RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 ADGRB3O60242 1522 aa18.11■□□□□ 0.49
SNU13-201ENST00000215956 PROSER2Q86WR7 435 aaPredicted RBP18.1■□□□□ 0.49
SNU13-201ENST00000215956 RBM33Q96EV2 1170 aaKnown RBP18.1■□□□□ 0.49
SNU13-201ENST00000215956 SLC26A8Q96RN1 970 aa18.1■□□□□ 0.49
SNU13-201ENST00000215956 IDI1Q13907 227 aa18.09■□□□□ 0.49
SNU13-201ENST00000215956 MSH6P52701 1360 aa18.07■□□□□ 0.48
SNU13-201ENST00000215956 DAPK1P53355 1430 aa18.07■□□□□ 0.48
SNU13-201ENST00000215956 NOS1P29475 1434 aa18.06■□□□□ 0.48
SNU13-201ENST00000215956 CHD2O14647 1828 aaKnown RBP18.05■□□□□ 0.48
SNU13-201ENST00000215956 MYO5BQ9ULV0 1848 aa18.05■□□□□ 0.48
SNU13-201ENST00000215956 JCADQ9P266 1359 aa18.04■□□□□ 0.48
SNU13-201ENST00000215956 COL16A1Q07092 1604 aaPredicted RBP18.03■□□□□ 0.48
SNU13-201ENST00000215956 ITGAEP38570 1179 aa18.02■□□□□ 0.48
SNU13-201ENST00000215956 SLAIN2Q9P270 581 aa18.02■□□□□ 0.48
SNU13-201ENST00000215956 CLSPNQ9HAW4 1339 aa18.02■□□□□ 0.48
SNU13-201ENST00000215956 BCANQ96GW7 911 aa18.01■□□□□ 0.47
SNU13-201ENST00000215956 ANKRD30AQ9BXX3 1397 aa18.01■□□□□ 0.47
SNU13-201ENST00000215956 GCC2Q8IWJ2 1684 aa18.01■□□□□ 0.47
SNU13-201ENST00000215956 SLC52A1Q9NWF4 448 aa18■□□□□ 0.47
SNU13-201ENST00000215956 SETD5Q9C0A6 1442 aa17.99■□□□□ 0.47
SNU13-201ENST00000215956 ZFYVE9O95405 1425 aa17.99■□□□□ 0.47
SNU13-201ENST00000215956 PLEKHG1Q9ULL1 1385 aa17.98■□□□□ 0.47
SNU13-201ENST00000215956 LRP6O75581 1613 aa17.98■□□□□ 0.47
SNU13-201ENST00000215956 CHIC2Q9UKJ5 165 aa17.98■□□□□ 0.47
SNU13-201ENST00000215956 RPRD2Q5VT52 1461 aaKnown RBP17.97■□□□□ 0.47
SNU13-201ENST00000215956 ACIN1Q9UKV3 1341 aaKnown RBP17.96■□□□□ 0.47
SNU13-201ENST00000215956 SHPRHQ149N8 1683 aa17.95■□□□□ 0.46
SNU13-201ENST00000215956 TMEM131LA2VDJ0 1609 aa17.95■□□□□ 0.46
SNU13-201ENST00000215956 RIMS2Q9UQ26 1411 aa17.95■□□□□ 0.46
SNU13-201ENST00000215956 SPATA31A6Q5VVP1 1343 aa17.95■□□□□ 0.46
SNU13-201ENST00000215956 AHDC1Q5TGY3 1603 aaPredicted RBP17.95■□□□□ 0.46
SNU13-201ENST00000215956 NCOA3Q9Y6Q9 1424 aa17.94■□□□□ 0.46
SNU13-201ENST00000215956 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.94■□□□□ 0.46
SNU13-201ENST00000215956 ADGRL2O95490 1459 aa17.94■□□□□ 0.46
SNU13-201ENST00000215956 PPP1R15AO75807 674 aaPredicted RBP17.94■□□□□ 0.46
SNU13-201ENST00000215956 MEX3CQ5U5Q3 659 aaKnown RBP17.92■□□□□ 0.46
SNU13-201ENST00000215956 RAB3GAP2Q9H2M9 1393 aa17.92■□□□□ 0.46
SNU13-201ENST00000215956 HDGFP51858 240 aaKnown RBP17.91■□□□□ 0.46
SNU13-201ENST00000215956 ZNF772Q68DY9 489 aaPredicted RBP17.91■□□□□ 0.46
SNU13-201ENST00000215956 DIP2AQ14689 1571 aa17.91■□□□□ 0.46
SNU13-201ENST00000215956 C14orf37Q86TY3 774 aa17.9■□□□□ 0.46
SNU13-201ENST00000215956 UPF1Q92900 1129 aaKnown RBP eCLIP17.9■□□□□ 0.462e-7■■■■■ 28.2
SNU13-201ENST00000215956 HFM1A2PYH4 1435 aa17.9■□□□□ 0.46
SNU13-201ENST00000215956 TRIM52Q96A61 297 aa17.9■□□□□ 0.46
SNU13-201ENST00000215956 TBX22Q9Y458 520 aa17.9■□□□□ 0.46
SNU13-201ENST00000215956 DHX57Q6P158 1386 aaKnown RBP17.89■□□□□ 0.45
SNU13-201ENST00000215956 ADAMTS13Q76LX8 1427 aa17.89■□□□□ 0.45
SNU13-201ENST00000215956 ANKRD50Q9ULJ7 1429 aa17.89■□□□□ 0.45
SNU13-201ENST00000215956 CADPS2Q86UW7 1296 aa17.88■□□□□ 0.45
SNU13-201ENST00000215956 ATF3P18847 181 aa17.86■□□□□ 0.45
SNU13-201ENST00000215956 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.86■□□□□ 0.45
SNU13-201ENST00000215956 C19orf44Q9H6X5 657 aa17.86■□□□□ 0.45
SNU13-201ENST00000215956 UNC13BO14795 1591 aa17.85■□□□□ 0.45
SNU13-201ENST00000215956 ROCK1Q13464 1354 aa17.85■□□□□ 0.45
SNU13-201ENST00000215956 PIK3R4Q99570 1358 aa17.85■□□□□ 0.45
SNU13-201ENST00000215956 E9PCH4 1651 aa17.85■□□□□ 0.45
SNU13-201ENST00000215956 TRPM2O94759 1503 aa17.84■□□□□ 0.45
SNU13-201ENST00000215956 CHGAP10645 457 aaKnown RBP17.83■□□□□ 0.45
SNU13-201ENST00000215956 RXRBP28702 533 aa17.83■□□□□ 0.45
SNU13-201ENST00000215956 CDK12Q9NYV4 1490 aaPredicted RBP17.83■□□□□ 0.44
SNU13-201ENST00000215956 NUTM2DQ5VT03 806 aaPredicted RBP17.83■□□□□ 0.44
SNU13-201ENST00000215956 BRINP3Q76B58 766 aa17.82■□□□□ 0.44
SNU13-201ENST00000215956 NAIPQ13075 1403 aa17.81■□□□□ 0.44
SNU13-201ENST00000215956 ASXL1Q8IXJ9 1541 aa17.81■□□□□ 0.44
SNU13-201ENST00000215956 NHSL1Q5SYE7 1610 aa17.8■□□□□ 0.44
SNU13-201ENST00000215956 DCCP43146 1447 aa17.8■□□□□ 0.44
SNU13-201ENST00000215956 SRCAPQ6ZRS2 3230 aa17.8■□□□□ 0.44
SNU13-201ENST00000215956 PTPRUQ92729 1446 aa17.8■□□□□ 0.44
SNU13-201ENST00000215956 NUTM2BA6NNL0 878 aaPredicted RBP17.8■□□□□ 0.44
SNU13-201ENST00000215956 NUTM2EB1AL46 878 aaPredicted RBP17.8■□□□□ 0.44
SNU13-201ENST00000215956 NUTM2AQ8IVF1 878 aaPredicted RBP17.8■□□□□ 0.44
SNU13-201ENST00000215956 XRN1Q8IZH2 1706 aaKnown RBP17.79■□□□□ 0.44
SNU13-201ENST00000215956 IQGAP3Q86VI3 1631 aa17.79■□□□□ 0.44
SNU13-201ENST00000215956 AMOTL2Q9Y2J4 779 aa17.78■□□□□ 0.44
SNU13-201ENST00000215956 AFF2P51816 1311 aa17.77■□□□□ 0.44
SNU13-201ENST00000215956 NRXN3Q9Y4C0 1643 aa17.77■□□□□ 0.43
SNU13-201ENST00000215956 MST1RQ04912 1400 aa17.75■□□□□ 0.43
SNU13-201ENST00000215956 RGS12O14924 1447 aa17.74■□□□□ 0.43
SNU13-201ENST00000215956 SETBP1Q9Y6X0 1596 aa17.74■□□□□ 0.43
SNU13-201ENST00000215956 NALCNQ8IZF0 1738 aa17.71■□□□□ 0.42
SNU13-201ENST00000215956 LRRC59Q96AG4 307 aaKnown RBP17.7■□□□□ 0.42
SNU13-201ENST00000215956 C8orf37Q96NL8 207 aa17.7■□□□□ 0.42
SNU13-201ENST00000215956 SPHKAPQ2M3C7 1700 aa17.7■□□□□ 0.42
SNU13-201ENST00000215956 PNPLA6Q8IY17 1366 aa17.69■□□□□ 0.42
SNU13-201ENST00000215956 RBM6P78332 1123 aaKnown RBP17.69■□□□□ 0.42
SNU13-201ENST00000215956 TIMELESSQ9UNS1 1208 aa17.69■□□□□ 0.42
SNU13-201ENST00000215956 ADGRL3Q9HAR2 1447 aa17.68■□□□□ 0.42
SNU13-201ENST00000215956 QTRT2Q9H974 415 aaKnown RBP17.68■□□□□ 0.42
SNU13-201ENST00000215956 NUP155O75694 1391 aa17.67■□□□□ 0.42
SNU13-201ENST00000215956 METP08581 1390 aa17.67■□□□□ 0.42
SNU13-201ENST00000215956 DDX17Q92841 729 aaKnown RBP17.66■□□□□ 0.42
SNU13-201ENST00000215956 EP400Q96L91 3159 aa17.64■□□□□ 0.42
SNU13-201ENST00000215956 LAMC1P11047 1609 aa17.64■□□□□ 0.42
SNU13-201ENST00000215956 ZNF326Q5BKZ1 582 aaKnown RBP17.62■□□□□ 0.41
SNU13-201ENST00000215956 ADAMTS2O95450 1211 aa17.61■□□□□ 0.41
SNU13-201ENST00000215956 NGLY1Q96IV0 654 aa17.61■□□□□ 0.41
SNU13-201ENST00000215956 ATAD2Q6PL18 1390 aa17.61■□□□□ 0.41
SNU13-201ENST00000215956 C1orf167Q5SNV9 1468 aa17.61■□□□□ 0.41
SNU13-201ENST00000215956 NEXMIFQ5QGS0 1516 aa17.61■□□□□ 0.41
SNU13-201ENST00000215956 CLTCL1P53675 1640 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms