RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 E9PSI1 815 aa21.63■■□□□ 1.05
SGPP1-201ENST00000247225 MFAP1P55081 439 aaKnown RBP21.63■■□□□ 1.05
SGPP1-201ENST00000247225 TMEM132EQ6IEE7 984 aa21.63■■□□□ 1.05
SGPP1-201ENST00000247225 SLC12A5Q9H2X9 1139 aa21.63■■□□□ 1.05
SGPP1-201ENST00000247225 U2SURPO15042 1029 aaKnown RBP21.61■■□□□ 1.05
SGPP1-201ENST00000247225 MAGI2Q86UL8 1455 aa21.61■■□□□ 1.05
SGPP1-201ENST00000247225 PLA2R1Q13018 1463 aa21.6■■□□□ 1.05
SGPP1-201ENST00000247225 CARD14Q9BXL6 1004 aa21.6■■□□□ 1.05
SGPP1-201ENST00000247225 U2AF1L5P0DN76 240 aaPredicted RBP21.6■■□□□ 1.05
SGPP1-201ENST00000247225 U2AF1Q01081 240 aaKnown RBP eCLIP21.6■■□□□ 1.05
SGPP1-201ENST00000247225 FTSJ3Q8IY81 847 aaKnown RBP21.6■■□□□ 1.05
SGPP1-201ENST00000247225 RLBP1P12271 317 aa21.59■■□□□ 1.05
SGPP1-201ENST00000247225 RSPH4AQ5TD94 716 aa21.59■■□□□ 1.05
SGPP1-201ENST00000247225 WWC1Q8IX03 1113 aa21.59■■□□□ 1.05
SGPP1-201ENST00000247225 ARHGAP5Q13017 1502 aa21.59■■□□□ 1.05
SGPP1-201ENST00000247225 COL17A1Q9UMD9 1497 aaPredicted RBP21.59■■□□□ 1.05
SGPP1-201ENST00000247225 TCP11L2Q8N4U5 519 aa21.58■■□□□ 1.05
SGPP1-201ENST00000247225 FOXD4L1Q9NU39 408 aa21.58■■□□□ 1.05
SGPP1-201ENST00000247225 PCDHB15Q9Y5E8 787 aa21.58■■□□□ 1.05
SGPP1-201ENST00000247225 BLMP54132 1417 aaPredicted RBP21.58■■□□□ 1.05
SGPP1-201ENST00000247225 PDZRN3Q9UPQ7 1066 aa21.57■■□□□ 1.04
SGPP1-201ENST00000247225 ARHGEF12Q9NZN5 1544 aa21.57■■□□□ 1.04
SGPP1-201ENST00000247225 CCDC141Q6ZP82 1450 aa21.57■■□□□ 1.04
SGPP1-201ENST00000247225 SPAG9O60271 1321 aaKnown RBP21.57■■□□□ 1.04
SGPP1-201ENST00000247225 TSR2Q969E8 191 aaKnown RBP21.57■■□□□ 1.04
SGPP1-201ENST00000247225 POLR1AO95602 1720 aaPredicted RBP21.56■■□□□ 1.04
SGPP1-201ENST00000247225 EFCAB2Q5VUJ9 269 aa21.56■■□□□ 1.04
SGPP1-201ENST00000247225 MTHFSP49914 203 aa21.54■■□□□ 1.04
SGPP1-201ENST00000247225 ADGRF5Q8IZF2 1346 aa21.53■■□□□ 1.04
SGPP1-201ENST00000247225 STK26Q9P289 416 aa21.53■■□□□ 1.04
SGPP1-201ENST00000247225 CGNL1Q0VF96 1302 aa21.53■■□□□ 1.04
SGPP1-201ENST00000247225 ITSN2Q9NZM3 1697 aa21.52■■□□□ 1.04
SGPP1-201ENST00000247225 GGT6Q6P531 493 aa21.52■■□□□ 1.03
SGPP1-201ENST00000247225 ITPRIPQ8IWB1 547 aa21.52■■□□□ 1.03
SGPP1-201ENST00000247225 ZNF521Q96K83 1311 aa21.52■■□□□ 1.03
SGPP1-201ENST00000247225 SYNJ2O15056 1496 aa21.51■■□□□ 1.03
SGPP1-201ENST00000247225 SYCP2Q9BX26 1530 aa21.51■■□□□ 1.03
SGPP1-201ENST00000247225 CEP170Q5SW79 1584 aa21.51■■□□□ 1.03
SGPP1-201ENST00000247225 ZMYM4Q5VZL5 1548 aa21.51■■□□□ 1.03
SGPP1-201ENST00000247225 KDM5DQ9BY66 1539 aa21.51■■□□□ 1.03
SGPP1-201ENST00000247225 ABCC10Q5T3U5 1492 aa21.5■■□□□ 1.03
SGPP1-201ENST00000247225 ADGBQ8N7X0 1667 aa21.5■■□□□ 1.03
SGPP1-201ENST00000247225 RARSP54136 660 aaKnown RBP21.48■■□□□ 1.03
SGPP1-201ENST00000247225 SMC4Q9NTJ3 1288 aa21.48■■□□□ 1.03
SGPP1-201ENST00000247225 TBC1D2Q9BYX2 928 aa21.48■■□□□ 1.03
SGPP1-201ENST00000247225 USP19O94966 1318 aa21.48■■□□□ 1.03
SGPP1-201ENST00000247225 NKTRP30414 1462 aaKnown RBP21.47■■□□□ 1.03
SGPP1-201ENST00000247225 NAP1L5Q96NT1 182 aaPredicted RBP21.47■■□□□ 1.03
SGPP1-201ENST00000247225 GPRASP1Q5JY77 1395 aa21.47■■□□□ 1.03
SGPP1-201ENST00000247225 HSP90AA1P07900 732 aaKnown RBP21.46■■□□□ 1.03
SGPP1-201ENST00000247225 EIF4G3O43432 1585 aaKnown RBP21.46■■□□□ 1.03
SGPP1-201ENST00000247225 PANK2Q9BZ23 570 aa21.45■■□□□ 1.02
SGPP1-201ENST00000247225 RWDD1Q9H446 243 aaPredicted RBP21.45■■□□□ 1.02
SGPP1-201ENST00000247225 MAPK8IP3Q9UPT6 1336 aa21.45■■□□□ 1.02
SGPP1-201ENST00000247225 ELL2O00472 640 aaPredicted RBP21.45■■□□□ 1.02
SGPP1-201ENST00000247225 PDE3AQ14432 1141 aa21.45■■□□□ 1.02
SGPP1-201ENST00000247225 PMFBP1Q8TBY8 1022 aa21.44■■□□□ 1.02
SGPP1-201ENST00000247225 WDR7Q9Y4E6 1490 aa21.44■■□□□ 1.02
SGPP1-201ENST00000247225 RUNDC1Q96C34 613 aa21.42■■□□□ 1.02
SGPP1-201ENST00000247225 CFAP53Q96M91 514 aa21.42■■□□□ 1.02
SGPP1-201ENST00000247225 CABP2Q9NPB3 220 aa21.42■■□□□ 1.02
SGPP1-201ENST00000247225 CDC42BPAQ5VT25 1732 aa21.41■■□□□ 1.02
SGPP1-201ENST00000247225 LNPKQ9C0E8 428 aa21.4■■□□□ 1.02
SGPP1-201ENST00000247225 GGNBP2Q9H3C7 697 aa21.4■■□□□ 1.02
SGPP1-201ENST00000247225 EXOSC9Q06265 439 aaKnown RBP21.4■■□□□ 1.02
SGPP1-201ENST00000247225 TRMT2AQ8IZ69 625 aaKnown RBP21.4■■□□□ 1.02
SGPP1-201ENST00000247225 SHANK2Q9UPX8 1470 aa21.4■■□□□ 1.02
