RNA–Protein interactions for RNA: ENST00000222345.10

SIPA1L3-201, Transcript of signal induced proliferation associated 1 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1L3, Length 7,987 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-201ENST00000222345 PCMTD1Q96MG8 357 aaPredicted RBP16.6■□□□□ 0.25
SIPA1L3-201ENST00000222345 UQCRHLA0A096LP55 91 aa16.6■□□□□ 0.25
SIPA1L3-201ENST00000222345 UQCRHP07919 91 aa16.6■□□□□ 0.25
SIPA1L3-201ENST00000222345 BRPF3Q9ULD4 1205 aa16.6■□□□□ 0.25
SIPA1L3-201ENST00000222345 PDE4CQ08493 712 aa16.6■□□□□ 0.25
SIPA1L3-201ENST00000222345 SRPK2P78362 688 aaKnown RBP16.6■□□□□ 0.25
SIPA1L3-201ENST00000222345 ANKRD45Q5TZF3 282 aa16.6■□□□□ 0.25
SIPA1L3-201ENST00000222345 AKAP17AQ02040 695 aaKnown RBP16.59■□□□□ 0.25
SIPA1L3-201ENST00000222345 TRIM29Q14134 588 aa16.59■□□□□ 0.25
SIPA1L3-201ENST00000222345 TSPY26PQ9H489 355 aa16.59■□□□□ 0.25
SIPA1L3-201ENST00000222345 FMN1Q68DA7 1419 aa16.59■□□□□ 0.25
SIPA1L3-201ENST00000222345 BAZ1BQ9UIG0 1483 aaKnown RBP16.59■□□□□ 0.25
SIPA1L3-201ENST00000222345 CALCOCO1Q9P1Z2 691 aa16.59■□□□□ 0.25
SIPA1L3-201ENST00000222345 CCDC73Q6ZRK6 1079 aa16.58■□□□□ 0.25
SIPA1L3-201ENST00000222345 ZKSCAN2Q63HK3 967 aa16.58■□□□□ 0.25
SIPA1L3-201ENST00000222345 GOLGA6L10A6NI86 522 aa16.58■□□□□ 0.24
SIPA1L3-201ENST00000222345 CRBNQ96SW2 442 aa16.58■□□□□ 0.24
SIPA1L3-201ENST00000222345 PDCL3Q9H2J4 239 aa16.58■□□□□ 0.24
SIPA1L3-201ENST00000222345 DDX19BQ9UMR2 479 aa16.58■□□□□ 0.24
SIPA1L3-201ENST00000222345 INTS3Q68E01 1043 aaKnown RBP16.58■□□□□ 0.24
SIPA1L3-201ENST00000222345 IL27Q8NEV9 243 aa16.58■□□□□ 0.24
SIPA1L3-201ENST00000222345 ERLIN1O75477 346 aa16.57■□□□□ 0.24
SIPA1L3-201ENST00000222345 OLFM4Q6UX06 510 aa16.57■□□□□ 0.24
SIPA1L3-201ENST00000222345 C22orf23Q9BZE7 217 aa16.57■□□□□ 0.24
SIPA1L3-201ENST00000222345 RBM10P98175 930 aaKnown RBP16.57■□□□□ 0.24
SIPA1L3-201ENST00000222345 PAK3O75914 559 aaPredicted RBP16.56■□□□□ 0.24
SIPA1L3-201ENST00000222345 GIMAP7Q8NHV1 300 aa16.56■□□□□ 0.24
SIPA1L3-201ENST00000222345 ZNF330Q9Y3S2 320 aaPredicted RBP16.56■□□□□ 0.24
SIPA1L3-201ENST00000222345 CT47B1P0C2W7 299 aaPredicted RBP16.56■□□□□ 0.24
SIPA1L3-201ENST00000222345 FAM107BQ9H098 131 aa16.56■□□□□ 0.24
SIPA1L3-201ENST00000222345 AXDND1Q5T1B0 1012 aaPredicted RBP16.55■□□□□ 0.24
SIPA1L3-201ENST00000222345 EXOC6Q8TAG9 804 aa16.55■□□□□ 0.24
SIPA1L3-201ENST00000222345 SMC3Q9UQE7 1217 aa16.55■□□□□ 0.24
SIPA1L3-201ENST00000222345 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.55■□□□□ 0.24
SIPA1L3-201ENST00000222345 HDGFP51858 240 aaKnown RBP16.54■□□□□ 0.24
SIPA1L3-201ENST00000222345 RILPL2Q969X0 211 aa16.54■□□□□ 0.24
SIPA1L3-201ENST00000222345 CCDC9Q9Y3X0 531 aaKnown RBP16.54■□□□□ 0.24
SIPA1L3-201ENST00000222345 MCM2P49736 904 aa16.54■□□□□ 0.24
SIPA1L3-201ENST00000222345 SYNE3Q6ZMZ3 975 aa16.54■□□□□ 0.24
SIPA1L3-201ENST00000222345 SMARCE1Q969G3 411 aa16.54■□□□□ 0.24
SIPA1L3-201ENST00000222345 EIF4G1Q04637 1599 aaKnown RBP16.54■□□□□ 0.24
SIPA1L3-201ENST00000222345 CCDC112Q8NEF3 446 aa16.54■□□□□ 0.24
SIPA1L3-201ENST00000222345 MARCH6O60337 910 aa16.54■□□□□ 0.24
SIPA1L3-201ENST00000222345 CLUAP1Q96AJ1 413 aa16.53■□□□□ 0.24
SIPA1L3-201ENST00000222345 FOXD4L6Q3SYB3 417 aaPredicted RBP16.53■□□□□ 0.24
SIPA1L3-201ENST00000222345 FOXD4L3Q6VB84 417 aaPredicted RBP16.53■□□□□ 0.24
SIPA1L3-201ENST00000222345 STK26Q9P289 416 aa16.53■□□□□ 0.24
SIPA1L3-201ENST00000222345 BAZ1AQ9NRL2 1556 aaPredicted RBP16.53■□□□□ 0.24
SIPA1L3-201ENST00000222345 NEFHP12036 1026 aa16.53■□□□□ 0.24
SIPA1L3-201ENST00000222345 DDX11Q96FC9 970 aa16.53■□□□□ 0.24
SIPA1L3-201ENST00000222345 ERLIN2O94905 339 aa16.53■□□□□ 0.24
SIPA1L3-201ENST00000222345 TRIM5Q9C035 493 aa16.53■□□□□ 0.24
SIPA1L3-201ENST00000222345 ESPNB1AK53 854 aa16.52■□□□□ 0.24
SIPA1L3-201ENST00000222345 GRPEL1Q9HAV7 217 aa16.52■□□□□ 0.23
SIPA1L3-201ENST00000222345 RABEP1Q15276 862 aa16.51■□□□□ 0.23
SIPA1L3-201ENST00000222345 IQCEQ6IPM2 695 aa16.51■□□□□ 0.23
SIPA1L3-201ENST00000222345 PLCD4Q9BRC7 762 aa16.51■□□□□ 0.23
SIPA1L3-201ENST00000222345 NAP1L1P55209 391 aaKnown RBP16.51■□□□□ 0.23
SIPA1L3-201ENST00000222345 TXLNBQ8N3L3 684 aa16.5■□□□□ 0.23
SIPA1L3-201ENST00000222345 CSB-PGBD3P0DP91 1061 aa16.5■□□□□ 0.23
SIPA1L3-201ENST00000222345 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.5■□□□□ 0.23
SIPA1L3-201ENST00000222345 TMX4Q9H1E5 349 aaPredicted RBP16.48■□□□□ 0.23
SIPA1L3-201ENST00000222345 SLC4A10Q6U841 1118 aa16.48■□□□□ 0.23
SIPA1L3-201ENST00000222345 ANKRD30AQ9BXX3 1397 aa16.48■□□□□ 0.23
SIPA1L3-201ENST00000222345 KIF2AO00139 706 aaPredicted RBP16.48■□□□□ 0.23
SIPA1L3-201ENST00000222345 PDCP20941 246 aa16.47■□□□□ 0.23
SIPA1L3-201ENST00000222345 CWC22Q9HCG8 908 aaKnown RBP16.47■□□□□ 0.23
SIPA1L3-201ENST00000222345 ANO2Q9NQ90 1003 aa16.47■□□□□ 0.23
SIPA1L3-201ENST00000222345 TERF2IPQ9NYB0 399 aa16.47■□□□□ 0.23
SIPA1L3-201ENST00000222345 CPLX1O14810 134 aa16.46■□□□□ 0.23
SIPA1L3-201ENST00000222345 PRKRIP1Q9H875 184 aaPredicted RBP16.46■□□□□ 0.23
SIPA1L3-201ENST00000222345 CHMP3Q9Y3E7 222 aa16.46■□□□□ 0.23
SIPA1L3-201ENST00000222345 ZSCAN30Q86W11 494 aa16.46■□□□□ 0.22
SIPA1L3-201ENST00000222345 MPHOSPH9Q99550 1183 aa16.46■□□□□ 0.22
SIPA1L3-201ENST00000222345 CCDC192P0DO97 292 aa16.45■□□□□ 0.22
SIPA1L3-201ENST00000222345 VPS37CA5D8V6 355 aaPredicted RBP16.45■□□□□ 0.22
SIPA1L3-201ENST00000222345 KINO60870 393 aaKnown RBP16.45■□□□□ 0.22
SIPA1L3-201ENST00000222345 FILIP1LQ4L180 1135 aa16.45■□□□□ 0.22
SIPA1L3-201ENST00000222345 PIP4K2AP48426 406 aaPredicted RBP16.44■□□□□ 0.22
SIPA1L3-201ENST00000222345 CCDC146Q8IYE0 955 aa16.44■□□□□ 0.22
SIPA1L3-201ENST00000222345 LUC7LQ9NQ29 371 aaKnown RBP16.44■□□□□ 0.22
SIPA1L3-201ENST00000222345 PDILTQ8N807 584 aa16.44■□□□□ 0.22
SIPA1L3-201ENST00000222345 GGT6Q6P531 493 aa16.44■□□□□ 0.22
SIPA1L3-201ENST00000222345 SAFBQ15424 915 aaKnown RBP eCLIP16.44■□□□□ 0.22
SIPA1L3-201ENST00000222345 ANKRD18AQ8IVF6 992 aa16.44■□□□□ 0.22
SIPA1L3-201ENST00000222345 ODF2Q5BJF6 829 aa16.43■□□□□ 0.22
SIPA1L3-201ENST00000222345 CT47A1Q5JQC4 288 aaPredicted RBP16.43■□□□□ 0.22
SIPA1L3-201ENST00000222345 GBP3Q9H0R5 595 aa16.43■□□□□ 0.22
SIPA1L3-201ENST00000222345 NINLQ9Y2I6 1382 aa16.43■□□□□ 0.22
SIPA1L3-201ENST00000222345 FRAT2O75474 233 aaPredicted RBP16.42■□□□□ 0.22
SIPA1L3-201ENST00000222345 PLIN1O60240 522 aa16.42■□□□□ 0.22
SIPA1L3-201ENST00000222345 EPS15P42566 896 aa16.42■□□□□ 0.22
SIPA1L3-201ENST00000222345 PKD2Q13563 968 aa16.42■□□□□ 0.22
SIPA1L3-201ENST00000222345 LRRCC1Q9C099 1032 aa16.42■□□□□ 0.22
SIPA1L3-201ENST00000222345 HSP90AB2PQ58FF8 381 aa16.42■□□□□ 0.22
SIPA1L3-201ENST00000222345 RNF214Q8ND24 703 aa16.42■□□□□ 0.22
SIPA1L3-201ENST00000222345 CGNQ9P2M7 1197 aaKnown RBP16.42■□□□□ 0.22
SIPA1L3-201ENST00000222345 SDF4Q9BRK5 362 aa16.42■□□□□ 0.22
SIPA1L3-201ENST00000222345 G3V3G9 751 aa16.41■□□□□ 0.22
SIPA1L3-201ENST00000222345 MCM3P25205 808 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms