RNA–Protein interactions for RNA: snR11

snR11, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR11, Length 258 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR11snR11 PST1Q12355 444 aa2.47□□□□□ -2.01
snR11snR11 YFR032C-BQ8TGU2 87 aa2.47□□□□□ -2.01
snR11snR11 SIR2P06700 562 aa2.46□□□□□ -2.02
snR11snR11 DPM1P14020 267 aaKnown RBP2.46□□□□□ -2.02
snR11snR11 FCY2P17064 533 aa2.46□□□□□ -2.02
snR11snR11 SFC1P33303 322 aa2.46□□□□□ -2.02
snR11snR11 YPT52P36018 234 aaKnown RBP2.46□□□□□ -2.02
snR11snR11 ILM1P47155 203 aa2.46□□□□□ -2.02
snR11snR11 COG5P53951 403 aa2.46□□□□□ -2.02
snR11snR11 YDC1Q02896 317 aa2.46□□□□□ -2.02
snR11snR11 LPP1Q04396 274 aa2.46□□□□□ -2.02
snR11snR11 HRT1Q08273 121 aa2.46□□□□□ -2.02
snR11snR11 YPL257WQ08974 193 aa2.46□□□□□ -2.02
snR11snR11 BBP1Q12365 385 aa2.46□□□□□ -2.02
snR11snR11 YEL009C-AA0A023PZF2 135 aa2.45□□□□□ -2.02
snR11snR11 RAD10P06838 210 aa2.45□□□□□ -2.02
snR11snR11 SGA1P08019 549 aa2.45□□□□□ -2.02
snR11snR11 YPR170W-BP0C5R9 85 aa2.45□□□□□ -2.02
snR11snR11 RNP1P32385 249 aa2.45□□□□□ -2.02
snR11snR11 SEC17P32602 292 aa2.45□□□□□ -2.02
snR11snR11 RCN1P36054 211 aa2.45□□□□□ -2.02
snR11snR11 EDC3P39998 551 aaKnown RBP2.45□□□□□ -2.02
snR11snR11 YFR045WP43617 309 aa2.45□□□□□ -2.02
snR11snR11 YJL144WP47009 104 aa2.45□□□□□ -2.02
snR11snR11 PRM8P53174 237 aa2.45□□□□□ -2.02
snR11snR11 ALG9P53868 555 aaKnown RBP2.45□□□□□ -2.02
snR11snR11 YLR036CQ07986 203 aa2.45□□□□□ -2.02
snR11snR11 YLR050CQ12155 161 aaKnown RBP2.45□□□□□ -2.02
snR11snR11 IES3Q12345 250 aa2.45□□□□□ -2.02
snR11snR11 ISD11Q6Q560 94 aa2.45□□□□□ -2.02
snR11snR11 PET20Q99373 253 aa2.45□□□□□ -2.02
snR11snR11 RPL25P04456 142 aaKnown RBP2.44□□□□□ -2.02
snR11snR11 RPS28BP0C0X0 67 aaKnown RBP2.44□□□□□ -2.02
snR11snR11 YCR023CP25351 611 aa2.44□□□□□ -2.02
snR11snR11 YBR063CP38083 404 aa2.44□□□□□ -2.02
snR11snR11 NVJ1P38881 321 aa2.44□□□□□ -2.02
snR11snR11 RMD6P39975 231 aa2.44□□□□□ -2.02
snR11snR11 ICE2P40499 491 aa2.44□□□□□ -2.02
snR11snR11 YFH7P43591 353 aa2.44□□□□□ -2.02
snR11snR11 MIG2P53035 382 aa2.44□□□□□ -2.02
snR11snR11 YNL010WP53981 241 aaKnown RBP2.44□□□□□ -2.02
snR11snR11 DID2P69771 204 aa2.44□□□□□ -2.02
snR11snR11 HSK3P69852 69 aa2.44□□□□□ -2.02
snR11snR11 YPL162CQ12042 273 aa2.44□□□□□ -2.02
snR11snR11 LSO2Q3E772 92 aaKnown RBP2.44□□□□□ -2.02
snR11snR11 RPS28AQ3E7X9 67 aaPredicted RBP2.44□□□□□ -2.02
snR11snR11 NUP157P40064 1391 aaKnown RBP2.44□□□□□ -2.02
snR11snR11 MBF1O14467 151 aaKnown RBP2.43□□□□□ -2.02
snR11snR11 RPS24AP0CX31 135 aaKnown RBP2.43□□□□□ -2.02
snR11snR11 RPS24BP0CX32 135 aaKnown RBP2.43□□□□□ -2.02
snR11snR11 CNB1P25296 175 aa2.43□□□□□ -2.02
snR11snR11 AHC2P25649 128 aa2.43□□□□□ -2.02
snR11snR11 MGT1P26188 188 aa2.43□□□□□ -2.02
snR11snR11 SDH4P37298 181 aa2.43□□□□□ -2.02
snR11snR11 YGP1P38616 354 aaKnown RBP2.43□□□□□ -2.02
snR11snR11 GON7P46984 123 aa2.43□□□□□ -2.02
snR11snR11 YJR111CP47148 283 aaKnown RBP2.43□□□□□ -2.02
snR11snR11 SBH2P52871 88 aa2.43□□□□□ -2.02
snR11snR11 NUP49Q02199 472 aa2.43□□□□□ -2.02
snR11snR11 ABF2Q02486 183 aa2.43□□□□□ -2.02
snR11snR11 NSL1Q12143 216 aa2.43□□□□□ -2.02
snR11snR11 RDI1Q12434 202 aa2.43□□□□□ -2.02
snR11snR11 YOR020W-AQ3E824 90 aa2.43□□□□□ -2.02
snR11snR11 YLR156WP0CE96 114 aa2.42□□□□□ -2.02
snR11snR11 YLR159WP0CE97 114 aa2.42□□□□□ -2.02
snR11snR11 YLR161WP0CE98 114 aa2.42□□□□□ -2.02
snR11snR11 CTR2P38865 189 aa2.42□□□□□ -2.02
snR11snR11 HMF1P40037 129 aaKnown RBP2.42□□□□□ -2.02
snR11snR11 LSM4P40070 187 aaKnown RBP2.42□□□□□ -2.02
snR11snR11 ARP3P47117 449 aaKnown RBP2.42□□□□□ -2.02
snR11snR11 SOL1P50278 321 aa2.42□□□□□ -2.02
snR11snR11 ARO8P53090 500 aaKnown RBP2.42□□□□□ -2.02
snR11snR11 NQM1P53228 333 aaPredicted RBP2.42□□□□□ -2.02
snR11snR11 YMD8Q03697 442 aa2.42□□□□□ -2.02
snR11snR11 RRP17Q04031 235 aaPredicted RBP2.42□□□□□ -2.02
snR11snR11 TRM12Q04235 462 aa2.42□□□□□ -2.02
snR11snR11 PEX12Q04370 399 aa2.42□□□□□ -2.02
snR11snR11 MCP1Q12106 302 aa2.42□□□□□ -2.02
snR11snR11 PEX11Q12462 236 aa2.42□□□□□ -2.02
snR11snR11 HIS3P06633 220 aa2.41□□□□□ -2.02
snR11snR11 PET9P18239 318 aaKnown RBP2.41□□□□□ -2.02
snR11snR11 SCO1P23833 295 aa2.41□□□□□ -2.02
snR11snR11 UBC8P28263 218 aa2.41□□□□□ -2.02
snR11snR11 KDX1P36005 433 aa2.41□□□□□ -2.02
snR11snR11 YHR125WP38831 101 aa2.41□□□□□ -2.02
snR11snR11 PRM10P42946 383 aa2.41□□□□□ -2.02
snR11snR11 SMD3P43321 101 aaKnown RBP2.41□□□□□ -2.02
snR11snR11 AIM34Q03673 198 aa2.41□□□□□ -2.02
snR11snR11 YDR249CQ03787 373 aa2.41□□□□□ -2.02
snR11snR11 ATG39Q06159 398 aa2.41□□□□□ -2.02
snR11snR11 YPR127WQ06494 345 aa2.41□□□□□ -2.02
snR11snR11 YOR268CQ08734 132 aa2.41□□□□□ -2.02
snR11snR11 YDL085C-AQ3E7B7 68 aaKnown RBP2.41□□□□□ -2.02
snR11snR11 MAG1P22134 296 aaKnown RBP2.4□□□□□ -2.03
snR11snR11 ATG22P25568 528 aa2.4□□□□□ -2.03
snR11snR11 MDH3P32419 343 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
snR11snR11 YKL102CP34249 101 aa2.4□□□□□ -2.03
snR11snR11 FMP23P38231 175 aa2.4□□□□□ -2.03
snR11snR11 POP4P38336 279 aa2.4□□□□□ -2.03
snR11snR11 COS8P38723 381 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms