RNA–Protein interactions for RNA: ENSMUST00000110522.9

Trim9-202, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-202ENSMUST00000110522 Ccdc9Q8VC31 543 aaKnown RBP14.18□□□□□ -0.14
Trim9-202ENSMUST00000110522 Gm21190A0A0G2JGJ6 266 aa14.18□□□□□ -0.14
Trim9-202ENSMUST00000110522 Rab3gap2Q8BMG7 1366 aa14.17□□□□□ -0.14
Trim9-202ENSMUST00000110522 Rfx7F8VPJ6 1459 aa14.17□□□□□ -0.14
Trim9-202ENSMUST00000110522 Mlh3A0A1Y7VMP7 1443 aa14.17□□□□□ -0.14
Trim9-202ENSMUST00000110522 Nectin2P32507 530 aa14.17□□□□□ -0.14
Trim9-202ENSMUST00000110522 Rprd2Q6NXI6 1469 aaKnown RBP14.17□□□□□ -0.14
Trim9-202ENSMUST00000110522 Cc2d1aQ8K1A6 943 aa14.17□□□□□ -0.14
Trim9-202ENSMUST00000110522 Ttc21bQ0HA38 1315 aa14.17□□□□□ -0.14
Trim9-202ENSMUST00000110522 Ccdc146E9Q9F7 977 aa14.16□□□□□ -0.14
Trim9-202ENSMUST00000110522 Pak3Q61036 559 aa14.16□□□□□ -0.14
Trim9-202ENSMUST00000110522 Trim58Q5NCC9 485 aa14.16□□□□□ -0.14
Trim9-202ENSMUST00000110522 Sart3Q9JLI8 962 aaKnown RBP14.16□□□□□ -0.14
Trim9-202ENSMUST00000110522 Trim44Q9QXA7 346 aa14.16□□□□□ -0.14
Trim9-202ENSMUST00000110522 Nutm1Q8BHP2 1126 aa14.15□□□□□ -0.14
Trim9-202ENSMUST00000110522 Bcl11aQ9QYE3 773 aa14.15□□□□□ -0.14
Trim9-202ENSMUST00000110522 Igf1rQ60751 1373 aa14.15□□□□□ -0.14
Trim9-202ENSMUST00000110522 PtmaP26350 111 aa14.14□□□□□ -0.15
Trim9-202ENSMUST00000110522 Ythdc1E9Q5K9 736 aaKnown RBP14.14□□□□□ -0.15
Trim9-202ENSMUST00000110522 Atp10dQ8K2X1 1416 aa14.14□□□□□ -0.15
Trim9-202ENSMUST00000110522 WizO88286 1684 aaKnown RBP14.14□□□□□ -0.15
Trim9-202ENSMUST00000110522 L3mbtl2P59178 703 aa14.13□□□□□ -0.15
Trim9-202ENSMUST00000110522 Ncoa1P70365 1447 aa14.13□□□□□ -0.15
Trim9-202ENSMUST00000110522 Trappc8E9PWG2 1437 aa14.12□□□□□ -0.15
Trim9-202ENSMUST00000110522 Prkrip1Q9CWV6 186 aaKnown RBP14.12□□□□□ -0.15
Trim9-202ENSMUST00000110522 Caskin1Q6P9K8 1431 aa14.11□□□□□ -0.15
Trim9-202ENSMUST00000110522 Usp16Q99LG0 825 aa14.11□□□□□ -0.15
Trim9-202ENSMUST00000110522 Eif4g1Q6NZJ6 1600 aaKnown RBP14.1□□□□□ -0.15
Trim9-202ENSMUST00000110522 Rbm25B2RY56 838 aaKnown RBP14.1□□□□□ -0.15
Trim9-202ENSMUST00000110522 Ttll13A4Q9F6 804 aa14.1□□□□□ -0.15
Trim9-202ENSMUST00000110522 Cdk19Q8BWD8 501 aa14.1□□□□□ -0.15
Trim9-202ENSMUST00000110522 Shroom2A2ALU4 1481 aa14.1□□□□□ -0.15
Trim9-202ENSMUST00000110522 Fam135aQ6NS59 1506 aa14.1□□□□□ -0.15
Trim9-202ENSMUST00000110522 Ak7Q9D2H2 614 aa14.09□□□□□ -0.15
Trim9-202ENSMUST00000110522 Polr3aB2RXC6 1390 aa14.09□□□□□ -0.15
Trim9-202ENSMUST00000110522 FanciQ8K368 1330 aa14.09□□□□□ -0.15
Trim9-202ENSMUST00000110522 Eif2s2Q99L45 331 aaKnown RBP14.08□□□□□ -0.15
Trim9-202ENSMUST00000110522 Swt1Q9DBQ9 907 aa14.08□□□□□ -0.15
Trim9-202ENSMUST00000110522 Plekhh1Q80TI1 1356 aa14.08□□□□□ -0.15
Trim9-202ENSMUST00000110522 Pik3c2gO70167 1506 aa14.08□□□□□ -0.16
Trim9-202ENSMUST00000110522 Pes1Q9EQ61 584 aaKnown RBP14.08□□□□□ -0.16
Trim9-202ENSMUST00000110522 Triml2E9PW10 424 aa14.07□□□□□ -0.16
Trim9-202ENSMUST00000110522 KarsQ99MN1 595 aaKnown RBP14.07□□□□□ -0.16
Trim9-202ENSMUST00000110522 Fancd2Q80V62 1450 aa14.07□□□□□ -0.16
Trim9-202ENSMUST00000110522 MccE9PWI3 1003 aa14.06□□□□□ -0.16
Trim9-202ENSMUST00000110522 Asxl1P59598 1514 aa14.06□□□□□ -0.16
Trim9-202ENSMUST00000110522 Dusp27Q148W8 1138 aa14.06□□□□□ -0.16
Trim9-202ENSMUST00000110522 Slc4a10Q5DTL9 1118 aa14.05□□□□□ -0.16
Trim9-202ENSMUST00000110522 HnrnpmQ9D0E1 729 aaKnown RBP14.05□□□□□ -0.16
Trim9-202ENSMUST00000110522 Ggt6Q6PDE7 497 aa14.05□□□□□ -0.16
Trim9-202ENSMUST00000110522 Sh3bp5Q9Z131 463 aa14.05□□□□□ -0.16
Trim9-202ENSMUST00000110522 Brpf1B2RRD7 1212 aa14.04□□□□□ -0.16
Trim9-202ENSMUST00000110522 Eif4g2Q62448 906 aaKnown RBP14.04□□□□□ -0.16
Trim9-202ENSMUST00000110522 Rassf8Q8CJ96 419 aa14.04□□□□□ -0.16
Trim9-202ENSMUST00000110522 Magi3Q9EQJ9 1476 aa14.04□□□□□ -0.16
Trim9-202ENSMUST00000110522 Prex2Q3LAC4 1598 aa14.04□□□□□ -0.16
Trim9-202ENSMUST00000110522 Cald1E9QA15 768 aaKnown RBP14.04□□□□□ -0.16
Trim9-202ENSMUST00000110522 MpripP97434 1024 aa14.04□□□□□ -0.16
Trim9-202ENSMUST00000110522 Ythdc2B2RR83 1445 aaKnown RBP14.04□□□□□ -0.16
Trim9-202ENSMUST00000110522 Atp7aQ64430 1491 aa14.04□□□□□ -0.16
Trim9-202ENSMUST00000110522 Clstn1Q9EPL2 979 aa14.04□□□□□ -0.16
Trim9-202ENSMUST00000110522 Kif21aQ9QXL2 1672 aa14.04□□□□□ -0.16
Trim9-202ENSMUST00000110522 Gnai1B2RSH2 354 aa14.04□□□□□ -0.16
Trim9-202ENSMUST00000110522 Fyb1O35601 819 aa14.04□□□□□ -0.16
Trim9-202ENSMUST00000110522 Ric3Q8BPM6 367 aa14.04□□□□□ -0.16
Trim9-202ENSMUST00000110522 Gnai3Q9DC51 354 aa14.04□□□□□ -0.16
Trim9-202ENSMUST00000110522 Cavin4A2AMM0 362 aa14.03□□□□□ -0.16
Trim9-202ENSMUST00000110522 Ylpm1Q9R0I7 1386 aaKnown RBP14.03□□□□□ -0.16
Trim9-202ENSMUST00000110522 Adgrb2Q8CGM1 1561 aa14.03□□□□□ -0.16
Trim9-202ENSMUST00000110522 HdgfP51859 237 aaKnown RBP14.02□□□□□ -0.16
Trim9-202ENSMUST00000110522 Arhgef40Q3UPH7 1517 aa14.02□□□□□ -0.16
Trim9-202ENSMUST00000110522 Rapgef6Q5NCJ1 1609 aa14.02□□□□□ -0.16
Trim9-202ENSMUST00000110522 Zranb1Q7M760 708 aa14.01□□□□□ -0.17
Trim9-202ENSMUST00000110522 Slc52a2Q9D8F3 450 aa14.01□□□□□ -0.17
Trim9-202ENSMUST00000110522 Irx3P81067 507 aa14□□□□□ -0.17
Trim9-202ENSMUST00000110522 Q8BT18 775 aa14□□□□□ -0.17
Trim9-202ENSMUST00000110522 Atxn3Q9CVD2 355 aa14□□□□□ -0.17
Trim9-202ENSMUST00000110522 MecomP14404 1042 aa14□□□□□ -0.17
Trim9-202ENSMUST00000110522 Casc1Q6TDU8 730 aa14□□□□□ -0.17
Trim9-202ENSMUST00000110522 Ciz1Q8VEH2 845 aa14□□□□□ -0.17
Trim9-202ENSMUST00000110522 Chmp3Q9CQ10 224 aa13.99□□□□□ -0.17
Trim9-202ENSMUST00000110522 Cabp2Q9JLK4 216 aa13.99□□□□□ -0.17
Trim9-202ENSMUST00000110522 AI481877A2ALV5 1481 aa13.99□□□□□ -0.17
Trim9-202ENSMUST00000110522 Rfx1P48377 963 aa13.99□□□□□ -0.17
Trim9-202ENSMUST00000110522 TatQ8QZR1 454 aa13.98□□□□□ -0.17
Trim9-202ENSMUST00000110522 Dnttip2Q8R2M2 758 aaKnown RBP13.98□□□□□ -0.17
Trim9-202ENSMUST00000110522 Bcl2l13P59017 434 aa13.98□□□□□ -0.17
Trim9-202ENSMUST00000110522 Ssh2Q5SW75 1423 aa13.98□□□□□ -0.17
Trim9-202ENSMUST00000110522 Gm156Q58A37 223 aa13.97□□□□□ -0.17
Trim9-202ENSMUST00000110522 PalmQ9Z0P4 383 aa13.97□□□□□ -0.17
Trim9-202ENSMUST00000110522 Mapkbp1Q6NS57 1503 aa13.97□□□□□ -0.17
Trim9-202ENSMUST00000110522 Ccdc183A2AJB1 534 aa13.97□□□□□ -0.17
Trim9-202ENSMUST00000110522 Tspyl2Q7TQI8 677 aa13.97□□□□□ -0.17
Trim9-202ENSMUST00000110522 Pip4k2bQ80XI4 416 aa13.97□□□□□ -0.17
Trim9-202ENSMUST00000110522 Nup160Q9Z0W3 1402 aaKnown RBP13.97□□□□□ -0.17
Trim9-202ENSMUST00000110522 Wdr7Q920I9 1489 aa13.97□□□□□ -0.17
Trim9-202ENSMUST00000110522 OvosQ3UU35 1456 aa13.96□□□□□ -0.17
Trim9-202ENSMUST00000110522 Erich3F6QRE9 1637 aa13.96□□□□□ -0.18
Trim9-202ENSMUST00000110522 Cgnl1Q6AW69 1298 aa13.95□□□□□ -0.18
Trim9-202ENSMUST00000110522 Nol10Q5RJG1 687 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 42.3 ms