RNA–Protein interactions for RNA: ENST00000222330.7

GSK3A-201, Transcript of glycogen synthase kinase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GSK3A, Length 2,188 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3A-201ENST00000222330 IFT172Q9UG01 1749 aa33.67■■■□□ 2.98
GSK3A-201ENST00000222330 CCDC7Q96M83 1385 aa33.65■■■□□ 2.98
GSK3A-201ENST00000222330 NUTM2DQ5VT03 806 aaPredicted RBP33.64■■■□□ 2.98
GSK3A-201ENST00000222330 MYOM2P54296 1465 aa33.64■■■□□ 2.98
GSK3A-201ENST00000222330 KIF7Q2M1P5 1343 aa33.63■■■□□ 2.97
GSK3A-201ENST00000222330 CFAP70Q5T0N1 1121 aa33.61■■■□□ 2.97
GSK3A-201ENST00000222330 PPLO60437 1756 aa33.6■■■□□ 2.97
GSK3A-201ENST00000222330 ADAMTSL3P82987 1691 aa33.6■■■□□ 2.97
GSK3A-201ENST00000222330 RIMS1Q86UR5 1692 aaKnown RBP33.6■■■□□ 2.97
GSK3A-201ENST00000222330 MYO5BQ9ULV0 1848 aa33.59■■■□□ 2.97
GSK3A-201ENST00000222330 RPGRIP1LQ68CZ1 1315 aa33.59■■■□□ 2.97
GSK3A-201ENST00000222330 C3P01024 1663 aa33.58■■■□□ 2.97
GSK3A-201ENST00000222330 LAMC1P11047 1609 aa33.58■■■□□ 2.97
GSK3A-201ENST00000222330 SCAF1Q9H7N4 1312 aaKnown RBP33.57■■■□□ 2.96
GSK3A-201ENST00000222330 POLR3GLQ9BT43 218 aa33.56■■■□□ 2.96
GSK3A-201ENST00000222330 SPATA31D1Q6ZQQ2 1576 aa33.56■■■□□ 2.96
GSK3A-201ENST00000222330 NRXN1Q9ULB1 1477 aa33.55■■■□□ 2.96
GSK3A-201ENST00000222330 TMEM131LA2VDJ0 1609 aa33.55■■■□□ 2.96
GSK3A-201ENST00000222330 POLR1AO95602 1720 aaPredicted RBP33.53■■■□□ 2.96
GSK3A-201ENST00000222330 STAG3Q9UJ98 1225 aa33.52■■■□□ 2.96
GSK3A-201ENST00000222330 NEXMIFQ5QGS0 1516 aa33.51■■■□□ 2.96
GSK3A-201ENST00000222330 SENP3Q9H4L4 574 aaPredicted RBP33.5■■■□□ 2.95
GSK3A-201ENST00000222330 KIAA1210Q9ULL0 1709 aa33.49■■■□□ 2.95
GSK3A-201ENST00000222330 VGFO15240 615 aaPredicted RBP33.48■■■□□ 2.95
GSK3A-201ENST00000222330 PIK3C2GO75747 1445 aa33.47■■■□□ 2.95
GSK3A-201ENST00000222330 TESK2Q96S53 571 aa33.45■■■□□ 2.95
GSK3A-201ENST00000222330 IQGAP1P46940 1657 aa33.44■■■□□ 2.94
GSK3A-201ENST00000222330 C14orf93Q9H972 538 aaKnown RBP33.44■■■□□ 2.94
GSK3A-201ENST00000222330 SCAF11Q99590 1463 aaKnown RBP33.43■■■□□ 2.94
GSK3A-201ENST00000222330 TNRQ92752 1358 aa33.42■■■□□ 2.94
GSK3A-201ENST00000222330 ANP32CO43423 234 aa33.4■■■□□ 2.94
GSK3A-201ENST00000222330 TMEM132EQ6IEE7 984 aa33.4■■■□□ 2.94
GSK3A-201ENST00000222330 A2ML1A8K2U0 1454 aa33.39■■■□□ 2.94
GSK3A-201ENST00000222330 KDM4FA0A1W2PPD8 638 aa33.36■■■□□ 2.93
GSK3A-201ENST00000222330 DISP3Q9P2K9 1392 aa33.35■■■□□ 2.93
GSK3A-201ENST00000222330 ZFYVE9O95405 1425 aa33.35■■■□□ 2.93
GSK3A-201ENST00000222330 PTPRMP28827 1452 aa33.35■■■□□ 2.93
GSK3A-201ENST00000222330 YTHDC1Q96MU7 727 aaKnown RBP33.32■■■□□ 2.92
GSK3A-201ENST00000222330 SETBP1Q9Y6X0 1596 aa33.31■■■□□ 2.92
GSK3A-201ENST00000222330 TRAK1Q9UPV9 953 aa33.3■■■□□ 2.92
GSK3A-201ENST00000222330 ADGRB1O14514 1584 aa33.3■■■□□ 2.92
GSK3A-201ENST00000222330 TMF1P82094 1093 aa33.3■■■□□ 2.92
GSK3A-201ENST00000222330 EIF3AQ14152 1382 aaKnown RBP33.29■■■□□ 2.92
GSK3A-201ENST00000222330 RIMS2Q9UQ26 1411 aa33.28■■■□□ 2.92
GSK3A-201ENST00000222330 MYO3AQ8NEV4 1616 aa33.23■■■□□ 2.91
GSK3A-201ENST00000222330 UBR1Q8IWV7 1749 aa33.22■■■□□ 2.91
GSK3A-201ENST00000222330 CENPBP07199 599 aaPredicted RBP33.21■■■□□ 2.91
GSK3A-201ENST00000222330 NLRP1Q9C000 1473 aa33.21■■■□□ 2.91
GSK3A-201ENST00000222330 CNGB1Q14028 1251 aaPredicted RBP33.19■■■□□ 2.9
GSK3A-201ENST00000222330 STK26Q9P289 416 aa33.18■■■□□ 2.9
GSK3A-201ENST00000222330 CENPJQ9HC77 1338 aaPredicted RBP33.16■■■□□ 2.9
GSK3A-201ENST00000222330 ASXL1Q8IXJ9 1541 aa33.16■■■□□ 2.9
GSK3A-201ENST00000222330 SETD1BQ9UPS6 1966 aaKnown RBP33.16■■■□□ 2.9
GSK3A-201ENST00000222330 ALKQ9UM73 1620 aa33.15■■■□□ 2.9
GSK3A-201ENST00000222330 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.14■■■□□ 2.9
GSK3A-201ENST00000222330 PRKRIP1Q9H875 184 aaPredicted RBP33.14■■■□□ 2.9
GSK3A-201ENST00000222330 CCER2I3L3R5 266 aa33.13■■■□□ 2.89
GSK3A-201ENST00000222330 TMEM2Q9UHN6 1383 aa33.13■■■□□ 2.89
GSK3A-201ENST00000222330 CEP170BQ9Y4F5 1589 aaPredicted RBP33.11■■■□□ 2.89
GSK3A-201ENST00000222330 KDM5AP29375 1690 aaKnown RBP33.11■■■□□ 2.89
GSK3A-201ENST00000222330 HDGFP51858 240 aaKnown RBP33.09■■■□□ 2.89
GSK3A-201ENST00000222330 CDCA8Q53HL2 280 aa33.07■■■□□ 2.89
GSK3A-201ENST00000222330 SAFB2Q14151 953 aaKnown RBP eCLIP33.07■■■□□ 2.88
GSK3A-201ENST00000222330 ARHGEF28Q8N1W1 1705 aaKnown RBP33.06■■■□□ 2.88
GSK3A-201ENST00000222330 LTKP29376 864 aa33.06■■■□□ 2.88
GSK3A-201ENST00000222330 PANK3Q9H999 370 aa33.06■■■□□ 2.88
GSK3A-201ENST00000222330 BCANQ96GW7 911 aa33.06■■■□□ 2.88
GSK3A-201ENST00000222330 QRICH2Q9H0J4 1663 aa33.06■■■□□ 2.88
GSK3A-201ENST00000222330 YTHDC2Q9H6S0 1430 aaKnown RBP33.05■■■□□ 2.88
GSK3A-201ENST00000222330 PELP1Q8IZL8 1130 aaKnown RBP33.05■■■□□ 2.88
GSK3A-201ENST00000222330 SBNO2Q9Y2G9 1366 aa33.04■■■□□ 2.88
GSK3A-201ENST00000222330 NRXN3Q9Y4C0 1643 aa33.03■■■□□ 2.88
GSK3A-201ENST00000222330 SLC24A1O60721 1099 aa33.02■■■□□ 2.88
GSK3A-201ENST00000222330 THEMISQ8N1K5 641 aaPredicted RBP33.02■■■□□ 2.88
GSK3A-201ENST00000222330 ZNF142P52746 1687 aaPredicted RBP33.02■■■□□ 2.88
GSK3A-201ENST00000222330 TXNDC2Q86VQ3 553 aa33.02■■■□□ 2.88
GSK3A-201ENST00000222330 PER1O15534 1290 aaPredicted RBP33■■■□□ 2.87
GSK3A-201ENST00000222330 SETD1AO15047 1707 aaKnown RBP33■■■□□ 2.87
GSK3A-201ENST00000222330 CCDC184Q52MB2 194 aa33■■■□□ 2.87
GSK3A-201ENST00000222330 PRAM1Q96QH2 718 aa32.98■■■□□ 2.87
GSK3A-201ENST00000222330 METP08581 1390 aa32.97■■■□□ 2.87
GSK3A-201ENST00000222330 POGKQ9P215 609 aa32.95■■■□□ 2.87
GSK3A-201ENST00000222330 EID1Q9Y6B2 187 aa32.95■■■□□ 2.87
GSK3A-201ENST00000222330 SLIT1O75093 1534 aa32.94■■■□□ 2.86
GSK3A-201ENST00000222330 ARHGAP23Q9P227 1491 aa32.94■■■□□ 2.86
GSK3A-201ENST00000222330 MYOM1P52179 1685 aa32.93■■■□□ 2.86
GSK3A-201ENST00000222330 LRPPRCP42704 1394 aaKnown RBP32.91■■■□□ 2.86
GSK3A-201ENST00000222330 WAPLQ7Z5K2 1190 aa32.9■■■□□ 2.86
GSK3A-201ENST00000222330 MINK1Q8N4C8 1332 aaPredicted RBP32.9■■■□□ 2.86
GSK3A-201ENST00000222330 PLEKHG1Q9ULL1 1385 aa32.9■■■□□ 2.86
GSK3A-201ENST00000222330 ADAMTS13Q76LX8 1427 aa32.89■■■□□ 2.86
GSK3A-201ENST00000222330 SLC26A8Q96RN1 970 aa32.89■■■□□ 2.86
GSK3A-201ENST00000222330 GTF3C3Q9Y5Q9 886 aa32.89■■■□□ 2.86
GSK3A-201ENST00000222330 EVC2Q86UK5 1308 aa32.88■■■□□ 2.85
GSK3A-201ENST00000222330 HSPA2P54652 639 aa32.87■■■□□ 2.85
GSK3A-201ENST00000222330 TULP4Q9NRJ4 1543 aa32.87■■■□□ 2.85
GSK3A-201ENST00000222330 CC2D1BQ5T0F9 858 aaKnown RBP32.86■■■□□ 2.85
GSK3A-201ENST00000222330 ABCC11Q96J66 1382 aa32.85■■■□□ 2.85
GSK3A-201ENST00000222330 MRS2Q9HD23 443 aa32.85■■■□□ 2.85
GSK3A-201ENST00000222330 CABP2Q9NPB3 220 aa32.85■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms