RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W SYM1Q06563 197 aa3.24□□□□□ -1.89
ROD1YOR018W RRS1Q08746 203 aaKnown RBP3.24□□□□□ -1.89
ROD1YOR018W NAM2P11325 894 aa3.23□□□□□ -1.89
ROD1YOR018W YCR016WP25617 290 aaKnown RBP3.23□□□□□ -1.89
ROD1YOR018W DAL80P26343 269 aa3.23□□□□□ -1.89
ROD1YOR018W SHM2P37291 469 aaKnown RBP3.23□□□□□ -1.89
ROD1YOR018W RMD6P39975 231 aa3.23□□□□□ -1.89
ROD1YOR018W SSN8P47821 323 aa3.23□□□□□ -1.89
ROD1YOR018W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
ROD1YOR018W YDR391CQ04170 232 aa3.23□□□□□ -1.89
ROD1YOR018W DLT1Q04216 342 aa3.23□□□□□ -1.89
ROD1YOR018W MRX9Q07349 420 aaKnown RBP3.23□□□□□ -1.89
ROD1YOR018W YOR385WQ08909 290 aa3.23□□□□□ -1.89
ROD1YOR018W PET20Q99373 253 aa3.23□□□□□ -1.89
ROD1YOR018W SEC22P22214 214 aa3.23□□□□□ -1.89
ROD1YOR018W MRP17P28778 131 aa3.23□□□□□ -1.89
ROD1YOR018W PEX4P29340 183 aa3.23□□□□□ -1.89
ROD1YOR018W ARC40P38328 384 aaKnown RBP3.23□□□□□ -1.89
ROD1YOR018W YGP1P38616 354 aaKnown RBP3.23□□□□□ -1.89
ROD1YOR018W EGT2P42835 1041 aa3.23□□□□□ -1.89
ROD1YOR018W SLX9P53251 210 aaPredicted RBP3.23□□□□□ -1.89
ROD1YOR018W YNR071CP53757 342 aa3.23□□□□□ -1.89
ROD1YOR018W TEX1P53851 422 aaKnown RBP3.23□□□□□ -1.89
ROD1YOR018W APJ1P53940 528 aa3.23□□□□□ -1.89
ROD1YOR018W RRT7Q07829 113 aa3.23□□□□□ -1.89
ROD1YOR018W FRE8Q12209 686 aa3.23□□□□□ -1.89
ROD1YOR018W ARG80P07249 177 aa3.22□□□□□ -1.89
ROD1YOR018W SSA3P09435 649 aaKnown RBP3.22□□□□□ -1.89
ROD1YOR018W RPL43AP0CX25 92 aaKnown RBP3.22□□□□□ -1.89
ROD1YOR018W RPL43BP0CX26 92 aa3.22□□□□□ -1.89
ROD1YOR018W FRS1P15624 595 aaKnown RBP3.22□□□□□ -1.89
ROD1YOR018W ACB1P31787 87 aa3.22□□□□□ -1.89
ROD1YOR018W RPB7P34087 171 aa3.22□□□□□ -1.89
ROD1YOR018W MRPL3P36516 390 aa3.22□□□□□ -1.89
ROD1YOR018W SLM1P40485 686 aa3.22□□□□□ -1.89
ROD1YOR018W PEF1P53238 335 aa3.22□□□□□ -1.89
ROD1YOR018W CRH1P53301 507 aa3.22□□□□□ -1.89
ROD1YOR018W SLI1P53304 468 aa3.22□□□□□ -1.89
ROD1YOR018W YMR130WQ04223 302 aa3.22□□□□□ -1.89
ROD1YOR018W SNA4Q07549 140 aa3.22□□□□□ -1.89
ROD1YOR018W FCY22Q12119 530 aa3.22□□□□□ -1.89
ROD1YOR018W USB1Q12208 290 aaKnown RBP3.22□□□□□ -1.89
ROD1YOR018W TRR1P29509 319 aaKnown RBP3.22□□□□□ -1.89
ROD1YOR018W MRP20P32387 263 aa3.22□□□□□ -1.89
ROD1YOR018W PAC2P39937 518 aa3.22□□□□□ -1.89
ROD1YOR018W QRI1P43123 477 aaKnown RBP3.22□□□□□ -1.89
ROD1YOR018W TAD2P47058 250 aa3.22□□□□□ -1.89
ROD1YOR018W XPT1P47165 209 aa3.22□□□□□ -1.89
ROD1YOR018W TAF4P50105 388 aa3.22□□□□□ -1.89
ROD1YOR018W RTT103Q05543 409 aa3.22□□□□□ -1.89
ROD1YOR018W YLR224WQ05947 369 aa3.22□□□□□ -1.89
ROD1YOR018W PIN3Q06449 215 aa3.22□□□□□ -1.89
ROD1YOR018W SWT1Q12104 458 aa3.22□□□□□ -1.89
ROD1YOR018W TRM13Q12383 476 aa3.22□□□□□ -1.89
ROD1YOR018W HUG1Q6Q5K6 68 aa3.22□□□□□ -1.89
ROD1YOR018W YMR105W-AQ8TGS8 64 aa3.22□□□□□ -1.89
ROD1YOR018W FSH3Q99369 266 aa3.22□□□□□ -1.89
ROD1YOR018W UTP20P35194 2493 aaKnown RBP3.21□□□□□ -1.9
ROD1YOR018W MET3P08536 511 aa3.21□□□□□ -1.9
ROD1YOR018W MSS1P32559 526 aaPredicted RBP3.21□□□□□ -1.9
ROD1YOR018W YOX1P34161 385 aa3.21□□□□□ -1.9
ROD1YOR018W RRF1P38771 230 aa3.21□□□□□ -1.9
ROD1YOR018W GEP4P38812 185 aa3.21□□□□□ -1.9
ROD1YOR018W SSO2P39926 295 aa3.21□□□□□ -1.9
ROD1YOR018W YIR035CP40579 254 aa3.21□□□□□ -1.9
ROD1YOR018W GLR1P41921 483 aaKnown RBP3.21□□□□□ -1.9
ROD1YOR018W JAC1P53193 184 aa3.21□□□□□ -1.9
ROD1YOR018W RFM1Q12192 310 aa3.21□□□□□ -1.9
ROD1YOR018W YCL048W-AQ2V2Q2 79 aa3.21□□□□□ -1.9
ROD1YOR018W PUT1P09368 476 aa3.21□□□□□ -1.9
ROD1YOR018W ERG2P32352 222 aa3.21□□□□□ -1.9
ROD1YOR018W NAT2P37293 288 aa3.21□□□□□ -1.9
ROD1YOR018W BFR1P38934 470 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
ROD1YOR018W GNA1P43577 159 aaPredicted RBP3.21□□□□□ -1.9
ROD1YOR018W PIR5P46999 287 aa3.21□□□□□ -1.9
ROD1YOR018W ACS1Q01574 713 aa3.21□□□□□ -1.9
ROD1YOR018W YDC1Q02896 317 aa3.21□□□□□ -1.9
ROD1YOR018W RFU1Q08003 200 aa3.21□□□□□ -1.9
ROD1YOR018W PRM4Q12498 284 aa3.21□□□□□ -1.9
ROD1YOR018W URA3P03962 267 aa3.2□□□□□ -1.9
ROD1YOR018W MIR1P23641 311 aaKnown RBP3.2□□□□□ -1.9
ROD1YOR018W YCR061WP25639 631 aa3.2□□□□□ -1.9
ROD1YOR018W ORM1P53224 222 aa3.2□□□□□ -1.9
ROD1YOR018W WSC2P53832 503 aa3.2□□□□□ -1.9
ROD1YOR018W THI74Q04083 370 aa3.2□□□□□ -1.9
ROD1YOR018W RIM9Q04734 239 aa3.2□□□□□ -1.9
ROD1YOR018W TFC7Q12415 435 aa3.2□□□□□ -1.9
ROD1YOR018W YBR255C-AQ3E776 120 aa3.2□□□□□ -1.9
ROD1YOR018W UBA3Q99344 299 aa3.2□□□□□ -1.9
ROD1YOR018W OLE1P21147 510 aaKnown RBP3.2□□□□□ -1.9
ROD1YOR018W RFA3P26755 122 aaKnown RBP3.2□□□□□ -1.9
ROD1YOR018W YBR096WP38256 230 aa3.2□□□□□ -1.9
ROD1YOR018W PCL7P40186 285 aa3.2□□□□□ -1.9
ROD1YOR018W MRX5P47007 382 aa3.2□□□□□ -1.9
ROD1YOR018W NIF3P53081 288 aa3.2□□□□□ -1.9
ROD1YOR018W MRPL50P53724 139 aa3.2□□□□□ -1.9
ROD1YOR018W INN1P53901 409 aa3.2□□□□□ -1.9
ROD1YOR018W HSK3P69852 69 aa3.2□□□□□ -1.9
ROD1YOR018W VPS28Q02767 242 aa3.2□□□□□ -1.9
ROD1YOR018W FIT1Q04433 528 aa3.2□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 75.4 ms