RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 IDI1Q13907 227 aa13.38□□□□□ -0.27
NIP7-202ENST00000254941 KIAA1210Q9ULL0 1709 aa13.37□□□□□ -0.27
NIP7-202ENST00000254941 DIEXFQ68CQ4 756 aaKnown RBP13.37□□□□□ -0.27
NIP7-202ENST00000254941 LAMC1P11047 1609 aa13.37□□□□□ -0.27
NIP7-202ENST00000254941 HSPA5P11021 654 aaKnown RBP13.36□□□□□ -0.27
NIP7-202ENST00000254941 HIRIP3Q9BW71 556 aaPredicted RBP13.36□□□□□ -0.27
NIP7-202ENST00000254941 C3P01024 1663 aa13.35□□□□□ -0.27
NIP7-202ENST00000254941 ROCK2O75116 1388 aaKnown RBP13.35□□□□□ -0.27
NIP7-202ENST00000254941 GPRASP1Q5JY77 1395 aa13.35□□□□□ -0.27
NIP7-202ENST00000254941 RPGRIP1LQ68CZ1 1315 aa13.35□□□□□ -0.27
NIP7-202ENST00000254941 CHGAP10645 457 aaKnown RBP13.35□□□□□ -0.27
NIP7-202ENST00000254941 POLR1AO95602 1720 aaPredicted RBP13.34□□□□□ -0.27
NIP7-202ENST00000254941 NRXN1Q9ULB1 1477 aa13.34□□□□□ -0.27
NIP7-202ENST00000254941 DCAF8L1A6NGE4 600 aa13.34□□□□□ -0.27
NIP7-202ENST00000254941 USP47Q96K76 1375 aa13.34□□□□□ -0.27
NIP7-202ENST00000254941 CARD11Q9BXL7 1154 aa13.33□□□□□ -0.27
NIP7-202ENST00000254941 NEXMIFQ5QGS0 1516 aa13.33□□□□□ -0.28
NIP7-202ENST00000254941 NBPF1Q3BBV0 1214 aa13.32□□□□□ -0.28
NIP7-202ENST00000254941 KDM5AP29375 1690 aaKnown RBP13.32□□□□□ -0.28
NIP7-202ENST00000254941 ADGRF5Q8IZF2 1346 aa13.31□□□□□ -0.28
NIP7-202ENST00000254941 TNRQ92752 1358 aa13.3□□□□□ -0.28
NIP7-202ENST00000254941 ADAMTSL3P82987 1691 aa13.3□□□□□ -0.28
NIP7-202ENST00000254941 PIK3C2GO75747 1445 aa13.29□□□□□ -0.28
NIP7-202ENST00000254941 ZFYVE9O95405 1425 aa13.29□□□□□ -0.28
NIP7-202ENST00000254941 IQGAP1P46940 1657 aa13.29□□□□□ -0.28
NIP7-202ENST00000254941 A2ML1A8K2U0 1454 aa13.29□□□□□ -0.28
NIP7-202ENST00000254941 VGFO15240 615 aaPredicted RBP13.29□□□□□ -0.28
NIP7-202ENST00000254941 UBR1Q8IWV7 1749 aa13.27□□□□□ -0.28
NIP7-202ENST00000254941 SETBP1Q9Y6X0 1596 aa13.27□□□□□ -0.28
NIP7-202ENST00000254941 RIMS1Q86UR5 1692 aaKnown RBP13.27□□□□□ -0.28
NIP7-202ENST00000254941 STAG3Q9UJ98 1225 aa13.27□□□□□ -0.29
NIP7-202ENST00000254941 NLRP1Q9C000 1473 aa13.26□□□□□ -0.29
NIP7-202ENST00000254941 CEBPAP49715 358 aaPredicted RBP13.26□□□□□ -0.29
NIP7-202ENST00000254941 WASHC2AQ641Q2 1341 aa13.26□□□□□ -0.29
NIP7-202ENST00000254941 ST20-MTHFSA0A0A6YYL1 179 aa13.25□□□□□ -0.29
NIP7-202ENST00000254941 CFAP70Q5T0N1 1121 aa13.25□□□□□ -0.29
NIP7-202ENST00000254941 C14orf93Q9H972 538 aaKnown RBP13.25□□□□□ -0.29
NIP7-202ENST00000254941 SETD1BQ9UPS6 1966 aaKnown RBP13.24□□□□□ -0.29
NIP7-202ENST00000254941 C11orf95C9JLR9 678 aaPredicted RBP13.24□□□□□ -0.29
NIP7-202ENST00000254941 DDX10Q13206 875 aaKnown RBP13.24□□□□□ -0.29
NIP7-202ENST00000254941 SCAF11Q99590 1463 aaKnown RBP13.24□□□□□ -0.29
NIP7-202ENST00000254941 CCDC7Q96M83 1385 aa13.24□□□□□ -0.29
NIP7-202ENST00000254941 RNF39Q9H2S5 420 aa13.23□□□□□ -0.29
NIP7-202ENST00000254941 ADGRB1O14514 1584 aa13.22□□□□□ -0.29
NIP7-202ENST00000254941 RIMS2Q9UQ26 1411 aa13.22□□□□□ -0.29
NIP7-202ENST00000254941 NUTM2DQ5VT03 806 aaPredicted RBP13.22□□□□□ -0.29
NIP7-202ENST00000254941 KIF7Q2M1P5 1343 aa13.21□□□□□ -0.29
NIP7-202ENST00000254941 MYO3AQ8NEV4 1616 aa13.21□□□□□ -0.29
NIP7-202ENST00000254941 TESK2Q96S53 571 aa13.19□□□□□ -0.3
NIP7-202ENST00000254941 EIF3AQ14152 1382 aaKnown RBP13.19□□□□□ -0.3
NIP7-202ENST00000254941 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.19□□□□□ -0.3
NIP7-202ENST00000254941 TMEM2Q9UHN6 1383 aa13.18□□□□□ -0.3
NIP7-202ENST00000254941 ALKQ9UM73 1620 aa13.18□□□□□ -0.3
NIP7-202ENST00000254941 SETD1AO15047 1707 aaKnown RBP13.18□□□□□ -0.3
NIP7-202ENST00000254941 HDGFP51858 240 aaKnown RBP13.18□□□□□ -0.3
NIP7-202ENST00000254941 NRXN3Q9Y4C0 1643 aa13.17□□□□□ -0.3
NIP7-202ENST00000254941 ASXL1Q8IXJ9 1541 aa13.17□□□□□ -0.3
NIP7-202ENST00000254941 MIER1Q8N108 512 aa13.16□□□□□ -0.3
NIP7-202ENST00000254941 ARHGEF28Q8N1W1 1705 aaKnown RBP13.16□□□□□ -0.3
NIP7-202ENST00000254941 ZNF142P52746 1687 aaPredicted RBP13.16□□□□□ -0.3
NIP7-202ENST00000254941 CEP170BQ9Y4F5 1589 aaPredicted RBP13.16□□□□□ -0.3
NIP7-202ENST00000254941 SLIT1O75093 1534 aa13.16□□□□□ -0.3
NIP7-202ENST00000254941 TMEM132EQ6IEE7 984 aa13.16□□□□□ -0.3
NIP7-202ENST00000254941 ARHGAP23Q9P227 1491 aa13.15□□□□□ -0.3
NIP7-202ENST00000254941 THEMISQ8N1K5 641 aaPredicted RBP13.14□□□□□ -0.31
NIP7-202ENST00000254941 PTPRMP28827 1452 aa13.14□□□□□ -0.31
NIP7-202ENST00000254941 QRICH2Q9H0J4 1663 aa13.14□□□□□ -0.31
NIP7-202ENST00000254941 DISP3Q9P2K9 1392 aa13.13□□□□□ -0.31
NIP7-202ENST00000254941 SBNO2Q9Y2G9 1366 aa13.13□□□□□ -0.31
NIP7-202ENST00000254941 SLC24A1O60721 1099 aa13.13□□□□□ -0.31
NIP7-202ENST00000254941 TMF1P82094 1093 aa13.13□□□□□ -0.31
NIP7-202ENST00000254941 TRAK1Q9UPV9 953 aa13.12□□□□□ -0.31
NIP7-202ENST00000254941 YTHDC2Q9H6S0 1430 aaKnown RBP13.11□□□□□ -0.31
NIP7-202ENST00000254941 LTKP29376 864 aa13.11□□□□□ -0.31
NIP7-202ENST00000254941 PLEKHG1Q9ULL1 1385 aa13.11□□□□□ -0.31
NIP7-202ENST00000254941 CENPJQ9HC77 1338 aaPredicted RBP13.11□□□□□ -0.31
NIP7-202ENST00000254941 EID1Q9Y6B2 187 aa13.1□□□□□ -0.31
NIP7-202ENST00000254941 TXNDC2Q86VQ3 553 aa13.1□□□□□ -0.31
NIP7-202ENST00000254941 POLR3GLQ9BT43 218 aa13.1□□□□□ -0.31
NIP7-202ENST00000254941 CDCA8Q53HL2 280 aa13.09□□□□□ -0.31
NIP7-202ENST00000254941 ADAMTS13Q76LX8 1427 aa13.08□□□□□ -0.32
NIP7-202ENST00000254941 KNDC1Q76NI1 1749 aa13.08□□□□□ -0.32
NIP7-202ENST00000254941 C1QBPQ07021 282 aaKnown RBP13.08□□□□□ -0.32
NIP7-202ENST00000254941 DLC1Q96QB1 1528 aa13.08□□□□□ -0.32
NIP7-202ENST00000254941 MED14O60244 1454 aa13.07□□□□□ -0.32
NIP7-202ENST00000254941 LRPPRCP42704 1394 aaKnown RBP13.07□□□□□ -0.32
NIP7-202ENST00000254941 ANP32CO43423 234 aa13.07□□□□□ -0.32
NIP7-202ENST00000254941 STK26Q9P289 416 aa13.07□□□□□ -0.32
NIP7-202ENST00000254941 METP08581 1390 aa13.06□□□□□ -0.32
NIP7-202ENST00000254941 ABCC11Q96J66 1382 aa13.06□□□□□ -0.32
NIP7-202ENST00000254941 MYOM1P52179 1685 aa13.06□□□□□ -0.32
NIP7-202ENST00000254941 DIP2AQ14689 1571 aa13.05□□□□□ -0.32
NIP7-202ENST00000254941 BCANQ96GW7 911 aa13.05□□□□□ -0.32
NIP7-202ENST00000254941 TECPR2O15040 1411 aa13.04□□□□□ -0.32
NIP7-202ENST00000254941 PRAM1Q96QH2 718 aa13.03□□□□□ -0.32
NIP7-202ENST00000254941 CPS1P31327 1500 aa13.02□□□□□ -0.32
NIP7-202ENST00000254941 TULP4Q9NRJ4 1543 aa13.02□□□□□ -0.32
NIP7-202ENST00000254941 ANKLE2Q86XL3 938 aa13.02□□□□□ -0.32
NIP7-202ENST00000254941 TBX22Q9Y458 520 aa13.02□□□□□ -0.32
NIP7-202ENST00000254941 SIRT1Q96EB6 747 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms