RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 WASHC2CQ9Y4E1 1318 aa29.3■■■□□ 2.28
CLN6-201ENST00000249806 MAP3K4Q9Y6R4 1608 aa29.3■■■□□ 2.28
CLN6-201ENST00000249806 MROH2AA6NES4 1674 aa29.29■■■□□ 2.28
CLN6-201ENST00000249806 NPATQ14207 1427 aa29.29■■■□□ 2.28
CLN6-201ENST00000249806 CHGAP10645 457 aaKnown RBP29.29■■■□□ 2.28
CLN6-201ENST00000249806 KIAA1210Q9ULL0 1709 aa29.28■■■□□ 2.28
CLN6-201ENST00000249806 MYOM2P54296 1465 aa29.26■■■□□ 2.28
CLN6-201ENST00000249806 SMG6Q86US8 1419 aaKnown RBP29.25■■■□□ 2.27
CLN6-201ENST00000249806 IFT172Q9UG01 1749 aa29.25■■■□□ 2.27
CLN6-201ENST00000249806 NUDCQ9Y266 331 aa29.22■■■□□ 2.27
CLN6-201ENST00000249806 EIF3AQ14152 1382 aaKnown RBP29.21■■■□□ 2.27
CLN6-201ENST00000249806 CDCA8Q53HL2 280 aa29.21■■■□□ 2.27
CLN6-201ENST00000249806 ABCC3O15438 1527 aa29.21■■■□□ 2.27
CLN6-201ENST00000249806 NOS1P29475 1434 aa29.2■■■□□ 2.26
CLN6-201ENST00000249806 ADGRB3O60242 1522 aa29.2■■■□□ 2.26
CLN6-201ENST00000249806 DIP2CQ9Y2E4 1556 aa29.18■■■□□ 2.26
CLN6-201ENST00000249806 RICTORQ6R327 1708 aa29.17■■■□□ 2.26
CLN6-201ENST00000249806 NRXN1Q9ULB1 1477 aa29.17■■■□□ 2.26
CLN6-201ENST00000249806 ERICH6BQ5W0A0 696 aa29.17■■■□□ 2.26
CLN6-201ENST00000249806 KNSTRNQ9Y448 316 aa29.17■■■□□ 2.26
CLN6-201ENST00000249806 YEATS2Q9ULM3 1422 aa29.14■■■□□ 2.25
CLN6-201ENST00000249806 SALL2Q9Y467 1007 aaPredicted RBP29.13■■■□□ 2.25
CLN6-201ENST00000249806 CAMSAP1Q5T5Y3 1602 aa29.13■■■□□ 2.25
CLN6-201ENST00000249806 SYNMO15061 1565 aa29.12■■■□□ 2.25
CLN6-201ENST00000249806 SIGLEC1Q9BZZ2 1709 aa29.12■■■□□ 2.25
CLN6-201ENST00000249806 AMER1Q5JTC6 1135 aaPredicted RBP29.12■■■□□ 2.25
CLN6-201ENST00000249806 PPP4R2Q9NY27 417 aa29.12■■■□□ 2.25
CLN6-201ENST00000249806 MYOM1P52179 1685 aa29.1■■■□□ 2.25
CLN6-201ENST00000249806 PPLO60437 1756 aa29.1■■■□□ 2.25
CLN6-201ENST00000249806 RIMBP3CA6NJZ7 1639 aa29.09■■■□□ 2.25
CLN6-201ENST00000249806 RIMBP3BA6NNM3 1639 aa29.09■■■□□ 2.25
CLN6-201ENST00000249806 RIMBP3Q9UFD9 1639 aa29.09■■■□□ 2.25
CLN6-201ENST00000249806 FAM69CQ0P6D2 419 aa29.08■■■□□ 2.25
CLN6-201ENST00000249806 ERVK-7P63135 1459 aa29.08■■■□□ 2.25
CLN6-201ENST00000249806 KDM5AP29375 1690 aaKnown RBP29.08■■■□□ 2.25
CLN6-201ENST00000249806 GLI2P10070 1586 aa29.07■■■□□ 2.24
CLN6-201ENST00000249806 C14orf93Q9H972 538 aaKnown RBP29.06■■■□□ 2.24
CLN6-201ENST00000249806 PIK3C2GO75747 1445 aa29.06■■■□□ 2.24
CLN6-201ENST00000249806 NUTM2DQ5VT03 806 aaPredicted RBP29.05■■■□□ 2.24
CLN6-201ENST00000249806 TRAK1Q9UPV9 953 aa29.05■■■□□ 2.24
CLN6-201ENST00000249806 TMEM132EQ6IEE7 984 aa29.05■■■□□ 2.24
CLN6-201ENST00000249806 PPP2R1AP30153 589 aa29.04■■■□□ 2.24
CLN6-201ENST00000249806 RPGRIP1LQ68CZ1 1315 aa29.04■■■□□ 2.24
CLN6-201ENST00000249806 SLC24A1O60721 1099 aa29.04■■■□□ 2.24
CLN6-201ENST00000249806 RNF123Q5XPI4 1314 aa29.03■■■□□ 2.24
CLN6-201ENST00000249806 ASXL1Q8IXJ9 1541 aa29.02■■■□□ 2.24
CLN6-201ENST00000249806 SETBP1Q9Y6X0 1596 aa29.02■■■□□ 2.24
CLN6-201ENST00000249806 B4GALNT3Q6L9W6 998 aa29.01■■■□□ 2.24
CLN6-201ENST00000249806 CENPJQ9HC77 1338 aaPredicted RBP29■■■□□ 2.23
CLN6-201ENST00000249806 IDI1Q13907 227 aa29■■■□□ 2.23
CLN6-201ENST00000249806 PIK3C2BO00750 1634 aa29■■■□□ 2.23
CLN6-201ENST00000249806 MYO3AQ8NEV4 1616 aa28.99■■■□□ 2.23
CLN6-201ENST00000249806 ARHGAP31Q2M1Z3 1444 aa28.98■■■□□ 2.23
CLN6-201ENST00000249806 ADAMTS8Q9UP79 889 aa28.97■■■□□ 2.23
CLN6-201ENST00000249806 TSPOAP1O95153 1857 aa28.97■■■□□ 2.23
CLN6-201ENST00000249806 ADGRB1O14514 1584 aa28.97■■■□□ 2.23
CLN6-201ENST00000249806 BLMP54132 1417 aaPredicted RBP28.97■■■□□ 2.23
CLN6-201ENST00000249806 CARD14Q9BXL6 1004 aa28.96■■■□□ 2.23
CLN6-201ENST00000249806 DIP2BQ9P265 1576 aa28.96■■■□□ 2.23
CLN6-201ENST00000249806 SBNO2Q9Y2G9 1366 aa28.96■■■□□ 2.23
CLN6-201ENST00000249806 ZC3H13Q5T200 1668 aaKnown RBP28.95■■■□□ 2.22
CLN6-201ENST00000249806 CDCA7LQ96GN5 454 aa28.94■■■□□ 2.22
CLN6-201ENST00000249806 INSRP06213 1382 aa28.94■■■□□ 2.22
CLN6-201ENST00000249806 VGFO15240 615 aaPredicted RBP28.93■■■□□ 2.22
CLN6-201ENST00000249806 NPC1L1Q9UHC9 1359 aa28.93■■■□□ 2.22
CLN6-201ENST00000249806 PDE3BQ13370 1112 aa28.92■■■□□ 2.22
CLN6-201ENST00000249806 NEXMIFQ5QGS0 1516 aa28.92■■■□□ 2.22
CLN6-201ENST00000249806 ZMYM4Q5VZL5 1548 aa28.91■■■□□ 2.22
CLN6-201ENST00000249806 SENP3Q9H4L4 574 aaPredicted RBP28.9■■■□□ 2.22
CLN6-201ENST00000249806 RBM19Q9Y4C8 960 aaKnown RBP28.9■■■□□ 2.22
CLN6-201ENST00000249806 SLC52A1Q9NWF4 448 aa28.9■■■□□ 2.22
CLN6-201ENST00000249806 QRICH2Q9H0J4 1663 aa28.89■■■□□ 2.22
CLN6-201ENST00000249806 WDR43Q15061 677 aaKnown RBP eCLIP28.88■■■□□ 2.21
CLN6-201ENST00000249806 FBXO31Q5XUX0 539 aaPredicted RBP28.87■■■□□ 2.21
CLN6-201ENST00000249806 RCAN3Q9UKA8 241 aa28.86■■■□□ 2.21
CLN6-201ENST00000249806 MYO5BQ9ULV0 1848 aa28.85■■■□□ 2.21
CLN6-201ENST00000249806 PREX1Q8TCU6 1659 aa28.85■■■□□ 2.21
CLN6-201ENST00000249806 SLC12A5Q9H2X9 1139 aa28.85■■■□□ 2.21
CLN6-201ENST00000249806 RRP1P56182 461 aaKnown RBP28.81■■■□□ 2.2
CLN6-201ENST00000249806 TMEM131LA2VDJ0 1609 aa28.78■■■□□ 2.2
CLN6-201ENST00000249806 ARHGEF28Q8N1W1 1705 aaKnown RBP28.77■■■□□ 2.2
CLN6-201ENST00000249806 ZFYVE9O95405 1425 aa28.76■■■□□ 2.2
CLN6-201ENST00000249806 SAFB2Q14151 953 aaKnown RBP eCLIP28.76■■■□□ 2.19
CLN6-201ENST00000249806 NSD3Q9BZ95 1437 aa28.76■■■□□ 2.19
CLN6-201ENST00000249806 CCDC136Q96JN2 1154 aa28.75■■■□□ 2.19
CLN6-201ENST00000249806 STK26Q9P289 416 aa28.75■■■□□ 2.19
CLN6-201ENST00000249806 PLEKHH1Q9ULM0 1364 aa28.75■■■□□ 2.19
CLN6-201ENST00000249806 CCDC146Q8IYE0 955 aa28.73■■■□□ 2.19
CLN6-201ENST00000249806 EVC2Q86UK5 1308 aa28.72■■■□□ 2.19
CLN6-201ENST00000249806 MLECQ14165 292 aa28.71■■■□□ 2.19
CLN6-201ENST00000249806 TULP4Q9NRJ4 1543 aa28.7■■■□□ 2.19
CLN6-201ENST00000249806 CABP2Q9NPB3 220 aa28.7■■■□□ 2.18
CLN6-201ENST00000249806 TNNT2P45379 298 aaPredicted RBP28.69■■■□□ 2.18
CLN6-201ENST00000249806 STAG3Q9UJ98 1225 aa28.69■■■□□ 2.18
CLN6-201ENST00000249806 REREQ9P2R6 1566 aa28.68■■■□□ 2.18
CLN6-201ENST00000249806 MORC1Q86VD1 984 aa28.68■■■□□ 2.18
CLN6-201ENST00000249806 EXOC6Q8TAG9 804 aa28.68■■■□□ 2.18
CLN6-201ENST00000249806 AGLP35573 1532 aa28.67■■■□□ 2.18
CLN6-201ENST00000249806 ZNF521Q96K83 1311 aa28.67■■■□□ 2.18
CLN6-201ENST00000249806 CLTCQ00610 1675 aaKnown RBP28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms