RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 DDRGK1Q96HY6 314 aa17.51■□□□□ 0.39
VHL-201ENST00000256474 CROCC2H7BZ55 1655 aa17.51■□□□□ 0.39
VHL-201ENST00000256474 CENPQQ7L2Z9 268 aaPredicted RBP17.51■□□□□ 0.39
VHL-201ENST00000256474 STK26Q9P289 416 aa17.51■□□□□ 0.39
VHL-201ENST00000256474 POLR1AO95602 1720 aaPredicted RBP17.5■□□□□ 0.39
VHL-201ENST00000256474 PPM1GO15355 546 aaPredicted RBP17.5■□□□□ 0.39
VHL-201ENST00000256474 WASHC2CQ9Y4E1 1318 aa17.5■□□□□ 0.39
VHL-201ENST00000256474 MAGI2Q86UL8 1455 aa17.49■□□□□ 0.39
VHL-201ENST00000256474 SLKQ9H2G2 1235 aaPredicted RBP17.49■□□□□ 0.39
VHL-201ENST00000256474 SLFN5Q08AF3 891 aa17.48■□□□□ 0.39
VHL-201ENST00000256474 FAM161AQ3B820 660 aa17.48■□□□□ 0.39
VHL-201ENST00000256474 SCAPERQ9BY12 1400 aa17.47■□□□□ 0.39
VHL-201ENST00000256474 TNNQ9UQP3 1299 aa17.47■□□□□ 0.39
VHL-201ENST00000256474 CARD14Q9BXL6 1004 aa17.47■□□□□ 0.39
VHL-201ENST00000256474 U2SURPO15042 1029 aaKnown RBP17.46■□□□□ 0.39
VHL-201ENST00000256474 NFKBIBQ15653 356 aa17.46■□□□□ 0.39
VHL-201ENST00000256474 TTC37Q6PGP7 1564 aa17.46■□□□□ 0.39
VHL-201ENST00000256474 KANK1Q14678 1352 aa17.46■□□□□ 0.39
VHL-201ENST00000256474 ADCY10Q96PN6 1610 aa17.45■□□□□ 0.38
VHL-201ENST00000256474 CENPJQ9HC77 1338 aaPredicted RBP17.45■□□□□ 0.38
VHL-201ENST00000256474 IGHDP01880 384 aa17.45■□□□□ 0.38
VHL-201ENST00000256474 ERCC6L2Q5T890 1561 aa17.45■□□□□ 0.38
VHL-201ENST00000256474 GPRASP1Q5JY77 1395 aa17.44■□□□□ 0.38
VHL-201ENST00000256474 U2AF1L5P0DN76 240 aaPredicted RBP17.44■□□□□ 0.38
VHL-201ENST00000256474 U2AF1Q01081 240 aaKnown RBP eCLIP17.44■□□□□ 0.38
VHL-201ENST00000256474 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.43■□□□□ 0.385e-7■■□□□ 12.4
VHL-201ENST00000256474 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.43■□□□□ 0.38
VHL-201ENST00000256474 BRPF3Q9ULD4 1205 aa17.43■□□□□ 0.38
VHL-201ENST00000256474 FRAT2O75474 233 aaPredicted RBP17.42■□□□□ 0.38
VHL-201ENST00000256474 E9PSI1 815 aa17.42■□□□□ 0.38
VHL-201ENST00000256474 MTHFSP49914 203 aa17.41■□□□□ 0.38
VHL-201ENST00000256474 TRPM1Q7Z4N2 1603 aa17.41■□□□□ 0.38
VHL-201ENST00000256474 CDC42BPBQ9Y5S2 1711 aa17.41■□□□□ 0.38
VHL-201ENST00000256474 TCP11L2Q8N4U5 519 aa17.41■□□□□ 0.38
VHL-201ENST00000256474 BLMP54132 1417 aaPredicted RBP17.4■□□□□ 0.38
VHL-201ENST00000256474 EIF3AQ14152 1382 aaKnown RBP17.4■□□□□ 0.38
VHL-201ENST00000256474 C8orf34Q49A92 452 aa17.4■□□□□ 0.38
VHL-201ENST00000256474 ARHGEF5Q12774 1597 aa17.39■□□□□ 0.37
VHL-201ENST00000256474 WWC1Q8IX03 1113 aa17.38■□□□□ 0.37
VHL-201ENST00000256474 EIF5BO60841 1220 aaKnown RBP17.38■□□□□ 0.37
VHL-201ENST00000256474 CABP2Q9NPB3 220 aa17.38■□□□□ 0.37
VHL-201ENST00000256474 WDR7Q9Y4E6 1490 aa17.38■□□□□ 0.37
VHL-201ENST00000256474 KDM2BQ8NHM5 1336 aa17.38■□□□□ 0.37
VHL-201ENST00000256474 SEC24BO95487 1268 aa17.37■□□□□ 0.37
VHL-201ENST00000256474 SRPK2P78362 688 aaKnown RBP17.37■□□□□ 0.37
VHL-201ENST00000256474 TSR2Q969E8 191 aaKnown RBP17.37■□□□□ 0.37
VHL-201ENST00000256474 FTSJ3Q8IY81 847 aaKnown RBP17.36■□□□□ 0.37
VHL-201ENST00000256474 PLCH2O75038 1416 aa17.36■□□□□ 0.37
VHL-201ENST00000256474 NPM1P06748 294 aaKnown RBP eCLIP17.36■□□□□ 0.37
VHL-201ENST00000256474 ANO8Q9HCE9 1232 aaPredicted RBP17.35■□□□□ 0.37
VHL-201ENST00000256474 SCAF11Q99590 1463 aaKnown RBP17.35■□□□□ 0.37
VHL-201ENST00000256474 ZMYM4Q5VZL5 1548 aa17.35■□□□□ 0.37
VHL-201ENST00000256474 GSE1Q14687 1217 aa17.35■□□□□ 0.37
VHL-201ENST00000256474 UGGT1Q9NYU2 1555 aa17.35■□□□□ 0.37
VHL-201ENST00000256474 DUOX2Q9NRD8 1548 aa17.34■□□□□ 0.37
VHL-201ENST00000256474 CFAP53Q96M91 514 aa17.34■□□□□ 0.37
VHL-201ENST00000256474 GGNBP2Q9H3C7 697 aa17.34■□□□□ 0.37
VHL-201ENST00000256474 PRDM15P57071 1507 aaPredicted RBP17.34■□□□□ 0.37
VHL-201ENST00000256474 PREX2Q70Z35 1606 aa17.34■□□□□ 0.37
VHL-201ENST00000256474 RLBP1P12271 317 aa17.33■□□□□ 0.36
VHL-201ENST00000256474 NSD3Q9BZ95 1437 aa17.32■□□□□ 0.36
VHL-201ENST00000256474 ZNF521Q96K83 1311 aa17.31■□□□□ 0.36
VHL-201ENST00000256474 UPF2Q9HAU5 1272 aaKnown RBP17.31■□□□□ 0.36
VHL-201ENST00000256474 USP35Q9P2H5 1018 aa17.31■□□□□ 0.36
VHL-201ENST00000256474 ASXL1Q8IXJ9 1541 aa17.3■□□□□ 0.36
VHL-201ENST00000256474 FBLN1P23142 703 aa17.3■□□□□ 0.36
VHL-201ENST00000256474 RUNDC1Q96C34 613 aa17.3■□□□□ 0.36
VHL-201ENST00000256474 MINK1Q8N4C8 1332 aaPredicted RBP17.3■□□□□ 0.36
VHL-201ENST00000256474 NKTRP30414 1462 aaKnown RBP17.29■□□□□ 0.36
VHL-201ENST00000256474 SMC4Q9NTJ3 1288 aa17.29■□□□□ 0.36
VHL-201ENST00000256474 PCDHB15Q9Y5E8 787 aa17.29■□□□□ 0.36
VHL-201ENST00000256474 ITPRIPQ8IWB1 547 aa17.29■□□□□ 0.36
VHL-201ENST00000256474 GZF1Q9H116 711 aaPredicted RBP17.29■□□□□ 0.36
VHL-201ENST00000256474 ATP10AO60312 1499 aa17.29■□□□□ 0.36
VHL-201ENST00000256474 STAG3Q9UJ98 1225 aa17.29■□□□□ 0.36
VHL-201ENST00000256474 CGNL1Q0VF96 1302 aa17.29■□□□□ 0.36
VHL-201ENST00000256474 RAPGEF3O95398 923 aa17.28■□□□□ 0.36
VHL-201ENST00000256474 NOS1P29475 1434 aa17.28■□□□□ 0.36
VHL-201ENST00000256474 MFAP1P55081 439 aaKnown RBP17.28■□□□□ 0.36
VHL-201ENST00000256474 CFAP65Q6ZU64 1925 aaKnown RBP17.28■□□□□ 0.36
VHL-201ENST00000256474 MAST1Q9Y2H9 1570 aa17.28■□□□□ 0.36
VHL-201ENST00000256474 E9PCH4 1651 aa17.28■□□□□ 0.36
VHL-201ENST00000256474 ELL2O00472 640 aaPredicted RBP17.27■□□□□ 0.36
VHL-201ENST00000256474 PDZRN3Q9UPQ7 1066 aa17.27■□□□□ 0.36
VHL-201ENST00000256474 RARSP54136 660 aaKnown RBP17.27■□□□□ 0.35
VHL-201ENST00000256474 POGKQ9P215 609 aa17.27■□□□□ 0.35
VHL-201ENST00000256474 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.26■□□□□ 0.35
VHL-201ENST00000256474 ABCC2Q92887 1545 aa17.26■□□□□ 0.35
VHL-201ENST00000256474 MAPK8IP3Q9UPT6 1336 aa17.25■□□□□ 0.35
VHL-201ENST00000256474 PRKCSHP14314 528 aaPredicted RBP17.25■□□□□ 0.35
VHL-201ENST00000256474 EIF2AK4Q9P2K8 1649 aaKnown RBP17.24■□□□□ 0.35
VHL-201ENST00000256474 BECN1Q14457 450 aa17.24■□□□□ 0.35
VHL-201ENST00000256474 FANCAO15360 1455 aa17.24■□□□□ 0.35
VHL-201ENST00000256474 EXOSC9Q06265 439 aaKnown RBP17.24■□□□□ 0.35
VHL-201ENST00000256474 MYO5CQ9NQX4 1742 aa17.23■□□□□ 0.35
VHL-201ENST00000256474 PDE3AQ14432 1141 aa17.22■□□□□ 0.35
VHL-201ENST00000256474 CHD1O14646 1710 aa17.22■□□□□ 0.35
VHL-201ENST00000256474 UNC13BO14795 1591 aa17.22■□□□□ 0.35
VHL-201ENST00000256474 ADGRL1O94910 1474 aa17.21■□□□□ 0.35
VHL-201ENST00000256474 IQGAP3Q86VI3 1631 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms