RNA–Protein interactions for RNA: ENSMUST00000039562.7

Trim13-201, Transcript of E3 ubiquitin-protein ligase TRIM13, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim13, Length 1,550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13-201ENSMUST00000039562 Gm35339A0A140LHH9 1649 aa19.8■□□□□ 0.76
Trim13-201ENSMUST00000039562 NischQ80TM9 1593 aa19.56■□□□□ 0.72
Trim13-201ENSMUST00000039562 Mapk8ip2Q9ERE9 830 aa19.52■□□□□ 0.71
Trim13-201ENSMUST00000039562 Abcc9P70170 1546 aa19.03■□□□□ 0.64
Trim13-201ENSMUST00000039562 Abcc8B2RUS7 1588 aa18.79■□□□□ 0.6
Trim13-201ENSMUST00000039562 Chic1Q8CBW7 227 aa18.68■□□□□ 0.58
Trim13-201ENSMUST00000039562 ScribQ80U72 1612 aa17.98■□□□□ 0.47
Trim13-201ENSMUST00000039562 Dcaf1Q80TR8 1506 aa17.45■□□□□ 0.38
Trim13-201ENSMUST00000039562 Kdm5dQ62240 1548 aa17.41■□□□□ 0.38
Trim13-201ENSMUST00000039562 NacadQ5SWP3 1504 aa17.35■□□□□ 0.37
Trim13-201ENSMUST00000039562 Dnajc5bQ9CQ94 199 aa17.31■□□□□ 0.36
Trim13-201ENSMUST00000039562 Rb1cc1Q9ESK9 1588 aa17.12■□□□□ 0.33
Trim13-201ENSMUST00000039562 Ccdc180J3QNE4 1664 aa17.1■□□□□ 0.33
Trim13-201ENSMUST00000039562 Rhox8Q6VSS7 320 aa17.1■□□□□ 0.33
Trim13-201ENSMUST00000039562 Sycp2Q9CUU3 1500 aa17■□□□□ 0.31
Trim13-201ENSMUST00000039562 Baz1aO88379 1555 aa16.9■□□□□ 0.3
Trim13-201ENSMUST00000039562 BicraF8VPZ9 1578 aa16.75■□□□□ 0.27
Trim13-201ENSMUST00000039562 Rtl1Q7M732 1744 aa16.75■□□□□ 0.27
Trim13-201ENSMUST00000039562 Crybg2B7ZCC2 1516 aa16.73■□□□□ 0.27
Trim13-201ENSMUST00000039562 Phf23Q8BSN5 401 aa16.5■□□□□ 0.23
Trim13-201ENSMUST00000039562 Zcchc6Q5BLK4 1491 aaKnown RBP16.48■□□□□ 0.23
Trim13-201ENSMUST00000039562 Smarca2Q6DIC0 1577 aa16.48■□□□□ 0.23
Trim13-201ENSMUST00000039562 Dnajc5P60904 198 aa16.29■□□□□ 0.2
Trim13-201ENSMUST00000039562 Thoc2B1AZI6 1594 aaKnown RBP16.26■□□□□ 0.19
Trim13-201ENSMUST00000039562 Cecr2E9Q2Z1 1453 aa16.16■□□□□ 0.18
Trim13-201ENSMUST00000039562 Smarca4Q3TKT4 1613 aaKnown RBP16.14■□□□□ 0.17
Trim13-201ENSMUST00000039562 Pds5bQ4VA53 1446 aaKnown RBP16.08■□□□□ 0.16
Trim13-201ENSMUST00000039562 Atad2bE9Q166 1460 aaKnown RBP16.04■□□□□ 0.16
Trim13-201ENSMUST00000039562 Cc2d2aQ8CFW7 1633 aa16.01■□□□□ 0.15
Trim13-201ENSMUST00000039562 Iqgap2Q3UQ44 1575 aa16■□□□□ 0.15
Trim13-201ENSMUST00000039562 Cttnbp2B9EJA2 1648 aa15.96■□□□□ 0.14
Trim13-201ENSMUST00000039562 Trim41Q5NCC3 630 aa15.95■□□□□ 0.14
Trim13-201ENSMUST00000039562 Synj1Q8CHC4 1574 aa15.94■□□□□ 0.14
Trim13-201ENSMUST00000039562 Ccdc136Q3TVA9 1136 aa15.92■□□□□ 0.14
Trim13-201ENSMUST00000039562 Brd4Q9ESU6 1400 aaKnown RBP15.92■□□□□ 0.14
Trim13-201ENSMUST00000039562 CftrP26361 1476 aa15.87■□□□□ 0.13
Trim13-201ENSMUST00000039562 Wdr62Q3U3T8 1523 aa15.79■□□□□ 0.12
Trim13-201ENSMUST00000039562 Ercc6F8VPZ5 1481 aa15.79■□□□□ 0.12
Trim13-201ENSMUST00000039562 Unc13aQ4KUS2 1712 aa15.75■□□□□ 0.11
Trim13-201ENSMUST00000039562 Frmpd1A2AKB4 1549 aa15.72■□□□□ 0.11
Trim13-201ENSMUST00000039562 Fam135aQ6NS59 1506 aa15.68■□□□□ 0.1
Trim13-201ENSMUST00000039562 Top2bQ64511 1612 aa15.59■□□□□ 0.09
Trim13-201ENSMUST00000039562 Golga3P55937 1487 aa15.53■□□□□ 0.08
Trim13-201ENSMUST00000039562 Gab3Q8BSM5 595 aa15.52■□□□□ 0.07
Trim13-201ENSMUST00000039562 Phldb1Q6PDH0 1371 aaKnown RBP15.46■□□□□ 0.07
Trim13-201ENSMUST00000039562 Esf1Q3V1V3 845 aaKnown RBP15.45■□□□□ 0.06
Trim13-201ENSMUST00000039562 Baz1bQ9Z277 1479 aa15.42■□□□□ 0.06
Trim13-201ENSMUST00000039562 Ubl4bQ9CQ84 188 aa15.38■□□□□ 0.05
Trim13-201ENSMUST00000039562 TnnQ80Z71 1560 aa15.38■□□□□ 0.05
Trim13-201ENSMUST00000039562 Lamc3Q9R0B6 1581 aa15.37■□□□□ 0.05
Trim13-201ENSMUST00000039562 Mrc2Q64449 1479 aa15.34■□□□□ 0.05
Trim13-201ENSMUST00000039562 Cngb1E1AZ71 1325 aa15.33■□□□□ 0.04
Trim13-201ENSMUST00000039562 Rsf1E9PWW9 1441 aaKnown RBP15.3■□□□□ 0.04
Trim13-201ENSMUST00000039562 Fmn1Q05860 1466 aa15.28■□□□□ 0.04
Trim13-201ENSMUST00000039562 Kif15Q6P9L6 1387 aa15.22■□□□□ 0.03
Trim13-201ENSMUST00000039562 Ccdc88bQ4QRL3 1481 aa15.21■□□□□ 0.03
Trim13-201ENSMUST00000039562 HrcG5E8J6 738 aa15.19■□□□□ 0.02
Trim13-201ENSMUST00000039562 Camsap1A2AHC3 1581 aa15.16■□□□□ 0.02
Trim13-201ENSMUST00000039562 Lrriq1Q0P5X1 1673 aa15.14■□□□□ 0.01
Trim13-201ENSMUST00000039562 Cux2P70298 1426 aa15.13■□□□□ 0.01
Trim13-201ENSMUST00000039562 Top2aQ01320 1528 aaKnown RBP15.13■□□□□ 0.01
Trim13-201ENSMUST00000039562 Cep164Q5DU05 1446 aa15.09■□□□□ 0.01
Trim13-201ENSMUST00000039562 Col17a1Q07563 1470 aa15.09■□□□□ 0.01
Trim13-201ENSMUST00000039562 Kif21aQ9QXL2 1672 aa15.08■□□□□ 0.01
Trim13-201ENSMUST00000039562 Shroom2A2ALU4 1481 aa15.07■□□□□ 0
Trim13-201ENSMUST00000039562 Fam163aQ8CAA5 168 aa15.05■□□□□ -0
Trim13-201ENSMUST00000039562 Ccdc18Q640L5 1455 aa15.04■□□□□ -0
Trim13-201ENSMUST00000039562 Plppr3Q7TPB0 716 aa14.98□□□□□ -0.01
Trim13-201ENSMUST00000039562 Grin2bQ01097 1482 aa14.93□□□□□ -0.02
Trim13-201ENSMUST00000039562 Pcdh10E9PXQ7 1057 aa14.91□□□□□ -0.02
Trim13-201ENSMUST00000039562 Npm1Q61937 292 aaKnown RBP14.9□□□□□ -0.02
Trim13-201ENSMUST00000039562 Crocc2F6XLV1 1638 aa14.89□□□□□ -0.03
Trim13-201ENSMUST00000039562 LrpprcQ6PB66 1392 aaKnown RBP14.88□□□□□ -0.03
Trim13-201ENSMUST00000039562 Il27Q8K3I6 234 aa14.87□□□□□ -0.03
Trim13-201ENSMUST00000039562 PogzQ8BZH4 1409 aaKnown RBP14.87□□□□□ -0.03
Trim13-201ENSMUST00000039562 NrkQ9R0G8 1455 aa14.87□□□□□ -0.03
Trim13-201ENSMUST00000039562 Eif4g3Q80XI3 1579 aaKnown RBP14.85□□□□□ -0.03
Trim13-201ENSMUST00000039562 Dhx29Q6PGC1 1365 aaKnown RBP14.84□□□□□ -0.03
Trim13-201ENSMUST00000039562 Shroom4Q1W617 1475 aa14.83□□□□□ -0.04
Trim13-201ENSMUST00000039562 Pabpn1Q8CCS6 302 aaKnown RBP14.82□□□□□ -0.04
Trim13-201ENSMUST00000039562 Duox2A2AQ99 1517 aa14.81□□□□□ -0.04
Trim13-201ENSMUST00000039562 Eif4g1Q6NZJ6 1600 aaKnown RBP14.79□□□□□ -0.04
Trim13-201ENSMUST00000039562 PtprkP35822 1457 aa14.79□□□□□ -0.04
Trim13-201ENSMUST00000039562 Rapgef2Q8CHG7 1496 aa14.79□□□□□ -0.04
Trim13-201ENSMUST00000039562 Samd9lQ69Z37 1561 aa14.79□□□□□ -0.04
Trim13-201ENSMUST00000039562 Setd1bQ8CFT2 1985 aa14.79□□□□□ -0.04
Trim13-201ENSMUST00000039562 Urb2E9Q7L1 1524 aaKnown RBP14.77□□□□□ -0.05
Trim13-201ENSMUST00000039562 Pelp1Q9DBD5 1123 aaKnown RBP14.77□□□□□ -0.05
Trim13-201ENSMUST00000039562 Efcab5A0JP43 1406 aa14.75□□□□□ -0.05
Trim13-201ENSMUST00000039562 Plb1Q3TTY0 1478 aa14.73□□□□□ -0.05
Trim13-201ENSMUST00000039562 Pbrm1Q8BSQ9 1634 aaKnown RBP14.7□□□□□ -0.06
Trim13-201ENSMUST00000039562 Senp3Q9EP97 568 aaKnown RBP14.68□□□□□ -0.06
Trim13-201ENSMUST00000039562 SynmQ70IV5 1561 aa14.66□□□□□ -0.06
Trim13-201ENSMUST00000039562 Gpatch8A2A6A1 1505 aa14.65□□□□□ -0.06
Trim13-201ENSMUST00000039562 Ift140E9PY46 1464 aa14.65□□□□□ -0.06
Trim13-201ENSMUST00000039562 Cep162Q6ZQ06 1403 aa14.65□□□□□ -0.06
Trim13-201ENSMUST00000039562 Map3k1P53349 1493 aa14.64□□□□□ -0.07
Trim13-201ENSMUST00000039562 Arhgap35Q91YM2 1499 aa14.64□□□□□ -0.07
Trim13-201ENSMUST00000039562 Mroh2bQ7M6Y6 1581 aa14.63□□□□□ -0.07
Trim13-201ENSMUST00000039562 Zcchc11B2RX14 1644 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 55.6 ms