261415 GPRASP1Q5JY77 1395 aa26.21■■□□□ 1.79
COL4A3BP-201ENST00000261415 PTPRMP28827 1452 aa26.21■■□□□ 1.79
COL4A3BP-201ENST00000261415 ZNF142P52746 1687 aaPredicted RBP26.2■■□□□ 1.79
COL4A3BP-201ENST00000261415 EIF4G2P78344 907 aaKnown RBP eCLIP26.19■■□□□ 1.78
COL4A3BP-201ENST00000261415 NBPF1Q3BBV0 1214 aa26.19■■□□□ 1.78
COL4A3BP-201ENST00000261415 VGFO15240 615 aaPredicted RBP26.19■■□□□ 1.78
COL4A3BP-201ENST00000261415 NUTM2DQ5VT03 806 aaPredicted RBP26.19■■□□□ 1.78
COL4A3BP-201ENST00000261415 CARD11Q9BXL7 1154 aa26.19■■□□□ 1.78
COL4A3BP-201ENST00000261415 RBM19Q9Y4C8 960 aaKnown RBP26.19■■□□□ 1.78
COL4A3BP-201ENST00000261415 IQGAP1P46940 1657 aa26.19■■□□□ 1.78
COL4A3BP-201ENST00000261415 HIRIP3Q9BW71 556 aaPredicted RBP26.18■■□□□ 1.78
COL4A3BP-201ENST00000261415 CEP170BQ9Y4F5 1589 aaPredicted RBP26.18■■□□□ 1.78
COL4A3BP-201ENST00000261415 RIMS2Q9UQ26 1411 aa26.18■■□□□ 1.78
COL4A3BP-201ENST00000261415 HSPA5P11021 654 aaKnown RBP26.17■■□□□ 1.78
COL4A3BP-201ENST00000261415 USP47Q96K76 1375 aa26.17■■□□□ 1.78
COL4A3BP-201ENST00000261415 POLR1AO95602 1720 aaPredicted RBP26.15■■□□□ 1.78
COL4A3BP-201ENST00000261415 SETBP1Q9Y6X0 1596 aa26.15■■□□□ 1.78
COL4A3BP-201ENST00000261415 CFAP70Q5T0N1 1121 aa26.13■■□□□ 1.77
COL4A3BP-201ENST00000261415 TMEM2Q9UHN6 1383 aa26.12■■□□□ 1.77
COL4A3BP-201ENST00000261415 SLIT1O75093 1534 aa26.1■■□□□ 1.77
COL4A3BP-201ENST00000261415 SETD1AO15047 1707 aaKnown RBP26.09■■□□□ 1.77
COL4A3BP-201ENST00000261415 NRXN3Q9Y4C0 1643 aa26.09■■□□□ 1.77
COL4A3BP-201ENST00000261415 C14orf93Q9H972 538 aaKnown RBP26.09■■□□□ 1.77
COL4A3BP-201ENST00000261415 ADGRB1O14514 1584 aa26.09■■□□□ 1.77
COL4A3BP-201ENST00000261415 ARHGAP23Q9P227 1491 aa26.07■■□□□ 1.76
COL4A3BP-201ENST00000261415 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.07■■□□□ 1.76
COL4A3BP-201ENST00000261415 ALKQ9UM73 1620 aa26.06■■□□□ 1.76
COL4A3BP-201ENST00000261415 SCAF11Q99590 1463 aaKnown RBP26.05■■□□□ 1.76
COL4A3BP-201ENST00000261415 HDGFP51858 240 aaKnown RBP26.04■■□□□ 1.76
COL4A3BP-201ENST00000261415 ASXL1Q8IXJ9 1541 aa26.03■■□□□ 1.76
COL4A3BP-201ENST00000261415 THEMISQ8N1K5 641 aaPredicted RBP26.03■■□□□ 1.76
COL4A3BP-201ENST00000261415 SENP3Q9H4L4 574 aaPredicted RBP26.02■■□□□ 1.76
COL4A3BP-201ENST00000261415 ST20-MTHFSA0A0A6YYL1 179 aa26■■□□□ 1.75
COL4A3BP-201ENST00000261415 KDM4FA0A1W2PPD8 638 aa26■■□□□ 1.75
COL4A3BP-201ENST00000261415 ARHGEF28Q8N1W1 1705 aaKnown RBP26■■□□□ 1.75
COL4A3BP-201ENST00000261415 LTKP29376 864 aa25.97■■□□□ 1.75
COL4A3BP-201ENST00000261415 TMEM132EQ6IEE7 984 aa25.97■■□□□ 1.75
COL4A3BP-201ENST00000261415 EIF3AQ14152 1382 aaKnown RBP25.96■■□□□ 1.75
COL4A3BP-201ENST00000261415 TXNDC2Q86VQ3 553 aa25.95■■□□□ 1.75
COL4A3BP-201ENST00000261415 EID1Q9Y6B2 187 aa25.95■■□□□ 1.75
COL4A3BP-201ENST00000261415 PLEKHG1Q9ULL1 1385 aa25.95■■□□□ 1.75
COL4A3BP-201ENST00000261415 FANCIQ9NVI1 1328 aa25.94■■□□□ 1.74
COL4A3BP-201ENST00000261415 QRICH2Q9H0J4 1663 aa25.94■■□□□ 1.74
COL4A3BP-201ENST00000261415 C11orf95C9JLR9 678 aaPredicted RBP25.93■■□□□ 1.74
COL4A3BP-201ENST00000261415 MSH5O43196 834 aa25.93■■□□□ 1.74
COL4A3BP-201ENST00000261415 WASHC2AQ641Q2 1341 aa25.92■■□□□ 1.74
COL4A3BP-201ENST00000261415 CCDC7Q96M83 1385 aa25.9■■□□□ 1.74
COL4A3BP-201ENST00000261415 ADAMTS13Q76LX8 1427 aa25.9■■□□□ 1.74
COL4A3BP-201ENST00000261415 YTHDC2Q9H6S0 1430 aaKnown RBP25.89■■□□□ 1.74
COL4A3BP-201ENST00000261415 KNDC1Q76NI1 1749 aa25.89■■□□□ 1.74
COL4A3BP-201ENST00000261415 TESK2Q96S53 571 aa25.89■■□□□ 1.73
COL4A3BP-201ENST00000261415 TRAK1Q9UPV9 953 aa25.89■■□□□ 1.73
COL4A3BP-201ENST00000261415 BCANQ96GW7 911 aa25.88■■□□□ 1.73
COL4A3BP-201ENST00000261415 KIF7Q2M1P5 1343 aa25.88■■□□□ 1.73
COL4A3BP-201ENST00000261415 DIP2AQ14689 1571 aa25.87■■□□□ 1.73
COL4A3BP-201ENST00000261415 FKBP8Q14318 412 aa25.87■■□□□ 1.73
COL4A3BP-201ENST00000261415 MED14O60244 1454 aa25.86■■□□□ 1.73
COL4A3BP-201ENST00000261415 ERICH6BQ5W0A0 696 aa25.86■■□□□ 1.73
COL4A3BP-201ENST00000261415 METP08581 1390 aa25.85■■□□□ 1.73
COL4A3BP-201ENST00000261415 DDX10Q13206 875 aaKnown RBP25.84■■□□□ 1.73
COL4A3BP-201ENST00000261415 ANKLE2Q86XL3 938 aa25.83■■□□□ 1.72
COL4A3BP-201ENST00000261415 ANO8Q9HCE9 1232 aaPredicted RBP25.83■■□□□ 1.72
COL4A3BP-201ENST00000261415 STK26Q9P289 416 aa25.83■■□□□ 1.72
COL4A3BP-201ENST00000261415 DLC1Q96QB1 1528 aa25.82■■□□□ 1.72
COL4A3BP-201ENST00000261415 CENPJQ9HC77 1338 aaPredicted RBP25.82■■□□□ 1.72
COL4A3BP-201ENST00000261415 DISP3Q9P2K9 1392 aa25.82■■□□□ 1.72
COL4A3BP-201ENST00000261415 LRPPRCP42704 1394 aaKnown RBP25.81■■□□□ 1.72
COL4A3BP-201ENST00000261415 NEFLP07196 543 aa25.81■■□□□ 1.72
COL4A3BP-201ENST00000261415 SBNO2Q9Y2G9 1366 aa25.81■■□□□ 1.72
COL4A3BP-201ENST00000261415 DEKP35659 375 aaKnown RBP25.8■■□□□ 1.72
COL4A3BP-201ENST00000261415 TMF1P82094 1093 aa25.79■■□□□ 1.72
COL4A3BP-201ENST00000261415 CPS1P31327 1500 aa25.78■■□□□ 1.72
COL4A3BP-201ENST00000261415 SLC26A8Q96RN1 970 aa25.78■■□□□ 1.72
COL4A3BP-201ENST00000261415 ABCC11Q96J66 1382 aa25.77■■□□□ 1.72
COL4A3BP-201ENST00000261415 LMTK3Q96Q04 1460 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms