RNA–Protein interactions for RNA: ENSMUST00000109213.8

Trim7-202, Transcript of E3 ubiquitin-protein ligase TRIM7, mousemouse

TSL 1 (best) BASIC

Gene Trim7, Length 2,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim7-202ENSMUST00000109213 Ptch1Q61115 1434 aa21.67■■□□□ 1.06
Trim7-202ENSMUST00000109213 Cdc42bpgQ80UW5 1551 aa21.66■■□□□ 1.06
Trim7-202ENSMUST00000109213 Eif5bQ05D44 1216 aaKnown RBP21.65■■□□□ 1.06
Trim7-202ENSMUST00000109213 AatkQ80YE4 1365 aa21.65■■□□□ 1.06
Trim7-202ENSMUST00000109213 Rpgrip1lQ8CG73 1264 aa21.65■■□□□ 1.06
Trim7-202ENSMUST00000109213 Stk24Q99KH8 431 aa21.65■■□□□ 1.06
Trim7-202ENSMUST00000109213 Trpm1Q2TV84 1622 aa21.64■■□□□ 1.06
Trim7-202ENSMUST00000109213 Rims1Q99NE5 1463 aa21.64■■□□□ 1.05
Trim7-202ENSMUST00000109213 Clasp1Q80TV8 1535 aaKnown RBP21.63■■□□□ 1.05
Trim7-202ENSMUST00000109213 Adgrb3Q80ZF8 1522 aa21.63■■□□□ 1.05
Trim7-202ENSMUST00000109213 Inpp5dQ9ES52 1191 aa21.63■■□□□ 1.05
Trim7-202ENSMUST00000109213 Anp32bQ9EST5 272 aaKnown RBP21.63■■□□□ 1.05
Trim7-202ENSMUST00000109213 Ehbp1l1Q99MS7 1716 aa21.62■■□□□ 1.05
Trim7-202ENSMUST00000109213 Kiaa0556Q8C753 1610 aa21.62■■□□□ 1.05
Trim7-202ENSMUST00000109213 Ofd1Q80Z25 1017 aa21.61■■□□□ 1.05
Trim7-202ENSMUST00000109213 Tmf1B9EKI3 1091 aa21.61■■□□□ 1.05
Trim7-202ENSMUST00000109213 Gm20521D3Z5F7 333 aa21.61■■□□□ 1.05
Trim7-202ENSMUST00000109213 Zscan10Q3URR7 782 aa21.61■■□□□ 1.05
Trim7-202ENSMUST00000109213 Zmym4A2A791 1549 aaKnown RBP21.61■■□□□ 1.05
Trim7-202ENSMUST00000109213 Dip2cE9PWR4 1557 aa21.6■■□□□ 1.05
Trim7-202ENSMUST00000109213 Anp32aO35381 247 aa21.6■■□□□ 1.05
Trim7-202ENSMUST00000109213 Tecpr2Q3UH45 1423 aa21.6■■□□□ 1.05
Trim7-202ENSMUST00000109213 RereQ80TZ9 1558 aa21.6■■□□□ 1.05
Trim7-202ENSMUST00000109213 Arid4bA2CG63 1314 aaKnown RBP21.6■■□□□ 1.05
Trim7-202ENSMUST00000109213 Akap12Q9WTQ5 1684 aa21.6■■□□□ 1.05
Trim7-202ENSMUST00000109213 Myo3aQ8K3H5 1613 aa21.6■■□□□ 1.05
Trim7-202ENSMUST00000109213 Itsn2Q9Z0R6 1659 aa21.59■■□□□ 1.05
Trim7-202ENSMUST00000109213 Efcab6Q6P1E8 1516 aa21.58■■□□□ 1.05
Trim7-202ENSMUST00000109213 Prdm2A2A7B5 1709 aaKnown RBP21.58■■□□□ 1.04
Trim7-202ENSMUST00000109213 AdgbG3UZ78 1657 aa21.58■■□□□ 1.04
Trim7-202ENSMUST00000109213 Zscan21Q07231 555 aa21.57■■□□□ 1.04
Trim7-202ENSMUST00000109213 Stard8Q8K031 1019 aa21.57■■□□□ 1.04
Trim7-202ENSMUST00000109213 Myom2Q14BI5 1463 aa21.56■■□□□ 1.04
Trim7-202ENSMUST00000109213 Gm16486A0A1D5RMD1 1434 aa21.56■■□□□ 1.04
Trim7-202ENSMUST00000109213 Cdk5rap2Q8K389 1822 aa21.56■■□□□ 1.04
Trim7-202ENSMUST00000109213 Os9Q8K2C7 672 aa21.56■■□□□ 1.04
Trim7-202ENSMUST00000109213 Ttbk1Q6PCN3 1308 aa21.55■■□□□ 1.04
Trim7-202ENSMUST00000109213 Slc4a1apE9PX68 744 aa21.55■■□□□ 1.04
Trim7-202ENSMUST00000109213 Srpk2O54781 681 aaKnown RBP21.55■■□□□ 1.04
Trim7-202ENSMUST00000109213 Q7TT23 1179 aa21.55■■□□□ 1.04
Trim7-202ENSMUST00000109213 Ino80Q6ZPV2 1559 aa21.55■■□□□ 1.04
Trim7-202ENSMUST00000109213 Gtf2e1Q9D0D5 440 aa21.54■■□□□ 1.04
Trim7-202ENSMUST00000109213 Nphp4P59240 1425 aa21.54■■□□□ 1.04
Trim7-202ENSMUST00000109213 P3h3Q8CG70 732 aa21.54■■□□□ 1.04
Trim7-202ENSMUST00000109213 Fam184bQ0KK56 942 aa21.53■■□□□ 1.04
Trim7-202ENSMUST00000109213 Adgrl3Q80TS3 1537 aa21.53■■□□□ 1.04
Trim7-202ENSMUST00000109213 Tex14Q7M6U3 1450 aa21.53■■□□□ 1.04
Trim7-202ENSMUST00000109213 Fan1Q69ZT1 1020 aa21.52■■□□□ 1.04
Trim7-202ENSMUST00000109213 Usp40Q8BWR4 1235 aa21.52■■□□□ 1.04
Trim7-202ENSMUST00000109213 Cul9Q80TT8 1865 aa21.51■■□□□ 1.03
Trim7-202ENSMUST00000109213 DnmbpQ6TXD4 1580 aa21.5■■□□□ 1.03
Trim7-202ENSMUST00000109213 Talpid3E9PV87 1520 aa21.49■■□□□ 1.03
Trim7-202ENSMUST00000109213 Sipa1l1Q8C0T5 1782 aa21.49■■□□□ 1.03
Trim7-202ENSMUST00000109213 Mak16Q8BGS0 296 aaKnown RBP21.48■■□□□ 1.03
Trim7-202ENSMUST00000109213 Uggt1Q6P5E4 1551 aa21.46■■□□□ 1.03
Trim7-202ENSMUST00000109213 L3mbtl2P59178 703 aa21.46■■□□□ 1.03
Trim7-202ENSMUST00000109213 Yeats2Q3TUF7 1407 aa21.46■■□□□ 1.03
Trim7-202ENSMUST00000109213 Adamts7Q68SA9 1657 aa21.45■■□□□ 1.02
Trim7-202ENSMUST00000109213 Puf60Q3UEB3 564 aaKnown RBP21.45■■□□□ 1.02
Trim7-202ENSMUST00000109213 AU022751B1B0V2 589 aa21.45■■□□□ 1.02
Trim7-202ENSMUST00000109213 Ppp2r1aQ76MZ3 589 aa21.44■■□□□ 1.02
Trim7-202ENSMUST00000109213 Plxnc1Q9QZC2 1574 aa21.43■■□□□ 1.02
Trim7-202ENSMUST00000109213 Rtl5Q5DTT4 599 aa21.43■■□□□ 1.02
Trim7-202ENSMUST00000109213 Mroh1E0CZ22 1640 aa21.42■■□□□ 1.02
Trim7-202ENSMUST00000109213 Knl1Q66JQ7 1612 aa21.42■■□□□ 1.02
Trim7-202ENSMUST00000109213 Kdm5aQ3UXZ9 1690 aa21.42■■□□□ 1.02
Trim7-202ENSMUST00000109213 Zfp444Q3TDV8 331 aaKnown RBP21.41■■□□□ 1.02
Trim7-202ENSMUST00000109213 Rab3gap2Q8BMG7 1366 aa21.41■■□□□ 1.02
Trim7-202ENSMUST00000109213 Kank1E9Q238 1360 aa21.41■■□□□ 1.02
Trim7-202ENSMUST00000109213 Synj2Q9D2G5 1434 aa21.38■■□□□ 1.01
Trim7-202ENSMUST00000109213 Ttc37F8VPK0 1563 aa21.38■■□□□ 1.01
Trim7-202ENSMUST00000109213 Nolc1E9Q5C9 702 aaKnown RBP21.37■■□□□ 1.01
Trim7-202ENSMUST00000109213 Atf7ipQ7TT18 1306 aa21.37■■□□□ 1.01
Trim7-202ENSMUST00000109213 Cfap65Q3V0B4 1847 aa21.36■■□□□ 1.01
Trim7-202ENSMUST00000109213 Skint5A7XUY5 1461 aa21.36■■□□□ 1.01
Trim7-202ENSMUST00000109213 Hecw2Q6I6G8 1578 aa21.35■■□□□ 1.01
Trim7-202ENSMUST00000109213 PalldQ9ET54 1408 aa21.35■■□□□ 1.01
Trim7-202ENSMUST00000109213 Erbb3Q61526 1339 aa21.35■■□□□ 1.01
Trim7-202ENSMUST00000109213 Wdr43Q6ZQL4 677 aaKnown RBP21.34■■□□□ 1.01
Trim7-202ENSMUST00000109213 Slc52a2Q9D8F3 450 aa21.34■■□□□ 1.01
Trim7-202ENSMUST00000109213 Myom1Q62234 1667 aaKnown RBP21.34■■□□□ 1.01
Trim7-202ENSMUST00000109213 Lrrc7Q80TE7 1490 aa21.34■■□□□ 1.01
Trim7-202ENSMUST00000109213 Ift172Q6VH22 1749 aa21.34■■□□□ 1.01
Trim7-202ENSMUST00000109213 Kif7B7ZNG0 1348 aa21.33■■□□□ 1.01
Trim7-202ENSMUST00000109213 Gprasp1Q5U4C1 1347 aa21.32■■□□□ 1
Trim7-202ENSMUST00000109213 Esx1O88933 382 aa21.32■■□□□ 1
Trim7-202ENSMUST00000109213 Ppp1r18Q8BQ30 594 aa21.31■■□□□ 1
Trim7-202ENSMUST00000109213 MaddQ80U28 1577 aa21.31■■□□□ 1
Trim7-202ENSMUST00000109213 Ppp4r2Q0VGB7 417 aa21.31■■□□□ 1
Trim7-202ENSMUST00000109213 Stag3O70576 1240 aa21.3■■□□□ 1
Trim7-202ENSMUST00000109213 Dcaf11Q91VU6 549 aa21.3■■□□□ 1
Trim7-202ENSMUST00000109213 Upf2A2AT37 1269 aaKnown RBP21.29■■□□□ 1
Trim7-202ENSMUST00000109213 Ahdc1Q6PAL7 1594 aaKnown RBP21.28■■□□□ 1
Trim7-202ENSMUST00000109213 InsrP15208 1372 aa21.27■■□□□ 1
Trim7-202ENSMUST00000109213 Rad21Q61550 635 aaKnown RBP21.27■■□□□ 1
Trim7-202ENSMUST00000109213 Hfm1D3Z4R1 1434 aa21.27■■□□□ 1
Trim7-202ENSMUST00000109213 IqubQ8CDK3 788 aa21.26■□□□□ 0.99
Trim7-202ENSMUST00000109213 Prrc2bQ7TPM1 1486 aaKnown RBP21.26■□□□□ 0.99
Trim7-202ENSMUST00000109213 Qser1A2BIE1 1698 aa21.25■□□□□ 0.99
Trim7-202ENSMUST00000109213 Kif16bB1AVY7 1312 aa21.23■□□□□ 0.99
Retrieved 100 of 22,080 RNA–protein pairs in 52 ms