RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 PhaxQ9JJT9 385 aaKnown RBP18.02■□□□□ 0.48
Pcdh20-201ENSMUST00000061628 MlecQ6ZQI3 291 aaKnown RBP18.02■□□□□ 0.48
Pcdh20-201ENSMUST00000061628 Tpm4Q6IRU2 248 aa18.02■□□□□ 0.47
Pcdh20-201ENSMUST00000061628 Gsdma3Q5Y4Y6 464 aa18.01■□□□□ 0.47
Pcdh20-201ENSMUST00000061628 Efcab5A0JP43 1406 aa18.01■□□□□ 0.47
Pcdh20-201ENSMUST00000061628 PnisrA2AJT4 805 aaKnown RBP18.01■□□□□ 0.47
Pcdh20-201ENSMUST00000061628 Esx1O88933 382 aa18.01■□□□□ 0.47
Pcdh20-201ENSMUST00000061628 Prkrip1Q9CWV6 186 aaKnown RBP18.01■□□□□ 0.47
Pcdh20-201ENSMUST00000061628 Soga1E1U8D0 1418 aa18.01■□□□□ 0.47
Pcdh20-201ENSMUST00000061628 Chmp7Q8R1T1 451 aa18■□□□□ 0.47
Pcdh20-201ENSMUST00000061628 Mink1Q9JM52 1308 aa18■□□□□ 0.47
Pcdh20-201ENSMUST00000061628 Senp3Q9EP97 568 aaKnown RBP18■□□□□ 0.47
Pcdh20-201ENSMUST00000061628 Ak7Q9D2H2 614 aa17.99■□□□□ 0.47
Pcdh20-201ENSMUST00000061628 FanciQ8K368 1330 aa17.99■□□□□ 0.47
Pcdh20-201ENSMUST00000061628 Gpatch11Q3UFS4 262 aa17.99■□□□□ 0.47
Pcdh20-201ENSMUST00000061628 Ccdc30Q8BVF4 654 aa17.99■□□□□ 0.47
Pcdh20-201ENSMUST00000061628 AppP12023 770 aa17.98■□□□□ 0.47
Pcdh20-201ENSMUST00000061628 Kif4P33174 1231 aa17.98■□□□□ 0.47
Pcdh20-201ENSMUST00000061628 Kif3aP28741 701 aa17.98■□□□□ 0.47
Pcdh20-201ENSMUST00000061628 Gsto1O09131 240 aa17.97■□□□□ 0.47
Pcdh20-201ENSMUST00000061628 Swt1Q9DBQ9 907 aa17.97■□□□□ 0.47
Pcdh20-201ENSMUST00000061628 Erc2Q6PH08 957 aa17.97■□□□□ 0.47
Pcdh20-201ENSMUST00000061628 Mcm2P97310 904 aa17.97■□□□□ 0.47
Pcdh20-201ENSMUST00000061628 Gtf3c3Q3TMP1 882 aa17.96■□□□□ 0.47
Pcdh20-201ENSMUST00000061628 Gripap1Q8VD04 806 aa17.96■□□□□ 0.47
Pcdh20-201ENSMUST00000061628 Plekhh1Q80TI1 1356 aa17.96■□□□□ 0.47
Pcdh20-201ENSMUST00000061628 Triml2E9PW10 424 aa17.96■□□□□ 0.47
Pcdh20-201ENSMUST00000061628 Hook1Q8BIL5 728 aa17.96■□□□□ 0.47
Pcdh20-201ENSMUST00000061628 Top2aQ01320 1528 aaKnown RBP17.95■□□□□ 0.46
Pcdh20-201ENSMUST00000061628 Cchcr1Q8K2I2 770 aa17.95■□□□□ 0.46
Pcdh20-201ENSMUST00000061628 Hmgn5Q9JL35 406 aa17.95■□□□□ 0.46
Pcdh20-201ENSMUST00000061628 Shroom4Q1W617 1475 aa17.95■□□□□ 0.46
Pcdh20-201ENSMUST00000061628 Ccdc171E9Q1U1 1324 aa17.94■□□□□ 0.46
Pcdh20-201ENSMUST00000061628 Kri1Q8VDQ9 704 aaKnown RBP17.94■□□□□ 0.46
Pcdh20-201ENSMUST00000061628 Ric3Q8BPM6 367 aa17.94■□□□□ 0.46
Pcdh20-201ENSMUST00000061628 Gm21190A0A0G2JGJ6 266 aa17.94■□□□□ 0.46
Pcdh20-201ENSMUST00000061628 Ccdc173A0JLY1 547 aa17.94■□□□□ 0.46
Pcdh20-201ENSMUST00000061628 Pabpn1Q8CCS6 302 aaKnown RBP17.93■□□□□ 0.46
Pcdh20-201ENSMUST00000061628 Usp16Q99LG0 825 aa17.93■□□□□ 0.46
Pcdh20-201ENSMUST00000061628 Smc3Q9CW03 1217 aaKnown RBP17.93■□□□□ 0.46
Pcdh20-201ENSMUST00000061628 Gabpb2P81069 414 aa17.92■□□□□ 0.46
Pcdh20-201ENSMUST00000061628 Utp3Q9JI13 469 aaKnown RBP17.92■□□□□ 0.46
Pcdh20-201ENSMUST00000061628 Ift140E9PY46 1464 aa17.92■□□□□ 0.46
Pcdh20-201ENSMUST00000061628 Cplx1P63040 134 aa17.92■□□□□ 0.46
Pcdh20-201ENSMUST00000061628 Ccdc34Q3UI66 367 aa17.92■□□□□ 0.46
Pcdh20-201ENSMUST00000061628 Rfx1P48377 963 aa17.91■□□□□ 0.46
Pcdh20-201ENSMUST00000061628 Rec8Q8C5S7 591 aa17.91■□□□□ 0.46
Pcdh20-201ENSMUST00000061628 Krt82Q99M74 516 aa17.91■□□□□ 0.46
Pcdh20-201ENSMUST00000061628 Rpgrip1lQ8CG73 1264 aa17.91■□□□□ 0.46
Pcdh20-201ENSMUST00000061628 Bicd2Q921C5 820 aa17.91■□□□□ 0.46
Pcdh20-201ENSMUST00000061628 Eif2s2Q99L45 331 aaKnown RBP17.9■□□□□ 0.46
Pcdh20-201ENSMUST00000061628 Fyb1O35601 819 aa17.9■□□□□ 0.46
Pcdh20-201ENSMUST00000061628 Hoxa7P02830 229 aa17.9■□□□□ 0.46
Pcdh20-201ENSMUST00000061628 Pde4cQ3UEI1 686 aa17.89■□□□□ 0.46
Pcdh20-201ENSMUST00000061628 Puf60Q3UEB3 564 aaKnown RBP17.89■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 NexnQ7TPW1 607 aa17.89■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 Cc2d1aQ8K1A6 943 aa17.89■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 Q9D2X8 372 aa17.89■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 Rbm25B2RY56 838 aaKnown RBP17.89■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 Odf2A3KGV1 830 aaKnown RBP17.88■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 Vps53Q8CCB4 832 aa17.88■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 Taf3Q5HZG4 932 aa17.88■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 Iqgap2Q3UQ44 1575 aa17.87■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 Ftsj3Q9DBE9 838 aaKnown RBP17.87■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 EzrP26040 586 aaKnown RBP17.87■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 Q8C5K5 320 aa17.87■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 UvssaQ9D479 717 aa17.87■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 Ccdc183A2AJB1 534 aa17.86■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 Hap1O35668 628 aa17.86■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 Gpatch3Q8BIY1 525 aa17.86■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 Mical1Q8VDP3 1048 aa17.86■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 Phactr2B1AVP0 632 aa17.85■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 Gnl3lQ6PGG6 577 aaKnown RBP17.85■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 Psma5Q9Z2U1 241 aaKnown RBP17.85■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 1700010I14RikQ7TPG0 532 aa17.84■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 Ubxn4Q8VCH8 506 aa17.84■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 NaspQ99MD9 773 aaKnown RBP17.84■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 Isy1Q69ZQ2 285 aaKnown RBP17.84■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 Rab3gap2Q8BMG7 1366 aa17.84■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 Ints3Q7TPD0 1041 aaKnown RBP17.84■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 Ttll5Q8CHB8 1328 aa17.84■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 CrcpO35427 148 aa17.84■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 SkilQ60665 675 aa17.83■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 Sv2bQ8BG39 683 aa17.83■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 Cyp46a1Q9WVK8 500 aa17.83■□□□□ 0.45
Pcdh20-201ENSMUST00000061628 BccipQ9CWI3 316 aa17.83■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 Tomm22Q9CPQ3 142 aa17.82■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 Cavin4A2AMM0 362 aa17.82■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 Dhx16G3X8X0 1044 aaKnown RBP17.82■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 Zrsr2Q62377 462 aaKnown RBP17.82■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 Zkscan2G3X952 960 aa17.82■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 Myom3A2ABU4 1439 aa17.82■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 Cfap99A0A140LIX9 648 aa17.81■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 Trim29Q8R2Q0 587 aa17.81■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 Cfdp1O88271 295 aaKnown RBP17.81■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 Atp2b2Q9R0K7 1198 aa17.8■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 Cd109Q8R422 1442 aa17.8■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 NrkQ9R0G8 1455 aa17.8■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 Ppp2r3aB2RXC8 1150 aa17.8■□□□□ 0.44
Pcdh20-201ENSMUST00000061628 Naip1Q9QWK5 1403 aa17.8■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 8.9 ms