RNA–Protein interactions for RNA: ENSMUST00000194959.5

Usp4-209, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Usp4, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-209ENSMUST00000194959 Myt1Q8CFC2 1127 aa13.27□□□□□ -0.29
Usp4-209ENSMUST00000194959 Igf1rQ60751 1373 aa13.27□□□□□ -0.29
Usp4-209ENSMUST00000194959 Upf2A2AT37 1269 aaKnown RBP13.26□□□□□ -0.29
Usp4-209ENSMUST00000194959 IqubQ8CDK3 788 aa13.26□□□□□ -0.29
Usp4-209ENSMUST00000194959 DroshaQ5HZJ0 1373 aaKnown RBP13.26□□□□□ -0.29
Usp4-209ENSMUST00000194959 Znf316Q6PGE4 1016 aa13.25□□□□□ -0.29
Usp4-209ENSMUST00000194959 Golga2Q921M4 999 aa13.25□□□□□ -0.29
Usp4-209ENSMUST00000194959 Kif16bB1AVY7 1312 aa13.24□□□□□ -0.29
Usp4-209ENSMUST00000194959 Mink1Q9JM52 1308 aa13.23□□□□□ -0.29
Usp4-209ENSMUST00000194959 Gm32742A0A1B0GT42 1604 aa13.23□□□□□ -0.29
Usp4-209ENSMUST00000194959 Rwdd1Q9CQK7 243 aa13.23□□□□□ -0.29
Usp4-209ENSMUST00000194959 PtprtQ99M80 1454 aa13.23□□□□□ -0.29
Usp4-209ENSMUST00000194959 Shq1Q7TMX5 569 aa13.22□□□□□ -0.29
Usp4-209ENSMUST00000194959 ChgaP26339 463 aaKnown RBP13.22□□□□□ -0.29
Usp4-209ENSMUST00000194959 Kif21bQ9QXL1 1668 aa13.22□□□□□ -0.29
Usp4-209ENSMUST00000194959 Cdc42bpbQ7TT50 1713 aa13.21□□□□□ -0.29
Usp4-209ENSMUST00000194959 Usp54Q8BL06 1588 aaKnown RBP13.21□□□□□ -0.29
Usp4-209ENSMUST00000194959 Apaf1O88879 1249 aa13.2□□□□□ -0.3
Usp4-209ENSMUST00000194959 U2af1Q9D883 239 aaKnown RBP13.2□□□□□ -0.3
Usp4-209ENSMUST00000194959 Plin1Q8CGN5 517 aa13.2□□□□□ -0.3
Usp4-209ENSMUST00000194959 Ylpm1Q9R0I7 1386 aaKnown RBP13.2□□□□□ -0.3
Usp4-209ENSMUST00000194959 Abcc6Q9R1S7 1498 aa13.19□□□□□ -0.3
Usp4-209ENSMUST00000194959 Rab3gap2Q8BMG7 1366 aa13.19□□□□□ -0.3
Usp4-209ENSMUST00000194959 Q9D9H8 365 aa13.19□□□□□ -0.3
Usp4-209ENSMUST00000194959 Cfap74Q3UY96 1578 aa13.19□□□□□ -0.3
Usp4-209ENSMUST00000194959 4930567H17RikQ3V0K5 233 aa13.19□□□□□ -0.3
Usp4-209ENSMUST00000194959 Gas2l2Q5SSG4 860 aa13.19□□□□□ -0.3
Usp4-209ENSMUST00000194959 Ccdc30Q8BVF4 654 aa13.19□□□□□ -0.3
Usp4-209ENSMUST00000194959 Atxn3Q9CVD2 355 aa13.19□□□□□ -0.3
Usp4-209ENSMUST00000194959 Ptch1Q61115 1434 aa13.19□□□□□ -0.3
Usp4-209ENSMUST00000194959 Gm156Q58A37 223 aa13.19□□□□□ -0.3
Usp4-209ENSMUST00000194959 Mast1Q9R1L5 1570 aa13.18□□□□□ -0.3
Usp4-209ENSMUST00000194959 Gapvd1Q6PAR5 1458 aa13.18□□□□□ -0.3
Usp4-209ENSMUST00000194959 Rnf17Q99MV7 1640 aa13.18□□□□□ -0.3
Usp4-209ENSMUST00000194959 Afap1Q80YS6 731 aa13.17□□□□□ -0.3
Usp4-209ENSMUST00000194959 Chd1P40201 1711 aa13.17□□□□□ -0.3
Usp4-209ENSMUST00000194959 Adamts13Q769J6 1426 aa13.17□□□□□ -0.3
Usp4-209ENSMUST00000194959 Tulp4Q9JIL5 1547 aa13.17□□□□□ -0.3
Usp4-209ENSMUST00000194959 Utp14aQ640M1 767 aaKnown RBP13.17□□□□□ -0.3
Usp4-209ENSMUST00000194959 Kif1bQ60575 1816 aaKnown RBP13.16□□□□□ -0.3
Usp4-209ENSMUST00000194959 AatkQ80YE4 1365 aa13.16□□□□□ -0.3
Usp4-209ENSMUST00000194959 Kdm5cP41230 1554 aa13.16□□□□□ -0.3
Usp4-209ENSMUST00000194959 NhsB1AV60 1647 aa13.15□□□□□ -0.3
Usp4-209ENSMUST00000194959 Pank1Q8K4K6 548 aa13.15□□□□□ -0.3
Usp4-209ENSMUST00000194959 Chmp5Q9D7S9 219 aa13.15□□□□□ -0.3
Usp4-209ENSMUST00000194959 Kank1E9Q238 1360 aa13.14□□□□□ -0.31
Usp4-209ENSMUST00000194959 Trim30dE9PWL0 497 aa13.14□□□□□ -0.31
Usp4-209ENSMUST00000194959 Egfem1Q8C088 590 aa13.14□□□□□ -0.31
Usp4-209ENSMUST00000194959 NgefQ8CHT1 710 aa13.14□□□□□ -0.31
Usp4-209ENSMUST00000194959 Abcc3B2RX12 1523 aa13.14□□□□□ -0.31
Usp4-209ENSMUST00000194959 Ttll13A4Q9F6 804 aa13.14□□□□□ -0.31
Usp4-209ENSMUST00000194959 Tsen2Q6P7W5 460 aa13.14□□□□□ -0.31
Usp4-209ENSMUST00000194959 Tspyl2Q7TQI8 677 aa13.14□□□□□ -0.31
Usp4-209ENSMUST00000194959 Znf330Q922H9 316 aa13.13□□□□□ -0.31
Usp4-209ENSMUST00000194959 Iqgap1Q9JKF1 1657 aaKnown RBP13.13□□□□□ -0.31
Usp4-209ENSMUST00000194959 Ksr2Q3UVC0 959 aa13.13□□□□□ -0.31
Usp4-209ENSMUST00000194959 Rtl5Q5DTT4 599 aa13.13□□□□□ -0.31
Usp4-209ENSMUST00000194959 GsdmaQ9EST1 446 aa13.12□□□□□ -0.31
Usp4-209ENSMUST00000194959 AU022751B1B0V2 589 aa13.12□□□□□ -0.31
Usp4-209ENSMUST00000194959 Birc3O08863 600 aa13.12□□□□□ -0.31
Usp4-209ENSMUST00000194959 OvosQ3UU35 1456 aa13.11□□□□□ -0.31
Usp4-209ENSMUST00000194959 Zmym4A2A791 1549 aaKnown RBP13.11□□□□□ -0.31
Usp4-209ENSMUST00000194959 Abca8bQ8K440 1620 aa13.11□□□□□ -0.31
Usp4-209ENSMUST00000194959 Prkrip1Q9CWV6 186 aaKnown RBP13.11□□□□□ -0.31
Usp4-209ENSMUST00000194959 CanxP35564 591 aaKnown RBP13.1□□□□□ -0.31
Usp4-209ENSMUST00000194959 Kidins220E9Q9B7 1793 aa13.1□□□□□ -0.31
Usp4-209ENSMUST00000194959 ShprhQ7TPQ3 1674 aa13.1□□□□□ -0.31
Usp4-209ENSMUST00000194959 Stard8Q8K031 1019 aa13.1□□□□□ -0.31
Usp4-209ENSMUST00000194959 Cep170Q6A065 1588 aa13.1□□□□□ -0.31
Usp4-209ENSMUST00000194959 Gm16486A0A1D5RMD1 1434 aa13.1□□□□□ -0.31
Usp4-209ENSMUST00000194959 Ppip5k1A2ARP1 1436 aa13.09□□□□□ -0.31
Usp4-209ENSMUST00000194959 Gm6268A2A3U9 297 aa13.09□□□□□ -0.31
Usp4-209ENSMUST00000194959 Cluap1Q8R3P7 413 aa13.09□□□□□ -0.31
Usp4-209ENSMUST00000194959 Atp2b2Q9R0K7 1198 aa13.09□□□□□ -0.31
Usp4-209ENSMUST00000194959 CenpjQ569L8 1344 aa13.07□□□□□ -0.32
Usp4-209ENSMUST00000194959 Txndc2Q6P902 515 aa13.07□□□□□ -0.32
Usp4-209ENSMUST00000194959 Asxl2Q8BZ32 1370 aa13.07□□□□□ -0.32
Usp4-209ENSMUST00000194959 DaxxO35613 739 aa13.07□□□□□ -0.32
Usp4-209ENSMUST00000194959 Myo3aQ8K3H5 1613 aa13.06□□□□□ -0.32
Usp4-209ENSMUST00000194959 Ipo9Q91YE6 1041 aa13.06□□□□□ -0.32
Usp4-209ENSMUST00000194959 Zfyve16Q80U44 1528 aa13.06□□□□□ -0.32
Usp4-209ENSMUST00000194959 Nos1Q9Z0J4 1429 aa13.05□□□□□ -0.32
Usp4-209ENSMUST00000194959 Cald1E9QA15 768 aaKnown RBP13.04□□□□□ -0.32
Usp4-209ENSMUST00000194959 Safb2Q80YR5 991 aaKnown RBP13.04□□□□□ -0.32
Usp4-209ENSMUST00000194959 P2rx7Q9Z1M0 595 aa13.04□□□□□ -0.32
Usp4-209ENSMUST00000194959 Mapk8ip3Q9ESN9 1337 aa13.04□□□□□ -0.32
Usp4-209ENSMUST00000194959 Arid4bA2CG63 1314 aaKnown RBP13.04□□□□□ -0.32
Usp4-209ENSMUST00000194959 Plekhh1Q80TI1 1356 aa13.04□□□□□ -0.32
Usp4-209ENSMUST00000194959 Gli2Q0VGT2 1544 aa13.04□□□□□ -0.32
Usp4-209ENSMUST00000194959 Ak9G3UYQ4 1894 aa13.04□□□□□ -0.32
Usp4-209ENSMUST00000194959 Psme1P97371 249 aa13.04□□□□□ -0.32
Usp4-209ENSMUST00000194959 Pdcd11Q6NS46 1862 aaKnown RBP13.04□□□□□ -0.32
Usp4-209ENSMUST00000194959 Tmco5bQ80X59 307 aa13.03□□□□□ -0.32
Usp4-209ENSMUST00000194959 Nutm1Q8BHP2 1126 aa13.03□□□□□ -0.32
Usp4-209ENSMUST00000194959 Col17a1Q07563 1470 aa13.03□□□□□ -0.32
Usp4-209ENSMUST00000194959 Abca6Q8K441 1624 aa13.03□□□□□ -0.32
Usp4-209ENSMUST00000194959 1700019A02RikA0A087WPV9 146 aa13.03□□□□□ -0.32
Usp4-209ENSMUST00000194959 EspnQ9ET47 871 aa13.03□□□□□ -0.32
Usp4-209ENSMUST00000194959 Tex14Q7M6U3 1450 aa13.03□□□□□ -0.32
Usp4-209ENSMUST00000194959 Znf518aB2RRF6 1478 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 42.1 ms