RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Puf60Q3UEB3 564 aaKnown RBP12.79□□□□□ -0.36
Sh3rf1-202ENSMUST00000209611 Safb2Q80YR5 991 aaKnown RBP12.79□□□□□ -0.36
Sh3rf1-202ENSMUST00000209611 Plch2A2AP18 1501 aa12.79□□□□□ -0.36
Sh3rf1-202ENSMUST00000209611 Ak9G3UYQ4 1894 aa12.79□□□□□ -0.36
Sh3rf1-202ENSMUST00000209611 Zscan10Q3URR7 782 aa12.78□□□□□ -0.36
Sh3rf1-202ENSMUST00000209611 Atp10aO54827 1508 aa12.78□□□□□ -0.36
Sh3rf1-202ENSMUST00000209611 Fam184bQ0KK56 942 aa12.78□□□□□ -0.36
Sh3rf1-202ENSMUST00000209611 Depdc5P61460 1591 aa12.78□□□□□ -0.36
Sh3rf1-202ENSMUST00000209611 Zscan21Q07231 555 aa12.77□□□□□ -0.36
Sh3rf1-202ENSMUST00000209611 Iqgap1Q9JKF1 1657 aaKnown RBP12.77□□□□□ -0.36
Sh3rf1-202ENSMUST00000209611 Xrn1P97789 1719 aaKnown RBP12.77□□□□□ -0.37
Sh3rf1-202ENSMUST00000209611 Abca17E9PX95 1733 aa12.77□□□□□ -0.37
Sh3rf1-202ENSMUST00000209611 PrxO55103 1391 aa12.76□□□□□ -0.37
Sh3rf1-202ENSMUST00000209611 Uggt2E9Q4X2 1504 aa12.76□□□□□ -0.37
Sh3rf1-202ENSMUST00000209611 Cnga1P29974 684 aa12.75□□□□□ -0.37
Sh3rf1-202ENSMUST00000209611 Afap1Q80YS6 731 aa12.75□□□□□ -0.37
Sh3rf1-202ENSMUST00000209611 4930567H17RikQ3V0K5 233 aa12.75□□□□□ -0.37
Sh3rf1-202ENSMUST00000209611 Tulp4Q9JIL5 1547 aa12.75□□□□□ -0.37
Sh3rf1-202ENSMUST00000209611 Stk26Q99JT2 416 aa12.74□□□□□ -0.37
Sh3rf1-202ENSMUST00000209611 AatkQ80YE4 1365 aa12.74□□□□□ -0.37
Sh3rf1-202ENSMUST00000209611 Rpgrip1lQ8CG73 1264 aa12.74□□□□□ -0.37
Sh3rf1-202ENSMUST00000209611 AnkarA2RT91 1465 aa12.74□□□□□ -0.37
Sh3rf1-202ENSMUST00000209611 Rad21Q61550 635 aaKnown RBP12.73□□□□□ -0.37
Sh3rf1-202ENSMUST00000209611 Abca6Q8K441 1624 aa12.73□□□□□ -0.37
Sh3rf1-202ENSMUST00000209611 Adamts13Q769J6 1426 aa12.73□□□□□ -0.37
Sh3rf1-202ENSMUST00000209611 Myo5cE9Q1F5 1742 aa12.72□□□□□ -0.37
Sh3rf1-202ENSMUST00000209611 Dcaf11Q91VU6 549 aa12.72□□□□□ -0.37
Sh3rf1-202ENSMUST00000209611 Talpid3E9PV87 1520 aa12.72□□□□□ -0.37
Sh3rf1-202ENSMUST00000209611 Exosc9Q9JHI7 438 aaKnown RBP12.72□□□□□ -0.37
Sh3rf1-202ENSMUST00000209611 Synj2Q9D2G5 1434 aa12.72□□□□□ -0.37
Sh3rf1-202ENSMUST00000209611 Kdm5cP41230 1554 aa12.71□□□□□ -0.37
Sh3rf1-202ENSMUST00000209611 Shq1Q7TMX5 569 aa12.71□□□□□ -0.38
Sh3rf1-202ENSMUST00000209611 Mak16Q8BGS0 296 aaKnown RBP12.71□□□□□ -0.38
Sh3rf1-202ENSMUST00000209611 CenpjQ569L8 1344 aa12.7□□□□□ -0.38
Sh3rf1-202ENSMUST00000209611 Slc52a2Q9D8F3 450 aa12.7□□□□□ -0.38
Sh3rf1-202ENSMUST00000209611 AglF8VPN4 1532 aa12.7□□□□□ -0.38
Sh3rf1-202ENSMUST00000209611 Yeats2Q3TUF7 1407 aa12.7□□□□□ -0.38
Sh3rf1-202ENSMUST00000209611 Rtl5Q5DTT4 599 aa12.7□□□□□ -0.38
Sh3rf1-202ENSMUST00000209611 SafbD3YXK2 937 aaKnown RBP12.69□□□□□ -0.38
Sh3rf1-202ENSMUST00000209611 Pknox2Q8BG99 474 aa12.69□□□□□ -0.38
Sh3rf1-202ENSMUST00000209611 Col17a1Q07563 1470 aa12.69□□□□□ -0.38
Sh3rf1-202ENSMUST00000209611 Dip2cE9PWR4 1557 aa12.69□□□□□ -0.38
Sh3rf1-202ENSMUST00000209611 Q7TT23 1179 aa12.68□□□□□ -0.38
Sh3rf1-202ENSMUST00000209611 Clasp1Q80TV8 1535 aaKnown RBP12.68□□□□□ -0.38
Sh3rf1-202ENSMUST00000209611 Cdc42bpgQ80UW5 1551 aa12.68□□□□□ -0.38
Sh3rf1-202ENSMUST00000209611 Upf2A2AT37 1269 aaKnown RBP12.68□□□□□ -0.38
Sh3rf1-202ENSMUST00000209611 Kif7B7ZNG0 1348 aa12.67□□□□□ -0.38
Sh3rf1-202ENSMUST00000209611 Topbp1Q6ZQF0 1515 aa12.67□□□□□ -0.38
Sh3rf1-202ENSMUST00000209611 NeflP08551 543 aa12.66□□□□□ -0.38
Sh3rf1-202ENSMUST00000209611 Prex1Q69ZK0 1650 aa12.66□□□□□ -0.38
Sh3rf1-202ENSMUST00000209611 Iqgap3F8VQ29 1632 aa12.66□□□□□ -0.38
Sh3rf1-202ENSMUST00000209611 RereQ80TZ9 1558 aa12.66□□□□□ -0.38
Sh3rf1-202ENSMUST00000209611 Sbno1Q689Z5 1390 aa12.65□□□□□ -0.38
Sh3rf1-202ENSMUST00000209611 Utp14aQ640M1 767 aaKnown RBP12.65□□□□□ -0.38
Sh3rf1-202ENSMUST00000209611 Ppp2r1aQ76MZ3 589 aa12.65□□□□□ -0.38
Sh3rf1-202ENSMUST00000209611 Cfap65Q3V0B4 1847 aa12.65□□□□□ -0.38
Sh3rf1-202ENSMUST00000209611 Psme1P97371 249 aa12.64□□□□□ -0.39
Sh3rf1-202ENSMUST00000209611 Txndc2Q6P902 515 aa12.64□□□□□ -0.39
Sh3rf1-202ENSMUST00000209611 Fndc1E9Q043 1732 aa12.64□□□□□ -0.39
Sh3rf1-202ENSMUST00000209611 Efcab6Q6P1E8 1516 aa12.64□□□□□ -0.39
Sh3rf1-202ENSMUST00000209611 Nphp4P59240 1425 aa12.64□□□□□ -0.39
Sh3rf1-202ENSMUST00000209611 Anp32aO35381 247 aa12.63□□□□□ -0.39
Sh3rf1-202ENSMUST00000209611 Q9D9H8 365 aa12.63□□□□□ -0.39
Sh3rf1-202ENSMUST00000209611 Setd1aE9PYH6 1716 aa12.63□□□□□ -0.39
Sh3rf1-202ENSMUST00000209611 Rab3gap2Q8BMG7 1366 aa12.63□□□□□ -0.39
Sh3rf1-202ENSMUST00000209611 Myo3aQ8K3H5 1613 aa12.62□□□□□ -0.39
Sh3rf1-202ENSMUST00000209611 NpatQ8BMA5 1420 aa12.62□□□□□ -0.39
Sh3rf1-202ENSMUST00000209611 Mink1Q9JM52 1308 aa12.62□□□□□ -0.39
Sh3rf1-202ENSMUST00000209611 Adgrb3Q80ZF8 1522 aa12.61□□□□□ -0.39
Sh3rf1-202ENSMUST00000209611 Cep152A2AUM9 1736 aaKnown RBP12.61□□□□□ -0.39
Sh3rf1-202ENSMUST00000209611 Hfm1D3Z4R1 1434 aa12.61□□□□□ -0.39
Sh3rf1-202ENSMUST00000209611 AU022751B1B0V2 589 aa12.61□□□□□ -0.39
Sh3rf1-202ENSMUST00000209611 Skint5A7XUY5 1461 aa12.61□□□□□ -0.39
Sh3rf1-202ENSMUST00000209611 Rims1Q99NE5 1463 aa12.61□□□□□ -0.39
Sh3rf1-202ENSMUST00000209611 Esx1O88933 382 aa12.6□□□□□ -0.39
Sh3rf1-202ENSMUST00000209611 Myom2Q14BI5 1463 aa12.6□□□□□ -0.39
Sh3rf1-202ENSMUST00000209611 Prrc2bQ7TPM1 1486 aaKnown RBP12.6□□□□□ -0.39
Sh3rf1-202ENSMUST00000209611 Ttc37F8VPK0 1563 aa12.58□□□□□ -0.39
Sh3rf1-202ENSMUST00000209611 PalldQ9ET54 1408 aa12.58□□□□□ -0.4
Sh3rf1-202ENSMUST00000209611 Ppp4r2Q0VGB7 417 aa12.58□□□□□ -0.4
Sh3rf1-202ENSMUST00000209611 Wdr43Q6ZQL4 677 aaKnown RBP12.58□□□□□ -0.4
Sh3rf1-202ENSMUST00000209611 Knl1Q66JQ7 1612 aa12.58□□□□□ -0.4
Sh3rf1-202ENSMUST00000209611 Lrrc7Q80TE7 1490 aa12.58□□□□□ -0.4
Sh3rf1-202ENSMUST00000209611 MyclP10166 368 aa12.57□□□□□ -0.4
Sh3rf1-202ENSMUST00000209611 Tecpr2Q3UH45 1423 aa12.57□□□□□ -0.4
Sh3rf1-202ENSMUST00000209611 Hecw2Q6I6G8 1578 aa12.57□□□□□ -0.4
Sh3rf1-202ENSMUST00000209611 Kiaa0556Q8C753 1610 aa12.57□□□□□ -0.4
Sh3rf1-202ENSMUST00000209611 CrbnQ8C7D2 445 aa12.57□□□□□ -0.4
Sh3rf1-202ENSMUST00000209611 Gm16486A0A1D5RMD1 1434 aa12.57□□□□□ -0.4
Sh3rf1-202ENSMUST00000209611 Tmem131lQ3U3D7 1597 aa12.57□□□□□ -0.4
Sh3rf1-202ENSMUST00000209611 Atp2b2Q9R0K7 1198 aa12.57□□□□□ -0.4
Sh3rf1-202ENSMUST00000209611 Abca8aQ8K442 1620 aa12.56□□□□□ -0.4
Sh3rf1-202ENSMUST00000209611 Gsto1O09131 240 aa12.56□□□□□ -0.4
Sh3rf1-202ENSMUST00000209611 Neurod2Q62414 383 aa12.55□□□□□ -0.4
Sh3rf1-202ENSMUST00000209611 Golga2Q921M4 999 aa12.55□□□□□ -0.4
Sh3rf1-202ENSMUST00000209611 Tubgcp6G5E8P0 1769 aa12.55□□□□□ -0.4
Sh3rf1-202ENSMUST00000209611 Zfp444Q3TDV8 331 aaKnown RBP12.55□□□□□ -0.4
Sh3rf1-202ENSMUST00000209611 Pola1P33609 1465 aa12.55□□□□□ -0.4
Sh3rf1-202ENSMUST00000209611 Speer4f1Q9D5Q6 258 aa12.55□□□□□ -0.4
Sh3rf1-202ENSMUST00000209611 Uggt1Q6P5E4 1551 aa12.54□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 58.7 ms