SGPP1-201ENST00000247225 FBLN1P23142 703 aa21.39■■□□□ 1.02
SGPP1-201ENST00000247225 RRAGDQ9NQL2 400 aaPredicted RBP21.39■■□□□ 1.02
SGPP1-201ENST00000247225 C22orf23Q9BZE7 217 aa21.39■■□□□ 1.01
SGPP1-201ENST00000247225 GOLGA6L3A6NEY3 463 aa21.39■■□□□ 1.01
SGPP1-201ENST00000247225 SRPK2P78362 688 aaKnown RBP21.37■■□□□ 1.01
SGPP1-201ENST00000247225 DZIP1LQ8IYY4 767 aaKnown RBP21.37■■□□□ 1.01
SGPP1-201ENST00000247225 TRPM1Q7Z4N2 1603 aa21.37■■□□□ 1.01
SGPP1-201ENST00000247225 TRAPPC8Q9Y2L5 1435 aa21.37■■□□□ 1.01
SGPP1-201ENST00000247225 EIF3AQ14152 1382 aaKnown RBP21.37■■□□□ 1.01
SGPP1-201ENST00000247225 C1orf115Q9H7X2 142 aa21.37■■□□□ 1.01
SGPP1-201ENST00000247225 ZKSCAN2Q63HK3 967 aa21.36■■□□□ 1.01
SGPP1-201ENST00000247225 SAMD9LQ8IVG5 1584 aa21.35■■□□□ 1.01
SGPP1-201ENST00000247225 NSD3Q9BZ95 1437 aa21.35■■□□□ 1.01
SGPP1-201ENST00000247225 ASXL1Q8IXJ9 1541 aa21.34■■□□□ 1.01
SGPP1-201ENST00000247225 APBB1O00213 710 aa21.34■■□□□ 1.01
SGPP1-201ENST00000247225 HSCBQ8IWL3 235 aa21.33■■□□□ 1.01
SGPP1-201ENST00000247225 TBC1D32Q96NH3 1257 aa21.33■■□□□ 1.01
SGPP1-201ENST00000247225 MYH16Q9H6N6 1097 aa21.33■■□□□ 1.01
SGPP1-201ENST00000247225 CROCC2H7BZ55 1655 aa21.33■■□□□ 1.01
SGPP1-201ENST00000247225 SCAF11Q99590 1463 aaKnown RBP21.33■■□□□ 1
SGPP1-201ENST00000247225 NOB1Q9ULX3 412 aaKnown RBP21.32■■□□□ 1
SGPP1-201ENST00000247225 HSP90AB1P08238 724 aaKnown RBP21.32■■□□□ 1
SGPP1-201ENST00000247225 TRAK2O60296 914 aa21.32■■□□□ 1
SGPP1-201ENST00000247225 XRCC6P12956 609 aaKnown RBP eCLIP21.32■■□□□ 1
SGPP1-201ENST00000247225 KANK1Q14678 1352 aa21.32■■□□□ 1
SGPP1-201ENST00000247225 L1TD1Q5T7N2 865 aaKnown RBP21.32■■□□□ 1
SGPP1-201ENST00000247225 MCM4P33991 863 aa21.31■■□□□ 1
SGPP1-201ENST00000247225 FAM43AQ8N2R8 423 aa21.31■■□□□ 1
SGPP1-201ENST00000247225 MVPQ14764 893 aaKnown RBP21.31■■□□□ 1
SGPP1-201ENST00000247225 SSH1Q8WYL5 1049 aa21.31■■□□□ 1
SGPP1-201ENST00000247225 SCAPERQ9BY12 1400 aa21.3■■□□□ 1
SGPP1-201ENST00000247225 PRDM15P57071 1507 aaPredicted RBP21.3■■□□□ 1
SGPP1-201ENST00000247225 ADCY10Q96PN6 1610 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms