RNA–Protein interactions for RNA: ENSMUST00000025521.8

Cdx1-201, Transcript of Homeobox protein CDX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx1, Length 1,750 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1-201ENSMUST00000025521 CenpbP27790 599 aa28.06■■■□□ 2.08
Cdx1-201ENSMUST00000025521 Gm156Q58A37 223 aa28.06■■■□□ 2.08
Cdx1-201ENSMUST00000025521 Col17a1Q07563 1470 aa28.06■■■□□ 2.08
Cdx1-201ENSMUST00000025521 Cdk5rap2Q8K389 1822 aa28.05■■■□□ 2.08
Cdx1-201ENSMUST00000025521 Dip2cE9PWR4 1557 aa28.05■■■□□ 2.08
Cdx1-201ENSMUST00000025521 Ino80Q6ZPV2 1559 aa28.05■■■□□ 2.08
Cdx1-201ENSMUST00000025521 Myom2Q14BI5 1463 aa28.04■■■□□ 2.08
Cdx1-201ENSMUST00000025521 Erich6D3Z6S9 713 aa28.04■■■□□ 2.08
Cdx1-201ENSMUST00000025521 PrxO55103 1391 aa28.02■■■□□ 2.08
Cdx1-201ENSMUST00000025521 Ptch1Q61115 1434 aa28.02■■■□□ 2.08
Cdx1-201ENSMUST00000025521 Sall3Q62255 1320 aa28.01■■■□□ 2.08
Cdx1-201ENSMUST00000025521 Sipa1l1Q8C0T5 1782 aa28.01■■■□□ 2.07
Cdx1-201ENSMUST00000025521 Anp32bQ9EST5 272 aaKnown RBP27.99■■■□□ 2.07
Cdx1-201ENSMUST00000025521 Srcin1Q9QWI6 1250 aa27.99■■■□□ 2.07
Cdx1-201ENSMUST00000025521 Calr4Q3TQS0 420 aa27.99■■■□□ 2.07
Cdx1-201ENSMUST00000025521 Stard8Q8K031 1019 aa27.99■■■□□ 2.07
Cdx1-201ENSMUST00000025521 Myo3aQ8K3H5 1613 aa27.98■■■□□ 2.07
Cdx1-201ENSMUST00000025521 DnmbpQ6TXD4 1580 aa27.98■■■□□ 2.07
Cdx1-201ENSMUST00000025521 AatkQ80YE4 1365 aa27.97■■■□□ 2.07
Cdx1-201ENSMUST00000025521 Adamts7Q68SA9 1657 aa27.97■■■□□ 2.07
Cdx1-201ENSMUST00000025521 Talpid3E9PV87 1520 aa27.96■■■□□ 2.07
Cdx1-201ENSMUST00000025521 Adgrl3Q80TS3 1537 aa27.96■■■□□ 2.07
Cdx1-201ENSMUST00000025521 SafbD3YXK2 937 aaKnown RBP27.94■■■□□ 2.06
Cdx1-201ENSMUST00000025521 Plxnc1Q9QZC2 1574 aa27.93■■■□□ 2.06
Cdx1-201ENSMUST00000025521 Nphp4P59240 1425 aa27.93■■■□□ 2.06
Cdx1-201ENSMUST00000025521 Pank3Q8R2W9 370 aa27.93■■■□□ 2.06
Cdx1-201ENSMUST00000025521 Gm16486A0A1D5RMD1 1434 aa27.93■■■□□ 2.06
Cdx1-201ENSMUST00000025521 Tmf1B9EKI3 1091 aa27.92■■■□□ 2.06
Cdx1-201ENSMUST00000025521 Uggt1Q6P5E4 1551 aa27.92■■■□□ 2.06
Cdx1-201ENSMUST00000025521 Tex14Q7M6U3 1450 aa27.89■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Kdm2aP59997 1161 aa27.88■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Zscan10Q3URR7 782 aa27.88■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Stk24Q99KH8 431 aa27.87■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Kdm5aQ3UXZ9 1690 aa27.87■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Gm20521D3Z5F7 333 aa27.86■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Rpgrip1lQ8CG73 1264 aa27.86■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Ttc37F8VPK0 1563 aa27.85■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Zscan21Q07231 555 aa27.85■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Gm38655A0A286YDK6 273 aa27.84■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Ofd1Q80Z25 1017 aa27.84■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Inpp5dQ9ES52 1191 aa27.84■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Knl1Q66JQ7 1612 aa27.84■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Zbtb4Q5F293 982 aa27.83■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Mroh1E0CZ22 1640 aa27.83■■■□□ 2.05
Cdx1-201ENSMUST00000025521 Hecw2Q6I6G8 1578 aa27.82■■■□□ 2.04
Cdx1-201ENSMUST00000025521 Ift172Q6VH22 1749 aa27.82■■■□□ 2.04
Cdx1-201ENSMUST00000025521 Srpk2O54781 681 aaKnown RBP27.82■■■□□ 2.04
Cdx1-201ENSMUST00000025521 Gtf2e1Q9D0D5 440 aa27.81■■■□□ 2.04
Cdx1-201ENSMUST00000025521 Synj2Q9D2G5 1434 aa27.8■■■□□ 2.04
Cdx1-201ENSMUST00000025521 Ttbk1Q6PCN3 1308 aa27.79■■■□□ 2.04
Cdx1-201ENSMUST00000025521 Fam184bQ0KK56 942 aa27.79■■■□□ 2.04
Cdx1-201ENSMUST00000025521 Myom1Q62234 1667 aaKnown RBP27.78■■■□□ 2.04
Cdx1-201ENSMUST00000025521 Os9Q8K2C7 672 aa27.77■■■□□ 2.04
Cdx1-201ENSMUST00000025521 Cfap65Q3V0B4 1847 aa27.77■■■□□ 2.04
Cdx1-201ENSMUST00000025521 Slc4a1apE9PX68 744 aa27.76■■■□□ 2.03
Cdx1-201ENSMUST00000025521 Eif5bQ05D44 1216 aaKnown RBP27.76■■■□□ 2.03
Cdx1-201ENSMUST00000025521 Usp40Q8BWR4 1235 aa27.76■■■□□ 2.03
Cdx1-201ENSMUST00000025521 Yeats2Q3TUF7 1407 aa27.75■■■□□ 2.03
Cdx1-201ENSMUST00000025521 Fan1Q69ZT1 1020 aa27.73■■■□□ 2.03
Cdx1-201ENSMUST00000025521 Mak16Q8BGS0 296 aaKnown RBP27.73■■■□□ 2.03
Cdx1-201ENSMUST00000025521 MaddQ80U28 1577 aa27.71■■■□□ 2.03
Cdx1-201ENSMUST00000025521 Rab3gap2Q8BMG7 1366 aa27.7■■■□□ 2.03
Cdx1-201ENSMUST00000025521 Q7TT23 1179 aa27.7■■■□□ 2.02
Cdx1-201ENSMUST00000025521 Anp32aO35381 247 aa27.69■■■□□ 2.02
Cdx1-201ENSMUST00000025521 Atf7ipQ7TT18 1306 aa27.69■■■□□ 2.02
Cdx1-201ENSMUST00000025521 Skint5A7XUY5 1461 aa27.69■■■□□ 2.02
Cdx1-201ENSMUST00000025521 Puf60Q3UEB3 564 aaKnown RBP27.68■■■□□ 2.02
Cdx1-201ENSMUST00000025521 PalldQ9ET54 1408 aa27.68■■■□□ 2.02
Cdx1-201ENSMUST00000025521 Slc52a2Q9D8F3 450 aa27.66■■■□□ 2.02
Cdx1-201ENSMUST00000025521 Kank1E9Q238 1360 aa27.66■■■□□ 2.02
Cdx1-201ENSMUST00000025521 AU022751B1B0V2 589 aa27.65■■■□□ 2.02
Cdx1-201ENSMUST00000025521 Lrrc7Q80TE7 1490 aa27.65■■■□□ 2.02
Cdx1-201ENSMUST00000025521 Ppp2r1aQ76MZ3 589 aa27.65■■■□□ 2.02
Cdx1-201ENSMUST00000025521 Ahdc1Q6PAL7 1594 aaKnown RBP27.64■■■□□ 2.02
Cdx1-201ENSMUST00000025521 Eif2ak4Q9QZ05 1648 aa27.63■■■□□ 2.01
Cdx1-201ENSMUST00000025521 Gprasp1Q5U4C1 1347 aa27.63■■■□□ 2.01
Cdx1-201ENSMUST00000025521 L3mbtl2P59178 703 aa27.6■■■□□ 2.01
Cdx1-201ENSMUST00000025521 Rsph4aQ8BYM7 716 aa27.6■■■□□ 2.01
Cdx1-201ENSMUST00000025521 Qser1A2BIE1 1698 aa27.58■■■□□ 2.01
Cdx1-201ENSMUST00000025521 P3h3Q8CG70 732 aa27.58■■■□□ 2.01
Cdx1-201ENSMUST00000025521 Hfm1D3Z4R1 1434 aa27.58■■■□□ 2.01
Cdx1-201ENSMUST00000025521 Zfp444Q3TDV8 331 aaKnown RBP27.58■■■□□ 2
Cdx1-201ENSMUST00000025521 InsrP15208 1372 aa27.58■■■□□ 2
Cdx1-201ENSMUST00000025521 Upf2A2AT37 1269 aaKnown RBP27.57■■■□□ 2
Cdx1-201ENSMUST00000025521 KdrP35918 1367 aa27.56■■■□□ 2
Cdx1-201ENSMUST00000025521 Kif7B7ZNG0 1348 aa27.52■■■□□ 2
Cdx1-201ENSMUST00000025521 Prrc2bQ7TPM1 1486 aaKnown RBP27.51■■□□□ 1.99
Cdx1-201ENSMUST00000025521 Ppp1r18Q8BQ30 594 aa27.5■■□□□ 1.99
Cdx1-201ENSMUST00000025521 Ttc41Q692V3 1318 aa27.5■■□□□ 1.99
Cdx1-201ENSMUST00000025521 Kif13aQ9EQW7 1749 aa27.5■■□□□ 1.99
Cdx1-201ENSMUST00000025521 Arhgap23Q69ZH9 1483 aa27.5■■□□□ 1.99
Cdx1-201ENSMUST00000025521 Wdr43Q6ZQL4 677 aaKnown RBP27.5■■□□□ 1.99
Cdx1-201ENSMUST00000025521 PtprmP28828 1452 aa27.49■■□□□ 1.99
Cdx1-201ENSMUST00000025521 CltcQ68FD5 1675 aaKnown RBP27.49■■□□□ 1.99
Cdx1-201ENSMUST00000025521 RictorQ6QI06 1708 aa27.49■■□□□ 1.99
Cdx1-201ENSMUST00000025521 Mink1Q9JM52 1308 aa27.48■■□□□ 1.99
Cdx1-201ENSMUST00000025521 Itsn1Q9Z0R4 1714 aa27.48■■□□□ 1.99
Cdx1-201ENSMUST00000025521 IqubQ8CDK3 788 aa27.48■■□□□ 1.99
Cdx1-201ENSMUST00000025521 Erbb3Q61526 1339 aa27.47■■□□□ 1.99
Cdx1-201ENSMUST00000025521 Stag3O70576 1240 aa27.46■■□□□ 1.99
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms