RNA–Protein interactions for RNA: tF(GAA)N

tF(GAA)N, Transcript of Phenylalanine tRNA (tRNA-Phe), predicted by tRNAscan-SE analysis, yeastyeast

Gene tF(GAA)N, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tF(GAA)NtF(GAA)N ALG6Q12001 544 aaKnown RBP2.4□□□□□ -2.03
tF(GAA)NtF(GAA)N DGK1Q12382 290 aa2.4□□□□□ -2.03
tF(GAA)NtF(GAA)N YPL119C-AQ3E751 87 aa2.4□□□□□ -2.03
tF(GAA)NtF(GAA)N ODC2Q99297 307 aa2.4□□□□□ -2.03
tF(GAA)NtF(GAA)N GCN4P03069 281 aa2.39□□□□□ -2.03
tF(GAA)NtF(GAA)N RPL9AP05738 191 aaKnown RBP2.39□□□□□ -2.03
tF(GAA)NtF(GAA)N RPS31P05759 152 aaKnown RBP2.39□□□□□ -2.03
tF(GAA)NtF(GAA)N COX9P07255 59 aa2.39□□□□□ -2.03
tF(GAA)NtF(GAA)N RPS18AP0CX55 146 aaKnown RBP2.39□□□□□ -2.03
tF(GAA)NtF(GAA)N RPS18BP0CX56 146 aaPredicted RBP2.39□□□□□ -2.03
tF(GAA)NtF(GAA)N ARO7P32178 256 aa2.39□□□□□ -2.03
tF(GAA)NtF(GAA)N PAU2P32612 120 aa2.39□□□□□ -2.03
tF(GAA)NtF(GAA)N UTR5P32630 166 aa2.39□□□□□ -2.03
tF(GAA)NtF(GAA)N AST1P35183 429 aa2.39□□□□□ -2.03
tF(GAA)NtF(GAA)N SHE2P36068 246 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
tF(GAA)NtF(GAA)N YKR045CP36138 183 aa2.39□□□□□ -2.03
tF(GAA)NtF(GAA)N GEP4P38812 185 aa2.39□□□□□ -2.03
tF(GAA)NtF(GAA)N IKI1P38874 309 aa2.39□□□□□ -2.03
tF(GAA)NtF(GAA)N CIN4P39110 191 aa2.39□□□□□ -2.03
tF(GAA)NtF(GAA)N YER137CP40083 148 aaKnown RBP2.39□□□□□ -2.03
tF(GAA)NtF(GAA)N SNL1P40548 159 aa2.39□□□□□ -2.03
tF(GAA)NtF(GAA)N ATG18P43601 500 aa2.39□□□□□ -2.03
tF(GAA)NtF(GAA)N GWT1P47026 490 aa2.39□□□□□ -2.03
tF(GAA)NtF(GAA)N YJR011CP47086 261 aaPredicted RBP2.39□□□□□ -2.03
tF(GAA)NtF(GAA)N SOL1P50278 321 aa2.39□□□□□ -2.03
tF(GAA)NtF(GAA)N YGR042WP53227 271 aa2.39□□□□□ -2.03
tF(GAA)NtF(GAA)N CPD1P53314 239 aa2.39□□□□□ -2.03
tF(GAA)NtF(GAA)N ERV25P54837 211 aaKnown RBP2.39□□□□□ -2.03
tF(GAA)NtF(GAA)N MAK3Q03503 176 aa2.39□□□□□ -2.03
tF(GAA)NtF(GAA)N CAB5Q03941 241 aa2.39□□□□□ -2.03
tF(GAA)NtF(GAA)N YPL225WQ08971 146 aaKnown RBP2.39□□□□□ -2.03
tF(GAA)NtF(GAA)N YEL009C-AA0A023PZF2 135 aa2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N GAL1P04385 528 aa2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N CDC31P06704 161 aaKnown RBP2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N RPL3P14126 387 aaKnown RBP2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N CKA1P15790 372 aa2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N RFA1P22336 621 aaKnown RBP2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N AHC2P25649 128 aa2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N RFA3P26755 122 aaKnown RBP2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N GAR1P28007 205 aaKnown RBP2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N RNP1P32385 249 aa2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N ECM25P32525 599 aa2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N AGA2P32781 87 aa2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N RPB7P34087 171 aa2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N SRL3P36167 246 aa2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N QDR3P38227 689 aa2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N YPT31P38555 223 aaKnown RBP2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N MPC2P38857 129 aa2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N EGD2P38879 174 aaKnown RBP2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N NVJ1P38881 321 aa2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N YGR210CP42942 411 aa2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N YJL118WP47022 219 aa2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N YJR012CP47087 207 aa2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N IMO32P53219 342 aa2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N GIS2P53849 153 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
tF(GAA)NtF(GAA)N LRS4Q04087 347 aaKnown RBP2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N HNT1Q04344 158 aaKnown RBP2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N ASM4Q05166 528 aa2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N PEX10Q05568 337 aa2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N RRG8Q06109 277 aa2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N RDS3Q06835 107 aaPredicted RBP2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N YOL029CQ08187 201 aa2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N SOG2Q08817 791 aa2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N DCP1Q12517 231 aaPredicted RBP2.38□□□□□ -2.03
tF(GAA)NtF(GAA)N CDC34P14682 295 aa2.37□□□□□ -2.03
tF(GAA)NtF(GAA)N MDH1P17505 334 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
tF(GAA)NtF(GAA)N FAR1P21268 830 aa2.37□□□□□ -2.03
tF(GAA)NtF(GAA)N YCP4P25349 247 aaKnown RBP2.37□□□□□ -2.03
tF(GAA)NtF(GAA)N YLF2P38746 405 aa2.37□□□□□ -2.03
tF(GAA)NtF(GAA)N MST28P39552 234 aa2.37□□□□□ -2.03
tF(GAA)NtF(GAA)N SNU13P39990 126 aaKnown RBP2.37□□□□□ -2.03
tF(GAA)NtF(GAA)N RFC2P40348 353 aa2.37□□□□□ -2.03
tF(GAA)NtF(GAA)N SIM1P40472 476 aa2.37□□□□□ -2.03
tF(GAA)NtF(GAA)N YJL163CP46996 555 aa2.37□□□□□ -2.03
tF(GAA)NtF(GAA)N MST27P53176 234 aa2.37□□□□□ -2.03
tF(GAA)NtF(GAA)N ALG9P53868 555 aaKnown RBP2.37□□□□□ -2.03
tF(GAA)NtF(GAA)N TLG1Q03322 224 aa2.37□□□□□ -2.03
tF(GAA)NtF(GAA)N RBD2Q12270 262 aa2.37□□□□□ -2.03
tF(GAA)NtF(GAA)N TAR1Q8TGM6 124 aa2.37□□□□□ -2.03
tF(GAA)NtF(GAA)N YLR358CO13565 187 aa2.36□□□□□ -2.03
tF(GAA)NtF(GAA)N MET17P06106 444 aa2.36□□□□□ -2.03
tF(GAA)NtF(GAA)N PET494P07390 489 aaPredicted RBP2.36□□□□□ -2.03
tF(GAA)NtF(GAA)N PET54P10834 293 aa2.36□□□□□ -2.03
tF(GAA)NtF(GAA)N NOP1P15646 327 aaKnown RBP2.36□□□□□ -2.03
tF(GAA)NtF(GAA)N URA6P15700 204 aa2.36□□□□□ -2.03
tF(GAA)NtF(GAA)N CDC23P16522 626 aa2.36□□□□□ -2.03
tF(GAA)NtF(GAA)N PRE7P23724 241 aaKnown RBP2.36□□□□□ -2.03
tF(GAA)NtF(GAA)N IFM1P25038 676 aa2.36□□□□□ -2.03
tF(GAA)NtF(GAA)N ROX3P25046 220 aa2.36□□□□□ -2.03
tF(GAA)NtF(GAA)N SRY1P36007 326 aa2.36□□□□□ -2.03
tF(GAA)NtF(GAA)N YBR184WP38299 523 aa2.36□□□□□ -2.03
tF(GAA)NtF(GAA)N SAP30P38429 201 aa2.36□□□□□ -2.03
tF(GAA)NtF(GAA)N FCY21P40039 528 aa2.36□□□□□ -2.03
tF(GAA)NtF(GAA)N YIL060WP40519 144 aa2.36□□□□□ -2.03
tF(GAA)NtF(GAA)N LST8P41318 303 aa2.36□□□□□ -2.03
tF(GAA)NtF(GAA)N AGX1P43567 385 aa2.36□□□□□ -2.03
tF(GAA)NtF(GAA)N RPS0BP46654 252 aaKnown RBP2.36□□□□□ -2.03
tF(GAA)NtF(GAA)N VMA10P48836 114 aaKnown RBP2.36□□□□□ -2.03
tF(GAA)NtF(GAA)N YDR179W-AQ03983 463 aa2.36□□□□□ -2.03
tF(GAA)NtF(GAA)N YDR286CQ05530 114 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 72.5 ms