RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 NRXN1Q9ULB1 1477 aa22.56■■□□□ 1.2
SNRPD3-201ENST00000215829 EIF4G2P78344 907 aaKnown RBP eCLIP22.56■■□□□ 1.2
SNRPD3-201ENST00000215829 PLPPR3Q6T4P5 718 aa22.56■■□□□ 1.2
SNRPD3-201ENST00000215829 VGFO15240 615 aaPredicted RBP22.55■■□□□ 1.2
SNRPD3-201ENST00000215829 ROCK2O75116 1388 aaKnown RBP22.55■■□□□ 1.2
SNRPD3-201ENST00000215829 CARD11Q9BXL7 1154 aa22.54■■□□□ 1.2
SNRPD3-201ENST00000215829 KDM5AP29375 1690 aaKnown RBP22.54■■□□□ 1.2
SNRPD3-201ENST00000215829 NBPF1Q3BBV0 1214 aa22.53■■□□□ 1.2
SNRPD3-201ENST00000215829 ZFYVE9O95405 1425 aa22.53■■□□□ 1.2
SNRPD3-201ENST00000215829 GPRASP1Q5JY77 1395 aa22.53■■□□□ 1.2
SNRPD3-201ENST00000215829 HSPA5P11021 654 aaKnown RBP22.53■■□□□ 1.2
SNRPD3-201ENST00000215829 HIRIP3Q9BW71 556 aaPredicted RBP22.51■■□□□ 1.19
SNRPD3-201ENST00000215829 KIAA1210Q9ULL0 1709 aa22.51■■□□□ 1.19
SNRPD3-201ENST00000215829 NUTM2DQ5VT03 806 aaPredicted RBP22.5■■□□□ 1.19
SNRPD3-201ENST00000215829 UBR1Q8IWV7 1749 aa22.5■■□□□ 1.19
SNRPD3-201ENST00000215829 PIK3C2GO75747 1445 aa22.49■■□□□ 1.19
SNRPD3-201ENST00000215829 LAMC1P11047 1609 aa22.49■■□□□ 1.19
SNRPD3-201ENST00000215829 USP47Q96K76 1375 aa22.49■■□□□ 1.19
SNRPD3-201ENST00000215829 CFAP70Q5T0N1 1121 aa22.48■■□□□ 1.19
SNRPD3-201ENST00000215829 RIMS2Q9UQ26 1411 aa22.47■■□□□ 1.19
SNRPD3-201ENST00000215829 PTPRMP28827 1452 aa22.46■■□□□ 1.19
SNRPD3-201ENST00000215829 C14orf93Q9H972 538 aaKnown RBP22.46■■□□□ 1.19
SNRPD3-201ENST00000215829 MYO3AQ8NEV4 1616 aa22.45■■□□□ 1.19
SNRPD3-201ENST00000215829 HDGFP51858 240 aaKnown RBP22.45■■□□□ 1.18
SNRPD3-201ENST00000215829 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.45■■□□□ 1.18
SNRPD3-201ENST00000215829 TMEM2Q9UHN6 1383 aa22.44■■□□□ 1.18
SNRPD3-201ENST00000215829 SETD1BQ9UPS6 1966 aaKnown RBP22.44■■□□□ 1.18
SNRPD3-201ENST00000215829 SETBP1Q9Y6X0 1596 aa22.4■■□□□ 1.18
SNRPD3-201ENST00000215829 THEMISQ8N1K5 641 aaPredicted RBP22.4■■□□□ 1.18
SNRPD3-201ENST00000215829 CEP170BQ9Y4F5 1589 aaPredicted RBP22.39■■□□□ 1.17
SNRPD3-201ENST00000215829 ST20-MTHFSA0A0A6YYL1 179 aa22.38■■□□□ 1.17
SNRPD3-201ENST00000215829 SCAF11Q99590 1463 aaKnown RBP22.38■■□□□ 1.17
SNRPD3-201ENST00000215829 SLIT1O75093 1534 aa22.37■■□□□ 1.17
SNRPD3-201ENST00000215829 IQGAP1P46940 1657 aa22.37■■□□□ 1.17
SNRPD3-201ENST00000215829 ARHGAP23Q9P227 1491 aa22.36■■□□□ 1.17
SNRPD3-201ENST00000215829 ADGRB1O14514 1584 aa22.36■■□□□ 1.17
SNRPD3-201ENST00000215829 ZNF142P52746 1687 aaPredicted RBP22.35■■□□□ 1.17
SNRPD3-201ENST00000215829 KDM4FA0A1W2PPD8 638 aa22.34■■□□□ 1.17
SNRPD3-201ENST00000215829 EID1Q9Y6B2 187 aa22.34■■□□□ 1.17
SNRPD3-201ENST00000215829 LTKP29376 864 aa22.33■■□□□ 1.17
SNRPD3-201ENST00000215829 DIEXFQ68CQ4 756 aaKnown RBP22.33■■□□□ 1.17
SNRPD3-201ENST00000215829 TMEM132EQ6IEE7 984 aa22.33■■□□□ 1.17
SNRPD3-201ENST00000215829 TXNDC2Q86VQ3 553 aa22.33■■□□□ 1.17
SNRPD3-201ENST00000215829 ALKQ9UM73 1620 aa22.33■■□□□ 1.17
SNRPD3-201ENST00000215829 SENP3Q9H4L4 574 aaPredicted RBP22.32■■□□□ 1.16
SNRPD3-201ENST00000215829 C11orf95C9JLR9 678 aaPredicted RBP22.31■■□□□ 1.16
SNRPD3-201ENST00000215829 EIF3AQ14152 1382 aaKnown RBP22.31■■□□□ 1.16
SNRPD3-201ENST00000215829 WASHC2AQ641Q2 1341 aa22.3■■□□□ 1.16
SNRPD3-201ENST00000215829 PLEKHG1Q9ULL1 1385 aa22.29■■□□□ 1.16
SNRPD3-201ENST00000215829 NRXN3Q9Y4C0 1643 aa22.29■■□□□ 1.16
SNRPD3-201ENST00000215829 TESK2Q96S53 571 aa22.27■■□□□ 1.16
SNRPD3-201ENST00000215829 ASXL1Q8IXJ9 1541 aa22.27■■□□□ 1.16
SNRPD3-201ENST00000215829 POLR1AO95602 1720 aaPredicted RBP22.27■■□□□ 1.16
SNRPD3-201ENST00000215829 CCDC7Q96M83 1385 aa22.27■■□□□ 1.16
SNRPD3-201ENST00000215829 SETD1AO15047 1707 aaKnown RBP22.26■■□□□ 1.15
SNRPD3-201ENST00000215829 TRAK1Q9UPV9 953 aa22.26■■□□□ 1.15
SNRPD3-201ENST00000215829 BCANQ96GW7 911 aa22.25■■□□□ 1.15
SNRPD3-201ENST00000215829 KIF7Q2M1P5 1343 aa22.25■■□□□ 1.15
SNRPD3-201ENST00000215829 DDX10Q13206 875 aaKnown RBP22.25■■□□□ 1.15
SNRPD3-201ENST00000215829 YTHDC2Q9H6S0 1430 aaKnown RBP22.23■■□□□ 1.15
SNRPD3-201ENST00000215829 ADAMTS13Q76LX8 1427 aa22.22■■□□□ 1.15
SNRPD3-201ENST00000215829 ANKLE2Q86XL3 938 aa22.22■■□□□ 1.15
SNRPD3-201ENST00000215829 SLC24A1O60721 1099 aa22.21■■□□□ 1.15
SNRPD3-201ENST00000215829 TMF1P82094 1093 aa22.2■■□□□ 1.14
SNRPD3-201ENST00000215829 STK26Q9P289 416 aa22.2■■□□□ 1.14
SNRPD3-201ENST00000215829 CENPJQ9HC77 1338 aaPredicted RBP22.2■■□□□ 1.14
SNRPD3-201ENST00000215829 METP08581 1390 aa22.2■■□□□ 1.14
SNRPD3-201ENST00000215829 MED14O60244 1454 aa22.2■■□□□ 1.14
SNRPD3-201ENST00000215829 LRPPRCP42704 1394 aaKnown RBP22.19■■□□□ 1.14
SNRPD3-201ENST00000215829 ARHGEF28Q8N1W1 1705 aaKnown RBP22.19■■□□□ 1.14
SNRPD3-201ENST00000215829 TBX22Q9Y458 520 aa22.18■■□□□ 1.14
SNRPD3-201ENST00000215829 SBNO2Q9Y2G9 1366 aa22.17■■□□□ 1.14
SNRPD3-201ENST00000215829 ABCC11Q96J66 1382 aa22.17■■□□□ 1.14
SNRPD3-201ENST00000215829 DISP3Q9P2K9 1392 aa22.17■■□□□ 1.14
SNRPD3-201ENST00000215829 SLC26A8Q96RN1 970 aa22.16■■□□□ 1.14
SNRPD3-201ENST00000215829 DIP2AQ14689 1571 aa22.14■■□□□ 1.14
SNRPD3-201ENST00000215829 DLC1Q96QB1 1528 aa22.14■■□□□ 1.14
SNRPD3-201ENST00000215829 QRICH2Q9H0J4 1663 aa22.14■■□□□ 1.13
SNRPD3-201ENST00000215829 POLR3GLQ9BT43 218 aa22.14■■□□□ 1.13
SNRPD3-201ENST00000215829 CDCA8Q53HL2 280 aa22.12■■□□□ 1.13
SNRPD3-201ENST00000215829 PRAM1Q96QH2 718 aa22.12■■□□□ 1.13
SNRPD3-201ENST00000215829 SIRT1Q96EB6 747 aa22.11■■□□□ 1.13
SNRPD3-201ENST00000215829 POGKQ9P215 609 aa22.11■■□□□ 1.13
SNRPD3-201ENST00000215829 TECPR2O15040 1411 aa22.11■■□□□ 1.13
SNRPD3-201ENST00000215829 KNDC1Q76NI1 1749 aa22.1■■□□□ 1.13
SNRPD3-201ENST00000215829 NCKAP5LQ9HCH0 1330 aa22.08■■□□□ 1.13
SNRPD3-201ENST00000215829 NPHP4O75161 1426 aaPredicted RBP22.08■■□□□ 1.13
SNRPD3-201ENST00000215829 SAFB2Q14151 953 aaKnown RBP eCLIP22.07■■□□□ 1.12
SNRPD3-201ENST00000215829 PTPRUQ92729 1446 aa22.07■■□□□ 1.12
SNRPD3-201ENST00000215829 PIK3R4Q99570 1358 aa22.07■■□□□ 1.12
SNRPD3-201ENST00000215829 CPS1P31327 1500 aa22.06■■□□□ 1.12
SNRPD3-201ENST00000215829 FAM135BQ49AJ0 1406 aa22.06■■□□□ 1.12
SNRPD3-201ENST00000215829 WAPLQ7Z5K2 1190 aa22.06■■□□□ 1.12
SNRPD3-201ENST00000215829 LMTK3Q96Q04 1460 aa22.05■■□□□ 1.12
SNRPD3-201ENST00000215829 AMOTL2Q9Y2J4 779 aa22.04■■□□□ 1.12
SNRPD3-201ENST00000215829 EVC2Q86UK5 1308 aa22.04■■□□□ 1.12
SNRPD3-201ENST00000215829 PLEKHH1Q9ULM0 1364 aa22.03■■□□□ 1.12
SNRPD3-201ENST00000215829 MIER1Q8N108 512 aa22.03■■□□□ 1.12
SNRPD3-201ENST00000215829 HSPA2P54652 639 aa22.02■■□□□ 1.12
SNRPD3-201ENST00000215829 PUS7Q96PZ0 661 aaKnown RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms