RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 REP2P03872 296 aa-1.94□□□□□ -2.72
snR38snR38 MRPL17P36528 281 aa-1.94□□□□□ -2.72
snR38snR38 ILM1P47155 203 aa-1.94□□□□□ -2.72
snR38snR38 YNL122CP53921 115 aaPredicted RBP-1.94□□□□□ -2.72
snR38snR38 PRO2P54885 456 aaKnown RBP-1.94□□□□□ -2.72
snR38snR38 SNZ1Q03148 297 aa-1.94□□□□□ -2.72
snR38snR38 FMN1Q03778 218 aa-1.94□□□□□ -2.72
snR38snR38 RIF1P29539 1916 aa-1.95□□□□□ -2.72
snR38snR38 COX8P04039 78 aa-1.95□□□□□ -2.72
snR38snR38 HAP2P06774 265 aa-1.95□□□□□ -2.72
snR38snR38 HOM6P31116 359 aaKnown RBP-1.95□□□□□ -2.72
snR38snR38 ASF2P32448 525 aaPredicted RBP-1.95□□□□□ -2.72
snR38snR38 PAM17P36147 197 aa-1.95□□□□□ -2.72
snR38snR38 MRPL39P36533 70 aa-1.95□□□□□ -2.72
snR38snR38 YHL018WP38744 120 aaPredicted RBP-1.95□□□□□ -2.72
snR38snR38 SWP1Q02795 286 aa-1.95□□□□□ -2.72
snR38snR38 PRP11Q07350 266 aaPredicted RBP-1.95□□□□□ -2.72
snR38snR38 PRE1P22141 198 aaKnown RBP-1.96□□□□□ -2.72
snR38snR38 ARO7P32178 256 aa-1.96□□□□□ -2.72
snR38snR38 MRPL28P36527 147 aa-1.96□□□□□ -2.72
snR38snR38 SWC5P38326 303 aa-1.96□□□□□ -2.72
snR38snR38 URA8P38627 578 aaPredicted RBP-1.96□□□□□ -2.72
snR38snR38 AGP3P43548 558 aa-1.96□□□□□ -2.72
snR38snR38 SPC19Q03954 165 aa-1.96□□□□□ -2.72
snR38snR38 RRP40Q08285 240 aaKnown RBP-1.96□□□□□ -2.72
snR38snR38 YPR170W-BP0C5R9 85 aa-1.97□□□□□ -2.72
snR38snR38 YPK2P18961 677 aa-1.97□□□□□ -2.72
snR38snR38 CAF4P36130 643 aa-1.97□□□□□ -2.72
snR38snR38 OTU1P43558 301 aa-1.97□□□□□ -2.72
snR38snR38 AIM25P47140 327 aa-1.97□□□□□ -2.72
snR38snR38 PDR17P53844 350 aa-1.97□□□□□ -2.72
snR38snR38 YNL010WP53981 241 aaKnown RBP-1.97□□□□□ -2.72
snR38snR38 VPS9P54787 451 aa-1.97□□□□□ -2.72
snR38snR38 YML096WQ04489 525 aa-1.97□□□□□ -2.72
snR38snR38 ATG17Q06410 417 aa-1.97□□□□□ -2.72
snR38snR38 BER1Q06688 274 aaKnown RBP-1.97□□□□□ -2.72
snR38snR38 YOR186WQ08560 144 aa-1.97□□□□□ -2.72
snR38snR38 FCY1Q12178 158 aa-1.97□□□□□ -2.72
snR38snR38 DUR1,2P32528 1835 aaKnown RBP-1.97□□□□□ -2.72
snR38snR38 CDC31P06704 161 aaKnown RBP-1.98□□□□□ -2.73
snR38snR38 MEK1P24719 497 aaPredicted RBP-1.98□□□□□ -2.73
snR38snR38 IDH1P28834 360 aaKnown RBP RIP-Chip data-1.98□□□□□ -2.73not detected
snR38snR38 CCS1P40202 249 aaKnown RBP-1.98□□□□□ -2.73
snR38snR38 GCD14P46959 383 aaPredicted RBP-1.98□□□□□ -2.73
snR38snR38 YMD8Q03697 442 aa-1.98□□□□□ -2.73
snR38snR38 YLR173WQ06247 608 aa-1.98□□□□□ -2.73
snR38snR38 SNF8Q12483 233 aa-1.98□□□□□ -2.73
snR38snR38 TIM9O74700 87 aa-1.99□□□□□ -2.73
snR38snR38 YKR104WP0CE69 306 aa-1.99□□□□□ -2.73
snR38snR38 URA5P13298 226 aaKnown RBP-1.99□□□□□ -2.73
snR38snR38 ATG22P25568 528 aa-1.99□□□□□ -2.73
snR38snR38 SGE1P33335 543 aa-1.99□□□□□ -2.73
snR38snR38 SFK1P35735 353 aa-1.99□□□□□ -2.73
snR38snR38 PAN3P36102 679 aaPredicted RBP-1.99□□□□□ -2.73
snR38snR38 THO1P40040 218 aaKnown RBP-1.99□□□□□ -2.73
snR38snR38 DSN1P40568 576 aa-1.99□□□□□ -2.73
snR38snR38 GLR1P41921 483 aaKnown RBP-1.99□□□□□ -2.73
snR38snR38 YML108WQ03759 105 aa-1.99□□□□□ -2.73
snR38snR38 SME1Q12330 94 aaPredicted RBP-1.99□□□□□ -2.73
snR38snR38 RPP0P05317 312 aaKnown RBP-2□□□□□ -2.73
snR38snR38 SHB17P36136 271 aaKnown RBP-2□□□□□ -2.73
snR38snR38 SKG1P36169 355 aa-2□□□□□ -2.73
snR38snR38 YDR286CQ05530 114 aa-2□□□□□ -2.73
snR38snR38 GET4Q12125 312 aa-2□□□□□ -2.73
snR38snR38 YOR342CQ12182 319 aa-2□□□□□ -2.73
snR38snR38 FRE6Q12473 712 aa-2□□□□□ -2.73
snR38snR38 YAR023CD6VPM8 179 aa-2.01□□□□□ -2.73
snR38snR38 OM45P16547 393 aa-2.01□□□□□ -2.73
snR38snR38 CDC10P25342 322 aaKnown RBP-2.01□□□□□ -2.73
snR38snR38 DAD2P36162 133 aa-2.01□□□□□ -2.73
snR38snR38 POG1P40473 351 aa-2.01□□□□□ -2.73
snR38snR38 CAT5P41735 233 aa-2.01□□□□□ -2.73
snR38snR38 SNZ3P43545 298 aa-2.01□□□□□ -2.73
snR38snR38 SRB7P47822 140 aa-2.01□□□□□ -2.73
snR38snR38 NUP84P52891 726 aa-2.01□□□□□ -2.73
snR38snR38 THG1P53215 237 aaKnown RBP-2.01□□□□□ -2.73
snR38snR38 SPT7P35177 1332 aa-2.01□□□□□ -2.73
snR38snR38 INH1P01097 85 aa-2.02□□□□□ -2.73
snR38snR38 VPS3P23643 1011 aa-2.02□□□□□ -2.73
snR38snR38 APS1P35181 156 aa-2.02□□□□□ -2.73
snR38snR38 ETR1P38071 380 aa-2.02□□□□□ -2.73
snR38snR38 JEM1P40358 645 aa-2.02□□□□□ -2.73
snR38snR38 YGL230CP53074 147 aa-2.02□□□□□ -2.73
snR38snR38 ALG13P53178 202 aa-2.02□□□□□ -2.73
snR38snR38 LAP3Q01532 483 aaKnown RBP RIP-Chip data-2.02□□□□□ -2.73not detected
snR38snR38 HRD1Q08109 551 aa-2.02□□□□□ -2.73
snR38snR38 PAA1Q12447 191 aaKnown RBP-2.02□□□□□ -2.73
snR38snR38 CAR2P07991 424 aaKnown RBP-2.03□□□□□ -2.73
snR38snR38 YBL010CP32788 280 aa-2.03□□□□□ -2.73
snR38snR38 GSP2P32836 220 aaKnown RBP-2.03□□□□□ -2.73
snR38snR38 RIB7P33312 244 aa-2.03□□□□□ -2.73
snR38snR38 BLI1P35727 113 aa-2.03□□□□□ -2.73
snR38snR38 POP4P38336 279 aa-2.03□□□□□ -2.73
snR38snR38 ATX1P38636 73 aa-2.03□□□□□ -2.73
snR38snR38 LIN1P38852 340 aaPredicted RBP-2.03□□□□□ -2.73
snR38snR38 AST2P39945 430 aaKnown RBP-2.03□□□□□ -2.73
snR38snR38 GDI1P39958 451 aaKnown RBP-2.03□□□□□ -2.73
snR38snR38 SPG4Q04438 115 aa-2.03□□□□□ -2.73
snR38snR38 TAL1P15019 335 aaKnown RBP-2.04□□□□□ -2.74
snR38snR38 STE18P18852 110 aa-2.04□□□□□ -2.74
Retrieved 100 of 5,963 RNA–protein pairs in 107.7 ms