RNA–Protein interactions for RNA: ENSMUST00000038188.13

Limch1-201, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 1 (best) BASIC

Gene Limch1, Length 5,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-201ENSMUST00000038188 Lrriq1Q0P5X1 1673 aa13.5□□□□□ -0.25
Limch1-201ENSMUST00000038188 AppP12023 770 aa13.5□□□□□ -0.25
Limch1-201ENSMUST00000038188 Mug1P28665 1476 aa13.5□□□□□ -0.25
Limch1-201ENSMUST00000038188 Dhx16G3X8X0 1044 aaKnown RBP13.49□□□□□ -0.25
Limch1-201ENSMUST00000038188 Zcwpw1Q6IR42 630 aa13.49□□□□□ -0.25
Limch1-201ENSMUST00000038188 Fam50bQ9WTJ8 334 aa13.49□□□□□ -0.25
Limch1-201ENSMUST00000038188 Fancd2Q80V62 1450 aa13.48□□□□□ -0.25
Limch1-201ENSMUST00000038188 Mlh3A0A1Y7VMP7 1443 aa13.48□□□□□ -0.25
Limch1-201ENSMUST00000038188 Wwc2Q6NXJ0 1187 aa13.48□□□□□ -0.25
Limch1-201ENSMUST00000038188 TkfcQ8VC30 578 aa13.48□□□□□ -0.25
Limch1-201ENSMUST00000038188 Sall2Q9QX96 1004 aa13.47□□□□□ -0.25
Limch1-201ENSMUST00000038188 Ppm1gQ61074 542 aa13.47□□□□□ -0.25
Limch1-201ENSMUST00000038188 Klc3Q91W40 508 aa13.47□□□□□ -0.25
Limch1-201ENSMUST00000038188 Ttc21bQ0HA38 1315 aa13.47□□□□□ -0.25
Limch1-201ENSMUST00000038188 Elp1Q7TT37 1333 aaKnown RBP13.47□□□□□ -0.25
Limch1-201ENSMUST00000038188 Smc4Q8CG47 1286 aa13.46□□□□□ -0.25
Limch1-201ENSMUST00000038188 Rusc2Q80U22 1514 aa13.46□□□□□ -0.25
Limch1-201ENSMUST00000038188 Dennd4bQ3U1Y4 1499 aa13.46□□□□□ -0.25
Limch1-201ENSMUST00000038188 WizO88286 1684 aaKnown RBP13.45□□□□□ -0.26
Limch1-201ENSMUST00000038188 Map3k1P53349 1493 aa13.45□□□□□ -0.26
Limch1-201ENSMUST00000038188 Inpp5dQ9ES52 1191 aa13.45□□□□□ -0.26
Limch1-201ENSMUST00000038188 PnnO35691 725 aaKnown RBP13.45□□□□□ -0.26
Limch1-201ENSMUST00000038188 4930572O03RikQ8C5Y0 211 aa13.45□□□□□ -0.26
Limch1-201ENSMUST00000038188 DroshaQ5HZJ0 1373 aaKnown RBP13.45□□□□□ -0.26
Limch1-201ENSMUST00000038188 Cnnm1Q0GA42 951 aa13.45□□□□□ -0.26
Limch1-201ENSMUST00000038188 Ankrd13dQ6PD24 605 aa13.44□□□□□ -0.26
Limch1-201ENSMUST00000038188 Slc4a10Q5DTL9 1118 aa13.44□□□□□ -0.26
Limch1-201ENSMUST00000038188 MpripP97434 1024 aa13.43□□□□□ -0.26
Limch1-201ENSMUST00000038188 NexmifQ5DTT1 1515 aa13.43□□□□□ -0.26
Limch1-201ENSMUST00000038188 PnisrA2AJT4 805 aaKnown RBP13.43□□□□□ -0.26
Limch1-201ENSMUST00000038188 Fam184bQ0KK56 942 aa13.43□□□□□ -0.26
Limch1-201ENSMUST00000038188 Hmgb2P30681 210 aaKnown RBP13.43□□□□□ -0.26
Limch1-201ENSMUST00000038188 Mapk8ip1Q9WVI9 707 aa13.43□□□□□ -0.26
Limch1-201ENSMUST00000038188 Exoc5Q3TPX4 708 aa13.41□□□□□ -0.26
Limch1-201ENSMUST00000038188 Gnl3lQ6PGG6 577 aaKnown RBP13.41□□□□□ -0.26
Limch1-201ENSMUST00000038188 Strn4P58404 760 aa13.41□□□□□ -0.26
Limch1-201ENSMUST00000038188 TefQ9JLC6 301 aa13.41□□□□□ -0.26
Limch1-201ENSMUST00000038188 Hs1bp3Q3TC93 395 aa13.4□□□□□ -0.26
Limch1-201ENSMUST00000038188 Ksr2Q3UVC0 959 aa13.4□□□□□ -0.26
Limch1-201ENSMUST00000038188 Dixdc1Q80Y83 711 aa13.4□□□□□ -0.26
Limch1-201ENSMUST00000038188 Zmym3Q9JLM4 1370 aa13.4□□□□□ -0.26
Limch1-201ENSMUST00000038188 Naip1Q9QWK5 1403 aa13.4□□□□□ -0.26
Limch1-201ENSMUST00000038188 Ttc5Q99LG4 440 aa13.4□□□□□ -0.27
Limch1-201ENSMUST00000038188 Dnai2A2AC93 623 aa13.39□□□□□ -0.27
Limch1-201ENSMUST00000038188 HnrnpuQ8VEK3 800 aaKnown RBP13.39□□□□□ -0.27
Limch1-201ENSMUST00000038188 PxdnQ3UQ28 1475 aa13.39□□□□□ -0.27
Limch1-201ENSMUST00000038188 Rapgef3Q8VCC8 918 aa13.39□□□□□ -0.27
Limch1-201ENSMUST00000038188 Caskin1Q6P9K8 1431 aa13.39□□□□□ -0.27
Limch1-201ENSMUST00000038188 NpatQ8BMA5 1420 aa13.39□□□□□ -0.27
Limch1-201ENSMUST00000038188 Rapgef4Q9EQZ6 1011 aa13.39□□□□□ -0.27
Limch1-201ENSMUST00000038188 Ccdc85cE9Q6B2 420 aa13.38□□□□□ -0.27
Limch1-201ENSMUST00000038188 HypkQ9CR41 129 aa13.38□□□□□ -0.27
Limch1-201ENSMUST00000038188 Znf428Q8C1M2 176 aa13.38□□□□□ -0.27
Limch1-201ENSMUST00000038188 Arhgef5E9Q7D5 1581 aa13.38□□□□□ -0.27
Limch1-201ENSMUST00000038188 Cdca7Q9D0M2 382 aa13.38□□□□□ -0.27
Limch1-201ENSMUST00000038188 Kcnh5Q920E3 988 aa13.38□□□□□ -0.27
Limch1-201ENSMUST00000038188 Pde4bB1AWC9 736 aa13.37□□□□□ -0.27
Limch1-201ENSMUST00000038188 CrbnQ8C7D2 445 aa13.37□□□□□ -0.27
Limch1-201ENSMUST00000038188 GsdmaQ9EST1 446 aa13.37□□□□□ -0.27
Limch1-201ENSMUST00000038188 Zranb1Q7M760 708 aa13.37□□□□□ -0.27
Limch1-201ENSMUST00000038188 Sall3Q62255 1320 aa13.37□□□□□ -0.27
Limch1-201ENSMUST00000038188 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.37□□□□□ -0.27
Limch1-201ENSMUST00000038188 Aebp2Q9Z248 504 aaKnown RBP13.36□□□□□ -0.27
Limch1-201ENSMUST00000038188 AI481877A2ALV5 1481 aa13.36□□□□□ -0.27
Limch1-201ENSMUST00000038188 Ell2Q3UKU1 639 aa13.35□□□□□ -0.27
Limch1-201ENSMUST00000038188 Brpf1B2RRD7 1212 aa13.35□□□□□ -0.27
Limch1-201ENSMUST00000038188 Dbr1Q923B1 550 aa13.35□□□□□ -0.27
Limch1-201ENSMUST00000038188 Trim30dE9PWL0 497 aa13.35□□□□□ -0.27
Limch1-201ENSMUST00000038188 Gtpbp6Q3U6U5 514 aa13.35□□□□□ -0.27
Limch1-201ENSMUST00000038188 Dzip1Q8BMD2 852 aa13.35□□□□□ -0.27
Limch1-201ENSMUST00000038188 MecomP14404 1042 aa13.34□□□□□ -0.27
Limch1-201ENSMUST00000038188 Exoc6Q8R313 802 aa13.34□□□□□ -0.27
Limch1-201ENSMUST00000038188 Dapk1Q80YE7 1442 aa13.34□□□□□ -0.27
Limch1-201ENSMUST00000038188 NgdnQ9DB96 315 aaKnown RBP13.34□□□□□ -0.27
Limch1-201ENSMUST00000038188 Il16O54824 1322 aa13.33□□□□□ -0.28
Limch1-201ENSMUST00000038188 NexnQ7TPW1 607 aa13.33□□□□□ -0.28
Limch1-201ENSMUST00000038188 TimelessQ9R1X4 1197 aa13.33□□□□□ -0.28
Limch1-201ENSMUST00000038188 Myom3A2ABU4 1439 aa13.33□□□□□ -0.28
Limch1-201ENSMUST00000038188 Zscan21Q07231 555 aa13.32□□□□□ -0.28
Limch1-201ENSMUST00000038188 Eno4Q8C042 619 aa13.32□□□□□ -0.28
Limch1-201ENSMUST00000038188 Vps53Q8CCB4 832 aa13.32□□□□□ -0.28
Limch1-201ENSMUST00000038188 Samd9lQ69Z37 1561 aa13.32□□□□□ -0.28
Limch1-201ENSMUST00000038188 Pla2r1Q62028 1487 aa13.32□□□□□ -0.28
Limch1-201ENSMUST00000038188 Jdp2P97875 163 aa13.32□□□□□ -0.28
Limch1-201ENSMUST00000038188 Slc52a2Q9D8F3 450 aa13.32□□□□□ -0.28
Limch1-201ENSMUST00000038188 Fkbp4P30416 458 aa13.32□□□□□ -0.28
Limch1-201ENSMUST00000038188 Anapc15P60007 132 aa13.32□□□□□ -0.28
Limch1-201ENSMUST00000038188 Eif3bQ8JZQ9 803 aaKnown RBP13.32□□□□□ -0.28
Limch1-201ENSMUST00000038188 Ppip5k1A2ARP1 1436 aa13.31□□□□□ -0.28
Limch1-201ENSMUST00000038188 Nol11Q8BJW5 723 aaKnown RBP13.31□□□□□ -0.28
Limch1-201ENSMUST00000038188 Trim34aQ99PP6 485 aa13.31□□□□□ -0.28
Limch1-201ENSMUST00000038188 Cep170Q6A065 1588 aa13.31□□□□□ -0.28
Limch1-201ENSMUST00000038188 Noc3lQ8VI84 807 aaKnown RBP13.31□□□□□ -0.28
Limch1-201ENSMUST00000038188 Pde3aQ9Z0X4 1141 aa13.31□□□□□ -0.28
Limch1-201ENSMUST00000038188 Smg6P61406 1418 aaKnown RBP13.3□□□□□ -0.28
Limch1-201ENSMUST00000038188 Znf697Q569E7 569 aa13.3□□□□□ -0.28
Limch1-201ENSMUST00000038188 Arap1Q4LDD4 1452 aa13.3□□□□□ -0.28
Limch1-201ENSMUST00000038188 Dhx9O70133 1380 aaKnown RBP13.3□□□□□ -0.28
Limch1-201ENSMUST00000038188 Ttll13A4Q9F6 804 aa13.3□□□□□ -0.28
Limch1-201ENSMUST00000038188 Ddx11Q6AXC6 880 aa13.3□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 81.4 ms