RNA–Protein interactions for RNA: ENSMUST00000020441.12

Vps13d-201, Transcript of Vacuolar protein sorting 13D, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Vps13d, Length 15,665 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13d-201ENSMUST00000020441 Ccdc34Q3UI66 367 aa6.76□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Plcd4Q8K3R3 807 aa6.76□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Armcx1Q9CX83 456 aa6.76□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Brpf1B2RRD7 1212 aa6.76□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Fchsd2Q3USJ8 740 aa6.76□□□□□ -1.33
Vps13d-201ENSMUST00000020441 NexnQ7TPW1 607 aa6.76□□□□□ -1.33
Vps13d-201ENSMUST00000020441 CgnP59242 1191 aa6.75□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Zscan10Q3URR7 782 aa6.75□□□□□ -1.33
Vps13d-201ENSMUST00000020441 EzrP26040 586 aaKnown RBP6.75□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Sf3a1Q8K4Z5 791 aaKnown RBP6.75□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Rtn4Q99P72 1162 aaKnown RBP6.75□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Ppm1eQ80TL0 749 aa6.75□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Ccdc173A0JLY1 547 aa6.75□□□□□ -1.33
Vps13d-201ENSMUST00000020441 OptnQ8K3K8 584 aa6.75□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Rabep1O35551 862 aa6.74□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Kri1Q8VDQ9 704 aaKnown RBP6.74□□□□□ -1.33
Vps13d-201ENSMUST00000020441 CrbnQ8C7D2 445 aa6.74□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Cabp4Q8VHC5 271 aa6.74□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Plekhg5Q66T02 1073 aa6.74□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Chmp3Q9CQ10 224 aa6.74□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Ggt6Q6PDE7 497 aa6.74□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Ccdc60Q8C4J0 545 aa6.74□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Chmp7Q8R1T1 451 aa6.74□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Smc2Q8CG48 1191 aaKnown RBP6.73□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Trim30aP15533 496 aa6.73□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Gripap1Q8VD04 806 aa6.73□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Inpp5dQ9ES52 1191 aa6.73□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Gimap6Q8K349 305 aa6.73□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Ccdc146E9Q9F7 977 aa6.73□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Igf1rQ60751 1373 aa6.72□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Sh3bgrQ9WUZ7 214 aa6.72□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Taf3Q5HZG4 932 aa6.72□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Sin3aQ60520 1274 aaKnown RBP6.72□□□□□ -1.33
Vps13d-201ENSMUST00000020441 PsapQ61207 557 aaKnown RBP6.72□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Gcc1Q9D4H2 778 aa6.72□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Kif4P33174 1231 aa6.72□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Cavin4A2AMM0 362 aa6.72□□□□□ -1.33
Vps13d-201ENSMUST00000020441 AnlnQ8K298 1121 aaKnown RBP6.72□□□□□ -1.33
Vps13d-201ENSMUST00000020441 SkilQ60665 675 aa6.71□□□□□ -1.33
Vps13d-201ENSMUST00000020441 ScribQ80U72 1612 aa6.71□□□□□ -1.33
Vps13d-201ENSMUST00000020441 Kif3cO35066 796 aa6.71□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Gabpb2P81069 414 aa6.71□□□□□ -1.34
Vps13d-201ENSMUST00000020441 ZgpatQ8VDM1 511 aa6.71□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Necab1Q8BG18 352 aa6.71□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Plekhh1Q80TI1 1356 aa6.71□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Eif3aP23116 1344 aaKnown RBP6.71□□□□□ -1.34
Vps13d-201ENSMUST00000020441 1700010I14RikQ7TPG0 532 aa6.71□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Ubxn4Q8VCH8 506 aa6.71□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Gtf3c3Q3TMP1 882 aa6.71□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Plekhd1B2RPU2 505 aa6.7□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Clstn1Q9EPL2 979 aa6.7□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Gcom1E9PZ54 550 aa6.7□□□□□ -1.34
Vps13d-201ENSMUST00000020441 MyzapQ3UIJ9 466 aa6.7□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Slc4a10Q5DTL9 1118 aa6.7□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Slc52a2Q9D8F3 450 aa6.7□□□□□ -1.34
Vps13d-201ENSMUST00000020441 CadpsQ80TJ1 1355 aa6.7□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Odf2A3KGV1 830 aaKnown RBP6.7□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Dusp9Q7TNL7 452 aa6.7□□□□□ -1.34
Vps13d-201ENSMUST00000020441 HypkQ9CR41 129 aa6.7□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Fyb1O35601 819 aa6.7□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Chaf1aQ9QWF0 911 aa6.7□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Gpatch3Q8BIY1 525 aa6.7□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Naip1Q9QWK5 1403 aa6.7□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Fgd6Q69ZL1 1399 aa6.7□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Tdrd9Q14BI7 1383 aa6.69□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Cluap1Q8R3P7 413 aa6.69□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Sv2bQ8BG39 683 aa6.69□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Ccdc30Q8BVF4 654 aa6.69□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Wdr78E9PYY5 807 aa6.69□□□□□ -1.34
Vps13d-201ENSMUST00000020441 NaspQ99MD9 773 aaKnown RBP6.69□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Duox2A2AQ99 1517 aa6.69□□□□□ -1.34
Vps13d-201ENSMUST00000020441 PdcQ9QW08 244 aa6.69□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Shq1Q7TMX5 569 aa6.69□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Pde4cQ3UEI1 686 aa6.69□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Ric3Q8BPM6 367 aa6.69□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Rhot2Q8JZN7 620 aa6.69□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Trim29Q8R2Q0 587 aa6.69□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Slc4a3P16283 1227 aa6.69□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Prl7d1P04769 244 aa6.69□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Cplx1P63040 134 aa6.69□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Krt82Q99M74 516 aa6.69□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Rab3gap2Q8BMG7 1366 aa6.68□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Pip4k2aO70172 405 aa6.68□□□□□ -1.34
Vps13d-201ENSMUST00000020441 AppP12023 770 aa6.68□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Kiaa0754Q69ZZ9 979 aa6.68□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Znf330Q922H9 316 aa6.68□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Smc3Q9CW03 1217 aaKnown RBP6.68□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Usp16Q99LG0 825 aa6.68□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Mroh2bQ7M6Y6 1581 aa6.68□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Ercc6lQ8BHK9 1240 aa6.68□□□□□ -1.34
Vps13d-201ENSMUST00000020441 NinlQ6ZQ12 1394 aa6.68□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Atf3Q60765 181 aa6.67□□□□□ -1.34
Vps13d-201ENSMUST00000020441 ScaperF8VQ70 1398 aaKnown RBP6.67□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Gm7298A0A0N4SVU1 1476 aa6.67□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Arhgef5E9Q7D5 1581 aa6.67□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Spryd3E9Q9B3 442 aa6.67□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Puf60Q3UEB3 564 aaKnown RBP6.67□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Pak3Q61036 559 aa6.67□□□□□ -1.34
Vps13d-201ENSMUST00000020441 GorabQ8BRM2 368 aa6.67□□□□□ -1.34
Vps13d-201ENSMUST00000020441 Ints3Q7TPD0 1041 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms