RNA–Protein interactions for RNA: ENSMUST00000035026.4

Trim42-201, Transcript of Tripartite motif-containing protein 42, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim42, Length 2,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42-201ENSMUST00000035026 NefmP08553 848 aa12.35□□□□□ -0.43
Trim42-201ENSMUST00000035026 Kif13aQ9EQW7 1749 aa12.34□□□□□ -0.43
Trim42-201ENSMUST00000035026 Rtl5Q5DTT4 599 aa12.34□□□□□ -0.43
Trim42-201ENSMUST00000035026 Itsn1Q9Z0R4 1714 aa12.34□□□□□ -0.43
Trim42-201ENSMUST00000035026 Edc4Q3UJB9 1406 aaKnown RBP12.33□□□□□ -0.43
Trim42-201ENSMUST00000035026 Zfp777B9EKF4 885 aa12.33□□□□□ -0.44
Trim42-201ENSMUST00000035026 Znf326O88291 580 aa12.33□□□□□ -0.44
Trim42-201ENSMUST00000035026 Abca8aQ8K442 1620 aa12.33□□□□□ -0.44
Trim42-201ENSMUST00000035026 Uggt1Q6P5E4 1551 aa12.33□□□□□ -0.44
Trim42-201ENSMUST00000035026 Ankrd36D3Z4K0 1415 aa12.33□□□□□ -0.44
Trim42-201ENSMUST00000035026 Skint5A7XUY5 1461 aa12.33□□□□□ -0.44
Trim42-201ENSMUST00000035026 Gm13697A2AK42 830 aa12.32□□□□□ -0.44
Trim42-201ENSMUST00000035026 Pkd2O35245 966 aa12.32□□□□□ -0.44
Trim42-201ENSMUST00000035026 Pik3c2gO70167 1506 aa12.32□□□□□ -0.44
Trim42-201ENSMUST00000035026 Efcab6Q6P1E8 1516 aa12.31□□□□□ -0.44
Trim42-201ENSMUST00000035026 Dot1lQ6XZL8 1540 aa12.31□□□□□ -0.44
Trim42-201ENSMUST00000035026 Fbxo3Q9DC63 480 aa12.31□□□□□ -0.44
Trim42-201ENSMUST00000035026 Ehbp1l1Q99MS7 1716 aa12.31□□□□□ -0.44
Trim42-201ENSMUST00000035026 Scn4aQ9ER60 1841 aa12.3□□□□□ -0.44
Trim42-201ENSMUST00000035026 Cyb5rlB1AS42 316 aa12.3□□□□□ -0.44
Trim42-201ENSMUST00000035026 Dip2aQ8BWT5 1523 aa12.3□□□□□ -0.44
Trim42-201ENSMUST00000035026 Ppip5k1A2ARP1 1436 aa12.28□□□□□ -0.44
Trim42-201ENSMUST00000035026 Mroh1E0CZ22 1640 aa12.28□□□□□ -0.44
Trim42-201ENSMUST00000035026 Rimbp3Q3V0F0 1606 aa12.28□□□□□ -0.44
Trim42-201ENSMUST00000035026 Erich6D3Z6S9 713 aa12.27□□□□□ -0.45
Trim42-201ENSMUST00000035026 ErbinQ80TH2 1402 aa12.27□□□□□ -0.45
Trim42-201ENSMUST00000035026 Naip7Q9JIB3 1402 aa12.27□□□□□ -0.45
Trim42-201ENSMUST00000035026 Phlpp1Q8CHE4 1687 aa12.26□□□□□ -0.45
Trim42-201ENSMUST00000035026 DroshaQ5HZJ0 1373 aaKnown RBP12.25□□□□□ -0.45
Trim42-201ENSMUST00000035026 Eid3Q3V124 375 aa12.25□□□□□ -0.45
Trim42-201ENSMUST00000035026 Sall3Q62255 1320 aa12.25□□□□□ -0.45
Trim42-201ENSMUST00000035026 AatkQ80YE4 1365 aa12.24□□□□□ -0.45
Trim42-201ENSMUST00000035026 Rprd2Q6NXI6 1469 aaKnown RBP12.24□□□□□ -0.45
Trim42-201ENSMUST00000035026 GphnQ8BUV3 769 aaKnown RBP12.24□□□□□ -0.45
Trim42-201ENSMUST00000035026 Stk24Q99KH8 431 aa12.24□□□□□ -0.45
Trim42-201ENSMUST00000035026 Gemin5Q8BX17 1502 aaKnown RBP12.24□□□□□ -0.45
Trim42-201ENSMUST00000035026 Gtf3c3Q3TMP1 882 aa12.23□□□□□ -0.45
Trim42-201ENSMUST00000035026 Anp32bQ9EST5 272 aaKnown RBP12.23□□□□□ -0.45
Trim42-201ENSMUST00000035026 Rock1P70335 1354 aa12.23□□□□□ -0.45
Trim42-201ENSMUST00000035026 Scaf11E9PZM7 1456 aaKnown RBP12.22□□□□□ -0.45
Trim42-201ENSMUST00000035026 Prrc2bQ7TPM1 1486 aaKnown RBP12.22□□□□□ -0.45
Trim42-201ENSMUST00000035026 PplQ9R269 1755 aa12.22□□□□□ -0.45
Trim42-201ENSMUST00000035026 Zc3h13E9Q784 1729 aaKnown RBP12.21□□□□□ -0.45
Trim42-201ENSMUST00000035026 Myom1Q62234 1667 aaKnown RBP12.21□□□□□ -0.45
Trim42-201ENSMUST00000035026 Eif2ak4Q9QZ05 1648 aa12.21□□□□□ -0.45
Trim42-201ENSMUST00000035026 Ncoa1P70365 1447 aa12.21□□□□□ -0.45
Trim42-201ENSMUST00000035026 Usp47Q8BY87 1376 aa12.21□□□□□ -0.45
Trim42-201ENSMUST00000035026 Ltbp4Q8K4G1 1666 aa12.21□□□□□ -0.46
Trim42-201ENSMUST00000035026 Rims2Q9EQZ7 1530 aa12.2□□□□□ -0.46
Trim42-201ENSMUST00000035026 Washc2Q6PGL7 1334 aa12.2□□□□□ -0.46
Trim42-201ENSMUST00000035026 Plxnc1Q9QZC2 1574 aa12.19□□□□□ -0.46
Trim42-201ENSMUST00000035026 Hspa5P20029 655 aaKnown RBP12.19□□□□□ -0.46
Trim42-201ENSMUST00000035026 Adamts13Q769J6 1426 aa12.18□□□□□ -0.46
Trim42-201ENSMUST00000035026 Myo3aQ8K3H5 1613 aa12.17□□□□□ -0.46
Trim42-201ENSMUST00000035026 Fam71e1A1L3C1 212 aa12.17□□□□□ -0.46
Trim42-201ENSMUST00000035026 Ythdc1E9Q5K9 736 aaKnown RBP12.17□□□□□ -0.46
Trim42-201ENSMUST00000035026 Lmtk3Q5XJV6 1424 aa12.17□□□□□ -0.46
Trim42-201ENSMUST00000035026 Tulp4Q9JIL5 1547 aa12.17□□□□□ -0.46
Trim42-201ENSMUST00000035026 AU022751B1B0V2 589 aa12.16□□□□□ -0.46
Trim42-201ENSMUST00000035026 Rims1Q99NE5 1463 aa12.16□□□□□ -0.46
Trim42-201ENSMUST00000035026 Plcd4Q8K3R3 807 aa12.15□□□□□ -0.46
Trim42-201ENSMUST00000035026 Setd1aE9PYH6 1716 aa12.15□□□□□ -0.46
Trim42-201ENSMUST00000035026 Arhgef28P97433 1693 aa12.15□□□□□ -0.46
Trim42-201ENSMUST00000035026 Txndc2Q6P902 515 aa12.14□□□□□ -0.47
Trim42-201ENSMUST00000035026 Iqgap1Q9JKF1 1657 aaKnown RBP12.14□□□□□ -0.47
Trim42-201ENSMUST00000035026 Mroh3A0A1D5RM54 893 aa12.14□□□□□ -0.47
Trim42-201ENSMUST00000035026 Slit3Q9WVB4 1523 aa12.13□□□□□ -0.47
Trim42-201ENSMUST00000035026 Ipo4Q8VI75 1082 aa12.13□□□□□ -0.47
Trim42-201ENSMUST00000035026 Med1Q925J9 1575 aa12.13□□□□□ -0.47
Trim42-201ENSMUST00000035026 Arid4bA2CG63 1314 aaKnown RBP12.13□□□□□ -0.47
Trim42-201ENSMUST00000035026 PalldQ9ET54 1408 aa12.13□□□□□ -0.47
Trim42-201ENSMUST00000035026 IghaA0A0A6YXW6 389 aa12.12□□□□□ -0.47
Trim42-201ENSMUST00000035026 Rgl3Q3UYI5 709 aa12.12□□□□□ -0.47
Trim42-201ENSMUST00000035026 Tshz2Q68FE9 1030 aa12.12□□□□□ -0.47
Trim42-201ENSMUST00000035026 Nrxn3Q6P9K9 1571 aa12.12□□□□□ -0.47
Trim42-201ENSMUST00000035026 Cep152A2AUM9 1736 aaKnown RBP12.11□□□□□ -0.47
Trim42-201ENSMUST00000035026 Cdk13Q69ZA1 1511 aaKnown RBP12.1□□□□□ -0.47
Trim42-201ENSMUST00000035026 MaddQ80U28 1577 aa12.1□□□□□ -0.47
Trim42-201ENSMUST00000035026 Samd1D3YXK1 519 aa12.1□□□□□ -0.47
Trim42-201ENSMUST00000035026 Psme1P97371 249 aa12.1□□□□□ -0.47
Trim42-201ENSMUST00000035026 Rbm10Q99KG3 930 aaKnown RBP12.1□□□□□ -0.47
Trim42-201ENSMUST00000035026 Tubgcp6G5E8P0 1769 aa12.1□□□□□ -0.47
Trim42-201ENSMUST00000035026 Pip4k2bQ80XI4 416 aa12.1□□□□□ -0.47
Trim42-201ENSMUST00000035026 P3h3Q8CG70 732 aa12.1□□□□□ -0.47
Trim42-201ENSMUST00000035026 Thsd7aQ69ZU6 1645 aa12.09□□□□□ -0.47
Trim42-201ENSMUST00000035026 Vsig10D3YX43 558 aa12.09□□□□□ -0.47
Trim42-201ENSMUST00000035026 Ccdc9Q8VC31 543 aaKnown RBP12.09□□□□□ -0.47
Trim42-201ENSMUST00000035026 Mbd5B1AYB6 1498 aa12.08□□□□□ -0.48
Trim42-201ENSMUST00000035026 Cdk5rap2Q8K389 1822 aa12.07□□□□□ -0.48
Trim42-201ENSMUST00000035026 Arid3aQ62431 601 aa12.07□□□□□ -0.48
Trim42-201ENSMUST00000035026 Asxl2Q8BZ32 1370 aa12.07□□□□□ -0.48
Trim42-201ENSMUST00000035026 Gli3Q61602 1583 aa12.06□□□□□ -0.48
Trim42-201ENSMUST00000035026 Rapgef3Q8VCC8 918 aa12.06□□□□□ -0.48
Trim42-201ENSMUST00000035026 Arap3Q8R5G7 1538 aa12.06□□□□□ -0.48
Trim42-201ENSMUST00000035026 Gm13695A2AK44 830 aa12.05□□□□□ -0.48
Trim42-201ENSMUST00000035026 AampJ3QN89 436 aa12.05□□□□□ -0.48
Trim42-201ENSMUST00000035026 PzpQ61838 1495 aa12.05□□□□□ -0.48
Trim42-201ENSMUST00000035026 Ifit1bl1D3Z6F0 470 aa12.05□□□□□ -0.48
Trim42-201ENSMUST00000035026 Polr3aB2RXC6 1390 aa12.05□□□□□ -0.48
Trim42-201ENSMUST00000035026 Cpsf1Q9EPU4 1441 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 42.1 ms