RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 RGS3P49796 1198 aa24.18■■□□□ 1.46
CACTIN-201ENST00000221899 CHD1O14646 1710 aa24.18■■□□□ 1.46
CACTIN-201ENST00000221899 CDCA8Q53HL2 280 aa24.17■■□□□ 1.46
CACTIN-201ENST00000221899 SPINK5Q9NQ38 1064 aaPredicted RBP24.17■■□□□ 1.46
CACTIN-201ENST00000221899 USP35Q9P2H5 1018 aa24.17■■□□□ 1.46
CACTIN-201ENST00000221899 IQGAP1P46940 1657 aa24.17■■□□□ 1.46
CACTIN-201ENST00000221899 SLFN5Q08AF3 891 aa24.16■■□□□ 1.46
CACTIN-201ENST00000221899 ABCC2Q92887 1545 aa24.16■■□□□ 1.46
CACTIN-201ENST00000221899 AFAP1Q8N556 730 aa24.16■■□□□ 1.46
CACTIN-201ENST00000221899 IL27Q8NEV9 243 aa24.16■■□□□ 1.46
CACTIN-201ENST00000221899 PLCH2O75038 1416 aa24.16■■□□□ 1.46
CACTIN-201ENST00000221899 SCAF11Q99590 1463 aaKnown RBP24.16■■□□□ 1.46
CACTIN-201ENST00000221899 ASXL1Q8IXJ9 1541 aa24.15■■□□□ 1.46
CACTIN-201ENST00000221899 APAF1O14727 1248 aa24.15■■□□□ 1.46
CACTIN-201ENST00000221899 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.15■■□□□ 1.46
CACTIN-201ENST00000221899 SYNMO15061 1565 aa24.14■■□□□ 1.45
CACTIN-201ENST00000221899 SPAG9O60271 1321 aaKnown RBP24.13■■□□□ 1.45
CACTIN-201ENST00000221899 C8orf34Q49A92 452 aa24.13■■□□□ 1.45
CACTIN-201ENST00000221899 BCAR3O75815 825 aa24.12■■□□□ 1.45
CACTIN-201ENST00000221899 FAM161AQ3B820 660 aa24.12■■□□□ 1.45
CACTIN-201ENST00000221899 DAXXQ9UER7 740 aaPredicted RBP24.11■■□□□ 1.45
CACTIN-201ENST00000221899 RTN4Q9NQC3 1192 aaKnown RBP24.1■■□□□ 1.45
CACTIN-201ENST00000221899 PIK3C2GO75747 1445 aa24.1■■□□□ 1.45
CACTIN-201ENST00000221899 ABCC1P33527 1531 aa24.1■■□□□ 1.45
CACTIN-201ENST00000221899 CLTCL1P53675 1640 aa24.09■■□□□ 1.45
CACTIN-201ENST00000221899 SPHKAPQ2M3C7 1700 aa24.09■■□□□ 1.45
CACTIN-201ENST00000221899 TRPM2O94759 1503 aa24.09■■□□□ 1.45
CACTIN-201ENST00000221899 DMRT2Q9Y5R5 561 aa24.08■■□□□ 1.45
CACTIN-201ENST00000221899 MYOM1P52179 1685 aa24.08■■□□□ 1.45
CACTIN-201ENST00000221899 CFAP70Q5T0N1 1121 aa24.07■■□□□ 1.44
CACTIN-201ENST00000221899 SHROOM2Q13796 1616 aa24.07■■□□□ 1.44
CACTIN-201ENST00000221899 NFKBIBQ15653 356 aa24.07■■□□□ 1.44
CACTIN-201ENST00000221899 SCAPERQ9BY12 1400 aa24.06■■□□□ 1.44
CACTIN-201ENST00000221899 TRMT2AQ8IZ69 625 aaKnown RBP24.06■■□□□ 1.44
CACTIN-201ENST00000221899 EIF3AQ14152 1382 aaKnown RBP24.05■■□□□ 1.44
CACTIN-201ENST00000221899 CEP152O94986 1710 aa24.05■■□□□ 1.44
CACTIN-201ENST00000221899 NKTRP30414 1462 aaKnown RBP24.04■■□□□ 1.44
CACTIN-201ENST00000221899 CLASP1Q7Z460 1538 aa24.04■■□□□ 1.44
CACTIN-201ENST00000221899 ZCCHC11Q5TAX3 1644 aaKnown RBP24.03■■□□□ 1.44
CACTIN-201ENST00000221899 PTPRTO14522 1441 aa24.03■■□□□ 1.44
CACTIN-201ENST00000221899 CARD14Q9BXL6 1004 aa24.03■■□□□ 1.44
CACTIN-201ENST00000221899 NPC1L1Q9UHC9 1359 aa24.01■■□□□ 1.43
CACTIN-201ENST00000221899 KIF3BO15066 747 aa24.01■■□□□ 1.43
CACTIN-201ENST00000221899 KDM5AP29375 1690 aaKnown RBP24■■□□□ 1.43
CACTIN-201ENST00000221899 E9PSI1 815 aa24■■□□□ 1.43
CACTIN-201ENST00000221899 ADGRF5Q8IZF2 1346 aa24■■□□□ 1.43
CACTIN-201ENST00000221899 IGHDP01880 384 aa24■■□□□ 1.43
CACTIN-201ENST00000221899 ZFYVE16Q7Z3T8 1539 aa23.99■■□□□ 1.43
CACTIN-201ENST00000221899 UGGT1Q9NYU2 1555 aa23.98■■□□□ 1.43
CACTIN-201ENST00000221899 STAC3Q96MF2 364 aa23.98■■□□□ 1.43
CACTIN-201ENST00000221899 ERVK-7P63135 1459 aa23.97■■□□□ 1.43
CACTIN-201ENST00000221899 TNNT2P45379 298 aaPredicted RBP23.97■■□□□ 1.43
CACTIN-201ENST00000221899 GSE1Q14687 1217 aa23.97■■□□□ 1.43
CACTIN-201ENST00000221899 NEUROD2Q15784 382 aa23.97■■□□□ 1.43
CACTIN-201ENST00000221899 CANXP27824 592 aaKnown RBP23.97■■□□□ 1.43
CACTIN-201ENST00000221899 KANK1Q14678 1352 aa23.96■■□□□ 1.43
CACTIN-201ENST00000221899 PANK1Q8TE04 598 aa23.96■■□□□ 1.43
CACTIN-201ENST00000221899 COG6Q9Y2V7 657 aa23.95■■□□□ 1.42
CACTIN-201ENST00000221899 RTEL1-TNFRSF6BF6WH68 1400 aa23.94■■□□□ 1.42
CACTIN-201ENST00000221899 RRP7AQ9Y3A4 280 aaKnown RBP23.94■■□□□ 1.42
CACTIN-201ENST00000221899 TET3O43151 1660 aa23.93■■□□□ 1.42
CACTIN-201ENST00000221899 FRAT1Q92837 279 aaPredicted RBP23.93■■□□□ 1.42
CACTIN-201ENST00000221899 CENPJQ9HC77 1338 aaPredicted RBP23.93■■□□□ 1.42
CACTIN-201ENST00000221899 BRPF3Q9ULD4 1205 aa23.92■■□□□ 1.42
CACTIN-201ENST00000221899 WWC1Q8IX03 1113 aa23.91■■□□□ 1.42
CACTIN-201ENST00000221899 FRAT2O75474 233 aaPredicted RBP23.91■■□□□ 1.42
CACTIN-201ENST00000221899 ABCA6Q8N139 1617 aa23.9■■□□□ 1.42
CACTIN-201ENST00000221899 DEPDC5O75140 1603 aa23.9■■□□□ 1.42
CACTIN-201ENST00000221899 CHGAP10645 457 aaKnown RBP23.89■■□□□ 1.41
CACTIN-201ENST00000221899 CGNL1Q0VF96 1302 aa23.88■■□□□ 1.41
CACTIN-201ENST00000221899 CLUAP1Q96AJ1 413 aa23.88■■□□□ 1.41
CACTIN-201ENST00000221899 MAP3K4Q9Y6R4 1608 aa23.88■■□□□ 1.41
CACTIN-201ENST00000221899 ATP7AQ04656 1500 aa23.87■■□□□ 1.41
CACTIN-201ENST00000221899 SEC24BO95487 1268 aa23.87■■□□□ 1.41
CACTIN-201ENST00000221899 KIAA1210Q9ULL0 1709 aa23.87■■□□□ 1.41
CACTIN-201ENST00000221899 PDE3AQ14432 1141 aa23.86■■□□□ 1.41
CACTIN-201ENST00000221899 MORC1Q86VD1 984 aa23.86■■□□□ 1.41
CACTIN-201ENST00000221899 ANO8Q9HCE9 1232 aaPredicted RBP23.86■■□□□ 1.41
CACTIN-201ENST00000221899 TRAK1Q9UPV9 953 aa23.86■■□□□ 1.41
CACTIN-201ENST00000221899 BCL2L13Q9BXK5 485 aa23.85■■□□□ 1.41
CACTIN-201ENST00000221899 TNNQ9UQP3 1299 aa23.85■■□□□ 1.41
CACTIN-201ENST00000221899 SLC12A5Q9H2X9 1139 aa23.84■■□□□ 1.41
CACTIN-201ENST00000221899 NSD3Q9BZ95 1437 aa23.84■■□□□ 1.41
CACTIN-201ENST00000221899 USP19O94966 1318 aa23.83■■□□□ 1.41
CACTIN-201ENST00000221899 UHRF1BP1LA0JNW5 1464 aa23.83■■□□□ 1.41
CACTIN-201ENST00000221899 FANCAO15360 1455 aa23.83■■□□□ 1.41
CACTIN-201ENST00000221899 POLR3AO14802 1390 aaPredicted RBP23.83■■□□□ 1.41
CACTIN-201ENST00000221899 VWDEQ8N2E2 1590 aa23.83■■□□□ 1.4
CACTIN-201ENST00000221899 MYOM2P54296 1465 aa23.83■■□□□ 1.4
CACTIN-201ENST00000221899 SLC24A1O60721 1099 aa23.82■■□□□ 1.4
CACTIN-201ENST00000221899 TCP11L2Q8N4U5 519 aa23.81■■□□□ 1.4
CACTIN-201ENST00000221899 NGEFQ8N5V2 710 aa23.81■■□□□ 1.4
CACTIN-201ENST00000221899 INO80Q9ULG1 1556 aaPredicted RBP23.8■■□□□ 1.4
CACTIN-201ENST00000221899 NOS1P29475 1434 aa23.8■■□□□ 1.4
CACTIN-201ENST00000221899 MROH2AA6NES4 1674 aa23.79■■□□□ 1.4
CACTIN-201ENST00000221899 RARSP54136 660 aaKnown RBP23.79■■□□□ 1.4
CACTIN-201ENST00000221899 RLBP1P12271 317 aa23.79■■□□□ 1.4
CACTIN-201ENST00000221899 RUNDC1Q96C34 613 aa23.79■■□□□ 1.4
CACTIN-201ENST00000221899 KIF1BO60333 1816 aa23.78■■□□□ 1.4
CACTIN-201ENST00000221899 TMEM132EQ6IEE7 984 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms