RNA–Protein interactions for RNA: ENSMUST00000039562.7

Trim13-201, Transcript of E3 ubiquitin-protein ligase TRIM13, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim13, Length 1,550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13-201ENSMUST00000039562 Itsn1Q9Z0R4 1714 aa12.99□□□□□ -0.33
Trim13-201ENSMUST00000039562 Las1lA2BE28 776 aaKnown RBP12.98□□□□□ -0.33
Trim13-201ENSMUST00000039562 Myom1Q62234 1667 aaKnown RBP12.98□□□□□ -0.33
Trim13-201ENSMUST00000039562 Cep152A2AUM9 1736 aaKnown RBP12.98□□□□□ -0.33
Trim13-201ENSMUST00000039562 Chd2E9PZM4 1827 aaKnown RBP12.97□□□□□ -0.33
Trim13-201ENSMUST00000039562 Med14A2ABV5 1459 aaKnown RBP12.97□□□□□ -0.33
Trim13-201ENSMUST00000039562 Mroh1E0CZ22 1640 aa12.97□□□□□ -0.33
Trim13-201ENSMUST00000039562 Tulp4Q9JIL5 1547 aa12.97□□□□□ -0.33
Trim13-201ENSMUST00000039562 Adamts13Q769J6 1426 aa12.97□□□□□ -0.33
Trim13-201ENSMUST00000039562 Plxnc1Q9QZC2 1574 aa12.96□□□□□ -0.33
Trim13-201ENSMUST00000039562 Washc2Q6PGL7 1334 aa12.96□□□□□ -0.33
Trim13-201ENSMUST00000039562 ErbinQ80TH2 1402 aa12.96□□□□□ -0.34
Trim13-201ENSMUST00000039562 Dip2aQ8BWT5 1523 aa12.95□□□□□ -0.34
Trim13-201ENSMUST00000039562 Hdac5Q9Z2V6 1113 aa12.95□□□□□ -0.34
Trim13-201ENSMUST00000039562 Skint5A7XUY5 1461 aa12.95□□□□□ -0.34
Trim13-201ENSMUST00000039562 Zc3h13E9Q784 1729 aaKnown RBP12.94□□□□□ -0.34
Trim13-201ENSMUST00000039562 Cdk5rap2Q8K389 1822 aa12.94□□□□□ -0.34
Trim13-201ENSMUST00000039562 Cdk13Q69ZA1 1511 aaKnown RBP12.93□□□□□ -0.34
Trim13-201ENSMUST00000039562 Erich6D3Z6S9 713 aa12.93□□□□□ -0.34
Trim13-201ENSMUST00000039562 Hspa1lP16627 641 aa12.93□□□□□ -0.34
Trim13-201ENSMUST00000039562 Rgl3Q3UYI5 709 aa12.93□□□□□ -0.34
Trim13-201ENSMUST00000039562 Sipa1l1Q8C0T5 1782 aa12.93□□□□□ -0.34
Trim13-201ENSMUST00000039562 Mug2P28666 1451 aa12.92□□□□□ -0.34
Trim13-201ENSMUST00000039562 Cpsf1Q9EPU4 1441 aaKnown RBP12.92□□□□□ -0.34
Trim13-201ENSMUST00000039562 Sall3Q62255 1320 aa12.91□□□□□ -0.34
Trim13-201ENSMUST00000039562 Rims1Q99NE5 1463 aa12.9□□□□□ -0.34
Trim13-201ENSMUST00000039562 PplQ9R269 1755 aa12.9□□□□□ -0.34
Trim13-201ENSMUST00000039562 Topaz1E5FYH1 1653 aa12.9□□□□□ -0.34
Trim13-201ENSMUST00000039562 AatkQ80YE4 1365 aa12.9□□□□□ -0.34
Trim13-201ENSMUST00000039562 Polr3aB2RXC6 1390 aa12.89□□□□□ -0.35
Trim13-201ENSMUST00000039562 4930407I10RikD3Z5T8 1512 aa12.87□□□□□ -0.35
Trim13-201ENSMUST00000039562 Ltbp4Q8K4G1 1666 aa12.87□□□□□ -0.35
Trim13-201ENSMUST00000039562 Eif2ak4Q9QZ05 1648 aa12.87□□□□□ -0.35
Trim13-201ENSMUST00000039562 Ppargc1bQ8VHJ7 1014 aa12.86□□□□□ -0.35
Trim13-201ENSMUST00000039562 Stk24Q99KH8 431 aa12.86□□□□□ -0.35
Trim13-201ENSMUST00000039562 Arhgef28P97433 1693 aa12.86□□□□□ -0.35
Trim13-201ENSMUST00000039562 Setd1aE9PYH6 1716 aa12.86□□□□□ -0.35
Trim13-201ENSMUST00000039562 Naip7Q9JIB3 1402 aa12.86□□□□□ -0.35
Trim13-201ENSMUST00000039562 Myo3aQ8K3H5 1613 aa12.86□□□□□ -0.35
Trim13-201ENSMUST00000039562 RalgapbQ8BQZ4 1484 aa12.85□□□□□ -0.35
Trim13-201ENSMUST00000039562 Ift172Q6VH22 1749 aa12.85□□□□□ -0.35
Trim13-201ENSMUST00000039562 Bcl9Q9D219 1425 aa12.85□□□□□ -0.35
Trim13-201ENSMUST00000039562 Mroh3A0A1D5RM54 893 aa12.85□□□□□ -0.35
Trim13-201ENSMUST00000039562 Gemin5Q8BX17 1502 aaKnown RBP12.83□□□□□ -0.36
Trim13-201ENSMUST00000039562 MaddQ80U28 1577 aa12.83□□□□□ -0.36
Trim13-201ENSMUST00000039562 Prrc2bQ7TPM1 1486 aaKnown RBP12.83□□□□□ -0.36
Trim13-201ENSMUST00000039562 Neurod1Q60867 357 aa12.82□□□□□ -0.36
Trim13-201ENSMUST00000039562 Dapk1Q80YE7 1442 aa12.82□□□□□ -0.36
Trim13-201ENSMUST00000039562 Grwd1Q810D6 446 aaKnown RBP12.81□□□□□ -0.36
Trim13-201ENSMUST00000039562 Gm13697A2AK42 830 aa12.81□□□□□ -0.36
Trim13-201ENSMUST00000039562 Ifit1bl1D3Z6F0 470 aa12.8□□□□□ -0.36
Trim13-201ENSMUST00000039562 Ncoa1P70365 1447 aa12.8□□□□□ -0.36
Trim13-201ENSMUST00000039562 DnmbpQ6TXD4 1580 aa12.79□□□□□ -0.36
Trim13-201ENSMUST00000039562 Aebp2Q9Z248 504 aaKnown RBP12.79□□□□□ -0.36
Trim13-201ENSMUST00000039562 Iqsec2Q5DU25 1478 aa12.78□□□□□ -0.36
Trim13-201ENSMUST00000039562 AU022751B1B0V2 589 aa12.77□□□□□ -0.36
Trim13-201ENSMUST00000039562 Itsn2Q9Z0R6 1659 aa12.77□□□□□ -0.36
Trim13-201ENSMUST00000039562 Phlpp1Q8CHE4 1687 aa12.77□□□□□ -0.37
Trim13-201ENSMUST00000039562 Rimbp3Q3V0F0 1606 aa12.75□□□□□ -0.37
Trim13-201ENSMUST00000039562 Pola1P33609 1465 aa12.74□□□□□ -0.37
Trim13-201ENSMUST00000039562 Gli3Q61602 1583 aa12.74□□□□□ -0.37
Trim13-201ENSMUST00000039562 Lrrc7Q80TE7 1490 aa12.74□□□□□ -0.37
Trim13-201ENSMUST00000039562 Rundc1Q0VDN7 615 aa12.73□□□□□ -0.37
Trim13-201ENSMUST00000039562 Bcl11bQ99PV8 884 aa12.73□□□□□ -0.37
Trim13-201ENSMUST00000039562 Slit3Q9WVB4 1523 aa12.73□□□□□ -0.37
Trim13-201ENSMUST00000039562 Card11Q8CIS0 1159 aa12.72□□□□□ -0.37
Trim13-201ENSMUST00000039562 Lmtk3Q5XJV6 1424 aa12.71□□□□□ -0.37
Trim13-201ENSMUST00000039562 Wdr66E9Q743 1299 aa12.71□□□□□ -0.37
Trim13-201ENSMUST00000039562 Tubgcp6G5E8P0 1769 aa12.71□□□□□ -0.38
Trim13-201ENSMUST00000039562 Fbln2P37889 1221 aa12.7□□□□□ -0.38
Trim13-201ENSMUST00000039562 Nphp4P59240 1425 aa12.7□□□□□ -0.38
Trim13-201ENSMUST00000039562 Kdm2aP59997 1161 aa12.69□□□□□ -0.38
Trim13-201ENSMUST00000039562 Srpk2O54781 681 aaKnown RBP12.69□□□□□ -0.38
Trim13-201ENSMUST00000039562 Slc52a2Q9D8F3 450 aa12.69□□□□□ -0.38
Trim13-201ENSMUST00000039562 Arap3Q8R5G7 1538 aa12.68□□□□□ -0.38
Trim13-201ENSMUST00000039562 PalldQ9ET54 1408 aa12.68□□□□□ -0.38
Trim13-201ENSMUST00000039562 ClspnQ80YR7 1315 aa12.68□□□□□ -0.38
Trim13-201ENSMUST00000039562 Abca14E9Q8F8 1683 aa12.68□□□□□ -0.38
Trim13-201ENSMUST00000039562 Rims2Q9EQZ7 1530 aa12.67□□□□□ -0.38
Trim13-201ENSMUST00000039562 Gm20521D3Z5F7 333 aa12.67□□□□□ -0.38
Trim13-201ENSMUST00000039562 Sin3aQ60520 1274 aaKnown RBP12.67□□□□□ -0.38
Trim13-201ENSMUST00000039562 Puf60Q3UEB3 564 aaKnown RBP12.66□□□□□ -0.38
Trim13-201ENSMUST00000039562 Kcna4Q61423 654 aa12.66□□□□□ -0.38
Trim13-201ENSMUST00000039562 Fan1Q69ZT1 1020 aa12.66□□□□□ -0.38
Trim13-201ENSMUST00000039562 Os9Q8K2C7 672 aa12.66□□□□□ -0.38
Trim13-201ENSMUST00000039562 Cps1Q8C196 1500 aa12.66□□□□□ -0.38
Trim13-201ENSMUST00000039562 Rock2P70336 1388 aa12.66□□□□□ -0.38
Trim13-201ENSMUST00000039562 Cep170bQ80U49 1574 aa12.65□□□□□ -0.38
Trim13-201ENSMUST00000039562 Txndc2Q6P902 515 aa12.65□□□□□ -0.38
Trim13-201ENSMUST00000039562 Ildr2B5TVM2 661 aa12.64□□□□□ -0.39
Trim13-201ENSMUST00000039562 GphnQ8BUV3 769 aaKnown RBP12.64□□□□□ -0.39
Trim13-201ENSMUST00000039562 Cwc22Q8C5N3 908 aaKnown RBP12.64□□□□□ -0.39
Trim13-201ENSMUST00000039562 Scaf11E9PZM7 1456 aaKnown RBP12.64□□□□□ -0.39
Trim13-201ENSMUST00000039562 Kif20bQ80WE4 1774 aaKnown RBP12.64□□□□□ -0.39
Trim13-201ENSMUST00000039562 Nwd1A6H603 1563 aa12.64□□□□□ -0.39
Trim13-201ENSMUST00000039562 Med1Q925J9 1575 aa12.64□□□□□ -0.39
Trim13-201ENSMUST00000039562 Thsd7aQ69ZU6 1645 aa12.64□□□□□ -0.39
Trim13-201ENSMUST00000039562 PzpQ61838 1495 aa12.64□□□□□ -0.39
Trim13-201ENSMUST00000039562 Shq1Q7TMX5 569 aa12.64□□□□□ -0.39
Trim13-201ENSMUST00000039562 P3h3Q8CG70 732 aa12.64□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 69.4 ms