RNA–Protein interactions for RNA: ENSMUST00000185355.6

Ldb1-208, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-208ENSMUST00000185355 Pank3Q8R2W9 370 aa37.57■■■■□ 3.6
Ldb1-208ENSMUST00000185355 Adgrb3Q80ZF8 1522 aa37.56■■■■□ 3.6
Ldb1-208ENSMUST00000185355 Ofd1Q80Z25 1017 aa37.56■■■■□ 3.6
Ldb1-208ENSMUST00000185355 Rims1Q99NE5 1463 aa37.55■■■■□ 3.6
Ldb1-208ENSMUST00000185355 Akap12Q9WTQ5 1684 aa37.54■■■■□ 3.6
Ldb1-208ENSMUST00000185355 Prdm2A2A7B5 1709 aaKnown RBP37.53■■■■□ 3.6
Ldb1-208ENSMUST00000185355 Tmf1B9EKI3 1091 aa37.53■■■■□ 3.6
Ldb1-208ENSMUST00000185355 Kdm2aP59997 1161 aa37.52■■■■□ 3.6
Ldb1-208ENSMUST00000185355 Rpgrip1lQ8CG73 1264 aa37.51■■■■□ 3.6
Ldb1-208ENSMUST00000185355 Efcab6Q6P1E8 1516 aa37.51■■■■□ 3.59
Ldb1-208ENSMUST00000185355 Kiaa0556Q8C753 1610 aa37.5■■■■□ 3.59
Ldb1-208ENSMUST00000185355 Anp32aO35381 247 aa37.5■■■■□ 3.59
Ldb1-208ENSMUST00000185355 Stard8Q8K031 1019 aa37.48■■■■□ 3.59
Ldb1-208ENSMUST00000185355 Clasp1Q80TV8 1535 aaKnown RBP37.48■■■■□ 3.59
Ldb1-208ENSMUST00000185355 Col17a1Q07563 1470 aa37.48■■■■□ 3.59
Ldb1-208ENSMUST00000185355 Zscan21Q07231 555 aa37.48■■■■□ 3.59
Ldb1-208ENSMUST00000185355 Zscan10Q3URR7 782 aa37.47■■■■□ 3.59
Ldb1-208ENSMUST00000185355 Inpp5dQ9ES52 1191 aa37.46■■■■□ 3.59
Ldb1-208ENSMUST00000185355 Myom2Q14BI5 1463 aa37.46■■■■□ 3.59
Ldb1-208ENSMUST00000185355 Ptch1Q61115 1434 aa37.46■■■■□ 3.59
Ldb1-208ENSMUST00000185355 Cdk5rap2Q8K389 1822 aa37.45■■■■□ 3.59
Ldb1-208ENSMUST00000185355 Tecpr2Q3UH45 1423 aa37.45■■■■□ 3.59
Ldb1-208ENSMUST00000185355 RereQ80TZ9 1558 aa37.45■■■■□ 3.58
Ldb1-208ENSMUST00000185355 Gm16486A0A1D5RMD1 1434 aa37.45■■■■□ 3.58
Ldb1-208ENSMUST00000185355 AatkQ80YE4 1365 aa37.44■■■■□ 3.58
Ldb1-208ENSMUST00000185355 Stk24Q99KH8 431 aa37.44■■■■□ 3.58
Ldb1-208ENSMUST00000185355 Myo3aQ8K3H5 1613 aa37.44■■■■□ 3.58
Ldb1-208ENSMUST00000185355 Gm20521D3Z5F7 333 aa37.43■■■■□ 3.58
Ldb1-208ENSMUST00000185355 AdgbG3UZ78 1657 aa37.43■■■■□ 3.58
Ldb1-208ENSMUST00000185355 Gm156Q58A37 223 aa37.43■■■■□ 3.58
Ldb1-208ENSMUST00000185355 Dip2cE9PWR4 1557 aa37.42■■■■□ 3.58
Ldb1-208ENSMUST00000185355 Ttbk1Q6PCN3 1308 aa37.41■■■■□ 3.58
Ldb1-208ENSMUST00000185355 Tex14Q7M6U3 1450 aa37.41■■■■□ 3.58
Ldb1-208ENSMUST00000185355 Ino80Q6ZPV2 1559 aa37.41■■■■□ 3.58
Ldb1-208ENSMUST00000185355 Os9Q8K2C7 672 aa37.4■■■■□ 3.58
Ldb1-208ENSMUST00000185355 Nphp4P59240 1425 aa37.38■■■■□ 3.58
Ldb1-208ENSMUST00000185355 Srpk2O54781 681 aaKnown RBP37.37■■■■□ 3.57
Ldb1-208ENSMUST00000185355 DnmbpQ6TXD4 1580 aa37.36■■■■□ 3.57
Ldb1-208ENSMUST00000185355 Sipa1l1Q8C0T5 1782 aa37.35■■■■□ 3.57
Ldb1-208ENSMUST00000185355 Talpid3E9PV87 1520 aa37.35■■■■□ 3.57
Ldb1-208ENSMUST00000185355 Slc4a1apE9PX68 744 aa37.33■■■■□ 3.57
Ldb1-208ENSMUST00000185355 Cul9Q80TT8 1865 aa37.33■■■■□ 3.57
Ldb1-208ENSMUST00000185355 Fam184bQ0KK56 942 aa37.33■■■■□ 3.57
Ldb1-208ENSMUST00000185355 P3h3Q8CG70 732 aa37.33■■■■□ 3.57
Ldb1-208ENSMUST00000185355 Gtf2e1Q9D0D5 440 aa37.33■■■■□ 3.57
Ldb1-208ENSMUST00000185355 Mak16Q8BGS0 296 aaKnown RBP37.32■■■■□ 3.57
Ldb1-208ENSMUST00000185355 Uggt1Q6P5E4 1551 aa37.32■■■■□ 3.56
Ldb1-208ENSMUST00000185355 Kdm5aQ3UXZ9 1690 aa37.31■■■■□ 3.56
Ldb1-208ENSMUST00000185355 Q7TT23 1179 aa37.3■■■■□ 3.56
Ldb1-208ENSMUST00000185355 Plxnc1Q9QZC2 1574 aa37.27■■■■□ 3.56
Ldb1-208ENSMUST00000185355 Usp40Q8BWR4 1235 aa37.26■■■■□ 3.56
Ldb1-208ENSMUST00000185355 Fan1Q69ZT1 1020 aa37.25■■■■□ 3.55
Ldb1-208ENSMUST00000185355 Adamts7Q68SA9 1657 aa37.25■■■■□ 3.55
Ldb1-208ENSMUST00000185355 L3mbtl2P59178 703 aa37.22■■■■□ 3.55
Ldb1-208ENSMUST00000185355 Kank1E9Q238 1360 aa37.21■■■■□ 3.55
Ldb1-208ENSMUST00000185355 Rab3gap2Q8BMG7 1366 aa37.21■■■■□ 3.55
Ldb1-208ENSMUST00000185355 Adgrl3Q80TS3 1537 aa37.21■■■■□ 3.55
Ldb1-208ENSMUST00000185355 Wdr43Q6ZQL4 677 aaKnown RBP37.19■■■■□ 3.54
Ldb1-208ENSMUST00000185355 Knl1Q66JQ7 1612 aa37.17■■■■□ 3.54
Ldb1-208ENSMUST00000185355 Ppp2r1aQ76MZ3 589 aa37.16■■■■□ 3.54
Ldb1-208ENSMUST00000185355 Mroh1E0CZ22 1640 aa37.15■■■■□ 3.54
Ldb1-208ENSMUST00000185355 Zfp444Q3TDV8 331 aaKnown RBP37.14■■■■□ 3.54
Ldb1-208ENSMUST00000185355 Atf7ipQ7TT18 1306 aa37.14■■■■□ 3.54
Ldb1-208ENSMUST00000185355 Upf2A2AT37 1269 aaKnown RBP37.13■■■■□ 3.53
Ldb1-208ENSMUST00000185355 Puf60Q3UEB3 564 aaKnown RBP37.13■■■■□ 3.53
Ldb1-208ENSMUST00000185355 Fam71e1A1L3C1 212 aa37.11■■■■□ 3.53
Ldb1-208ENSMUST00000185355 Nolc1E9Q5C9 702 aaKnown RBP37.11■■■■□ 3.53
Ldb1-208ENSMUST00000185355 Ift172Q6VH22 1749 aa37.1■■■■□ 3.53
Ldb1-208ENSMUST00000185355 Yeats2Q3TUF7 1407 aa37.08■■■■□ 3.53
Ldb1-208ENSMUST00000185355 Ttc37F8VPK0 1563 aa37.06■■■■□ 3.52
Ldb1-208ENSMUST00000185355 PalldQ9ET54 1408 aa37.06■■■■□ 3.52
Ldb1-208ENSMUST00000185355 Myom1Q62234 1667 aaKnown RBP37.06■■■■□ 3.52
Ldb1-208ENSMUST00000185355 Synj2Q9D2G5 1434 aa37.05■■■■□ 3.52
Ldb1-208ENSMUST00000185355 Hecw2Q6I6G8 1578 aa37.05■■■■□ 3.52
Ldb1-208ENSMUST00000185355 Skint5A7XUY5 1461 aa37.05■■■■□ 3.52
Ldb1-208ENSMUST00000185355 Ppp4r2Q0VGB7 417 aa37.05■■■■□ 3.52
Ldb1-208ENSMUST00000185355 Cfap65Q3V0B4 1847 aa37.03■■■■□ 3.52
Ldb1-208ENSMUST00000185355 MaddQ80U28 1577 aa37.03■■■■□ 3.52
Ldb1-208ENSMUST00000185355 AU022751B1B0V2 589 aa37.03■■■■□ 3.52
Ldb1-208ENSMUST00000185355 Lrrc7Q80TE7 1490 aa37.02■■■■□ 3.52
Ldb1-208ENSMUST00000185355 Slc52a2Q9D8F3 450 aa37.01■■■■□ 3.52
Ldb1-208ENSMUST00000185355 Kif7B7ZNG0 1348 aa37■■■■□ 3.51
Ldb1-208ENSMUST00000185355 Erbb3Q61526 1339 aa37■■■■□ 3.51
Ldb1-208ENSMUST00000185355 Gprasp1Q5U4C1 1347 aa37■■■■□ 3.51
Ldb1-208ENSMUST00000185355 Eif2ak4Q9QZ05 1648 aa36.94■■■■□ 3.5
Ldb1-208ENSMUST00000185355 Esx1O88933 382 aa36.93■■■■□ 3.5
Ldb1-208ENSMUST00000185355 InsrP15208 1372 aa36.93■■■■□ 3.5
Ldb1-208ENSMUST00000185355 Mink1Q9JM52 1308 aa36.91■■■■□ 3.5
Ldb1-208ENSMUST00000185355 Myt1Q8CFC2 1127 aa36.91■■■■□ 3.5
Ldb1-208ENSMUST00000185355 Ahdc1Q6PAL7 1594 aaKnown RBP36.91■■■■□ 3.5
Ldb1-208ENSMUST00000185355 Dcaf11Q91VU6 549 aa36.9■■■■□ 3.5
Ldb1-208ENSMUST00000185355 Ttc41Q692V3 1318 aa36.9■■■■□ 3.5
Ldb1-208ENSMUST00000185355 Stag3O70576 1240 aa36.89■■■■□ 3.5
Ldb1-208ENSMUST00000185355 Rad21Q61550 635 aaKnown RBP36.89■■■■□ 3.5
Ldb1-208ENSMUST00000185355 IqubQ8CDK3 788 aa36.88■■■■□ 3.49
Ldb1-208ENSMUST00000185355 KdrP35918 1367 aa36.88■■■■□ 3.49
Ldb1-208ENSMUST00000185355 Kif16bB1AVY7 1312 aa36.87■■■■□ 3.49
Ldb1-208ENSMUST00000185355 Hfm1D3Z4R1 1434 aa36.84■■■■□ 3.49
Ldb1-208ENSMUST00000185355 Rsph4aQ8BYM7 716 aa36.83■■■■□ 3.49
Ldb1-208ENSMUST00000185355 Qser1A2BIE1 1698 aa36.83■■■■□ 3.49
Retrieved 100 of 22,080 RNA–protein pairs in 7.9 ms