RNA–Protein interactions for RNA: ENSMUST00000067005.10

Syne3-201, Transcript of Nesprin-3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Syne3, Length 5,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3-201ENSMUST00000067005 Tpm3-rs7D3Z2H9 248 aa18.22■□□□□ 0.51
Syne3-201ENSMUST00000067005 Gm21190A0A0G2JGJ6 266 aa18.22■□□□□ 0.51
Syne3-201ENSMUST00000067005 Ttll5Q8CHB8 1328 aa18.22■□□□□ 0.51
Syne3-201ENSMUST00000067005 CgnP59242 1191 aa18.22■□□□□ 0.51
Syne3-201ENSMUST00000067005 Gsdma3Q5Y4Y6 464 aa18.22■□□□□ 0.51
Syne3-201ENSMUST00000067005 Rsph3aQ3UFY4 516 aa18.22■□□□□ 0.51
Syne3-201ENSMUST00000067005 Senp3Q9EP97 568 aaKnown RBP18.21■□□□□ 0.51
Syne3-201ENSMUST00000067005 Swt1Q9DBQ9 907 aa18.21■□□□□ 0.51
Syne3-201ENSMUST00000067005 Kif16bB1AVY7 1312 aa18.21■□□□□ 0.51
Syne3-201ENSMUST00000067005 Wdr62Q3U3T8 1523 aa18.21■□□□□ 0.51
Syne3-201ENSMUST00000067005 Slc4a10Q5DTL9 1118 aa18.21■□□□□ 0.51
Syne3-201ENSMUST00000067005 Cald1E9QA15 768 aaKnown RBP18.2■□□□□ 0.5
Syne3-201ENSMUST00000067005 Atp2b2Q9R0K7 1198 aa18.2■□□□□ 0.5
Syne3-201ENSMUST00000067005 Plekhg5Q66T02 1073 aa18.2■□□□□ 0.5
Syne3-201ENSMUST00000067005 Gprasp1Q5U4C1 1347 aa18.2■□□□□ 0.5
Syne3-201ENSMUST00000067005 BicraF8VPZ9 1578 aa18.19■□□□□ 0.5
Syne3-201ENSMUST00000067005 Plekhh1Q80TI1 1356 aa18.19■□□□□ 0.5
Syne3-201ENSMUST00000067005 Prkrip1Q9CWV6 186 aaKnown RBP18.18■□□□□ 0.5
Syne3-201ENSMUST00000067005 Chmp7Q8R1T1 451 aa18.18■□□□□ 0.5
Syne3-201ENSMUST00000067005 Rab3gap2Q8BMG7 1366 aa18.18■□□□□ 0.5
Syne3-201ENSMUST00000067005 Fyb1O35601 819 aa18.18■□□□□ 0.5
Syne3-201ENSMUST00000067005 Plb1Q3TTY0 1478 aa18.17■□□□□ 0.5
Syne3-201ENSMUST00000067005 Glipr1l2Q9CQ35 332 aa18.16■□□□□ 0.5
Syne3-201ENSMUST00000067005 St18Q80TY4 1045 aa18.16■□□□□ 0.5
Syne3-201ENSMUST00000067005 Q8BT18 775 aa18.16■□□□□ 0.5
Syne3-201ENSMUST00000067005 Mre11Q61216 706 aa18.15■□□□□ 0.5
Syne3-201ENSMUST00000067005 Tceal9Q9DD24 104 aa18.15■□□□□ 0.5
Syne3-201ENSMUST00000067005 Lamc3Q9R0B6 1581 aa18.15■□□□□ 0.5
Syne3-201ENSMUST00000067005 Q9D9H8 365 aa18.15■□□□□ 0.5
Syne3-201ENSMUST00000067005 Cetn4Q8K4K1 168 aa18.14■□□□□ 0.49
Syne3-201ENSMUST00000067005 Filip1lQ6P6L0 1131 aa18.14■□□□□ 0.49
Syne3-201ENSMUST00000067005 Ppp2r1aQ76MZ3 589 aa18.14■□□□□ 0.49
Syne3-201ENSMUST00000067005 Usp16Q99LG0 825 aa18.14■□□□□ 0.49
Syne3-201ENSMUST00000067005 Ccdc47Q9D024 483 aaKnown RBP18.14■□□□□ 0.49
Syne3-201ENSMUST00000067005 Ccdc171E9Q1U1 1324 aa18.14■□□□□ 0.49
Syne3-201ENSMUST00000067005 ChgaP26339 463 aaKnown RBP18.13■□□□□ 0.49
Syne3-201ENSMUST00000067005 SynmQ70IV5 1561 aa18.13■□□□□ 0.49
Syne3-201ENSMUST00000067005 TchhA0A0B4J1F9 1599 aa18.13■□□□□ 0.49
Syne3-201ENSMUST00000067005 Calcoco2A2A6M5 331 aa18.12■□□□□ 0.49
Syne3-201ENSMUST00000067005 Crocc2F6XLV1 1638 aa18.12■□□□□ 0.49
Syne3-201ENSMUST00000067005 Igf1rQ60751 1373 aa18.12■□□□□ 0.49
Syne3-201ENSMUST00000067005 Znf710Q3U288 666 aa18.11■□□□□ 0.49
Syne3-201ENSMUST00000067005 Rbm25B2RY56 838 aaKnown RBP18.11■□□□□ 0.49
Syne3-201ENSMUST00000067005 Ric3Q8BPM6 367 aa18.11■□□□□ 0.49
Syne3-201ENSMUST00000067005 Cspp1B2RX88 1205 aa18.11■□□□□ 0.49
Syne3-201ENSMUST00000067005 Mug1P28665 1476 aa18.1■□□□□ 0.49
Syne3-201ENSMUST00000067005 Dhx9O70133 1380 aaKnown RBP18.1■□□□□ 0.49
Syne3-201ENSMUST00000067005 RdxP26043 583 aaKnown RBP18.1■□□□□ 0.49
Syne3-201ENSMUST00000067005 Cavin4A2AMM0 362 aa18.1■□□□□ 0.49
Syne3-201ENSMUST00000067005 Casq1O09165 405 aa18.09■□□□□ 0.49
Syne3-201ENSMUST00000067005 Triml2E9PW10 424 aa18.09■□□□□ 0.49
Syne3-201ENSMUST00000067005 Naip2Q9QUK4 1447 aa18.08■□□□□ 0.48
Syne3-201ENSMUST00000067005 Slc4a2P13808 1237 aaKnown RBP18.07■□□□□ 0.48
Syne3-201ENSMUST00000067005 MsnP26041 577 aaKnown RBP18.07■□□□□ 0.48
Syne3-201ENSMUST00000067005 KinQ8K339 391 aa18.07■□□□□ 0.48
Syne3-201ENSMUST00000067005 Ak7Q9D2H2 614 aa18.07■□□□□ 0.48
Syne3-201ENSMUST00000067005 Ccer1Q9CQL2 403 aa18.07■□□□□ 0.48
Syne3-201ENSMUST00000067005 Rabep1O35551 862 aa18.07■□□□□ 0.48
Syne3-201ENSMUST00000067005 CrebrfQ8CDG5 640 aaKnown RBP18.07■□□□□ 0.48
Syne3-201ENSMUST00000067005 Magi1Q6RHR9 1471 aa18.07■□□□□ 0.48
Syne3-201ENSMUST00000067005 TatQ8QZR1 454 aa18.07■□□□□ 0.48
Syne3-201ENSMUST00000067005 Slc52a2Q9D8F3 450 aa18.06■□□□□ 0.48
Syne3-201ENSMUST00000067005 AppP12023 770 aa18.06■□□□□ 0.48
Syne3-201ENSMUST00000067005 Mcm2P97310 904 aa18.05■□□□□ 0.48
Syne3-201ENSMUST00000067005 Rrp12Q6P5B0 1295 aaKnown RBP18.05■□□□□ 0.48
Syne3-201ENSMUST00000067005 Ddrgk1Q80WW9 315 aa18.05■□□□□ 0.48
Syne3-201ENSMUST00000067005 Cplx2P84086 134 aa18.05■□□□□ 0.48
Syne3-201ENSMUST00000067005 Q7TT23 1179 aa18.05■□□□□ 0.48
Syne3-201ENSMUST00000067005 Rfx7F8VPJ6 1459 aa18.04■□□□□ 0.48
Syne3-201ENSMUST00000067005 Rnf20Q5DTM8 973 aa18.04■□□□□ 0.48
Syne3-201ENSMUST00000067005 NexmifQ5DTT1 1515 aa18.04■□□□□ 0.48
Syne3-201ENSMUST00000067005 Nap1l3Q794H2 544 aa18.03■□□□□ 0.48
Syne3-201ENSMUST00000067005 Cc2d1aQ8K1A6 943 aa18.03■□□□□ 0.48
Syne3-201ENSMUST00000067005 Erc2Q6PH08 957 aa18.03■□□□□ 0.48
Syne3-201ENSMUST00000067005 HypkQ9CR41 129 aa18.03■□□□□ 0.48
Syne3-201ENSMUST00000067005 PhaxQ9JJT9 385 aaKnown RBP18.03■□□□□ 0.48
Syne3-201ENSMUST00000067005 Pcf11G3X9Z4 1553 aa18.03■□□□□ 0.48
Syne3-201ENSMUST00000067005 Caskin1Q6P9K8 1431 aa18.02■□□□□ 0.48
Syne3-201ENSMUST00000067005 Bcl11aQ9QYE3 773 aa18.02■□□□□ 0.48
Syne3-201ENSMUST00000067005 Mlh3A0A1Y7VMP7 1443 aa18.02■□□□□ 0.48
Syne3-201ENSMUST00000067005 Sv2bQ8BG39 683 aa18.02■□□□□ 0.48
Syne3-201ENSMUST00000067005 Ddx11Q6AXC6 880 aa18.02■□□□□ 0.47
Syne3-201ENSMUST00000067005 Zfp444Q3TDV8 331 aaKnown RBP18.02■□□□□ 0.47
Syne3-201ENSMUST00000067005 Pank1Q8K4K6 548 aa18.02■□□□□ 0.47
Syne3-201ENSMUST00000067005 A2mQ6GQT1 1474 aa18.01■□□□□ 0.47
Syne3-201ENSMUST00000067005 Srek1Q8BZX4 494 aaKnown RBP18.01■□□□□ 0.47
Syne3-201ENSMUST00000067005 Sf3a1Q8K4Z5 791 aaKnown RBP18.01■□□□□ 0.47
Syne3-201ENSMUST00000067005 Atf3Q60765 181 aa18.01■□□□□ 0.47
Syne3-201ENSMUST00000067005 Evc2Q8K1G2 1220 aa18■□□□□ 0.47
Syne3-201ENSMUST00000067005 Abcc5Q9R1X5 1436 aa17.99■□□□□ 0.47
Syne3-201ENSMUST00000067005 SlkO54988 1233 aa17.99■□□□□ 0.47
Syne3-201ENSMUST00000067005 DroshaQ5HZJ0 1373 aaKnown RBP17.98■□□□□ 0.47
Syne3-201ENSMUST00000067005 Asxl1P59598 1514 aa17.98■□□□□ 0.47
Syne3-201ENSMUST00000067005 Hoxa7P02830 229 aa17.98■□□□□ 0.47
Syne3-201ENSMUST00000067005 Tpd52l1O54818 204 aa17.98■□□□□ 0.47
Syne3-201ENSMUST00000067005 Gnl3lQ6PGG6 577 aaKnown RBP17.98■□□□□ 0.47
Syne3-201ENSMUST00000067005 Grin2aP35436 1464 aa17.98■□□□□ 0.47
Syne3-201ENSMUST00000067005 NexnQ7TPW1 607 aa17.98■□□□□ 0.47
Syne3-201ENSMUST00000067005 SkilQ60665 675 aa17.98■□□□□ 0.47
Syne3-201ENSMUST00000067005 Q9D2X8 372 aa17.97■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms