RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C COS8P38723 381 aa1.37□□□□□ -2.19
RPB11YOL005C YHB1P39676 399 aaKnown RBP1.37□□□□□ -2.19
RPB11YOL005C ARC15P40518 154 aaRIP-Chip data1.37□□□□□ -2.19not detected
RPB11YOL005C NOP13P53883 403 aaKnown RBP RIP-Chip data1.37□□□□□ -2.19not detected
RPB11YOL005C ARO80Q04052 950 aa1.37□□□□□ -2.19
RPB11YOL005C MSH5Q12175 901 aa1.37□□□□□ -2.19
RPB11YOL005C YCT1Q12235 531 aa1.37□□□□□ -2.19
RPB11YOL005C YLR422WQ06409 1932 aa1.36□□□□□ -2.19
RPB11YOL005C IPP1P00817 287 aaKnown RBP1.36□□□□□ -2.19
RPB11YOL005C CDC33P07260 213 aaKnown RBP1.36□□□□□ -2.19
RPB11YOL005C PUT1P09368 476 aa1.36□□□□□ -2.19
RPB11YOL005C RPL40AP0CH08 128 aaKnown RBP1.36□□□□□ -2.19
RPB11YOL005C RPL40BP0CH09 128 aaKnown RBP1.36□□□□□ -2.19
RPB11YOL005C ERG24P32462 438 aaKnown RBP1.36□□□□□ -2.19
RPB11YOL005C VMA11P32842 164 aa1.36□□□□□ -2.19
RPB11YOL005C RPT5P33297 434 aaKnown RBP1.36□□□□□ -2.19
RPB11YOL005C YKT6P36015 200 aaKnown RBP1.36□□□□□ -2.19
RPB11YOL005C YOR062CP36025 268 aa1.36□□□□□ -2.19
RPB11YOL005C GRE3P38715 327 aaKnown RBP RIP-Chip data1.36□□□□□ -2.19not detected
RPB11YOL005C GOS1P38736 223 aa1.36□□□□□ -2.19
RPB11YOL005C YHR125WP38831 101 aa1.36□□□□□ -2.19
RPB11YOL005C BFR1P38934 470 aaKnown RBP RIP-Chip data1.36□□□□□ -2.19not detected
RPB11YOL005C YJL027CP47063 138 aaPredicted RBP1.36□□□□□ -2.19
RPB11YOL005C MRPL50P53724 139 aa1.36□□□□□ -2.19
RPB11YOL005C YDR278CQ05612 105 aa1.36□□□□□ -2.19
RPB11YOL005C FMP27Q06179 2628 aa1.36□□□□□ -2.19
RPB11YOL005C YLR173WQ06247 608 aa1.36□□□□□ -2.19
RPB11YOL005C ATG10Q07879 167 aa1.36□□□□□ -2.19
RPB11YOL005C DDP1Q99321 188 aaKnown RBP1.36□□□□□ -2.19
RPB11YOL005C RIF1P29539 1916 aa1.35□□□□□ -2.19
RPB11YOL005C YLR462WO13556 202 aa1.35□□□□□ -2.19
RPB11YOL005C EHD3P28817 500 aa1.35□□□□□ -2.19
RPB11YOL005C SCM4P32564 187 aa1.35□□□□□ -2.19
RPB11YOL005C DOA4P32571 926 aa1.35□□□□□ -2.19
RPB11YOL005C SRX1P36077 127 aa1.35□□□□□ -2.19
RPB11YOL005C YHR127WP38833 243 aaKnown RBP1.35□□□□□ -2.19
RPB11YOL005C CIS3P47001 227 aa1.35□□□□□ -2.19
RPB11YOL005C YJR079WP47126 109 aa1.35□□□□□ -2.19
RPB11YOL005C JHD2P47156 728 aaPredicted RBP1.35□□□□□ -2.19
RPB11YOL005C YGL159WP53110 370 aa1.35□□□□□ -2.19
RPB11YOL005C PAM18Q07914 168 aa1.35□□□□□ -2.19
RPB11YOL005C YOR186WQ08560 144 aa1.35□□□□□ -2.19
RPB11YOL005C MED4Q12343 284 aa1.35□□□□□ -2.19
RPB11YOL005C ATO3Q12359 275 aa1.35□□□□□ -2.19
RPB11YOL005C LAA1P39526 2014 aa1.35□□□□□ -2.19
RPB11YOL005C SEN1Q00416 2231 aaKnown RBP1.35□□□□□ -2.19
RPB11YOL005C IRA1P18963 3092 aa1.34□□□□□ -2.19
RPB11YOL005C DSF1P0CX08 502 aa1.34□□□□□ -2.19
RPB11YOL005C YNR073CP0CX09 502 aa1.34□□□□□ -2.19
RPB11YOL005C EDC3P39998 551 aaKnown RBP1.34□□□□□ -2.19
RPB11YOL005C PIR1Q03178 341 aa1.34□□□□□ -2.19
RPB11YOL005C PRM15Q03262 622 aa1.34□□□□□ -2.19
RPB11YOL005C SWC7Q06707 132 aa1.34□□□□□ -2.19
RPB11YOL005C YLR030WQ07967 263 aa1.34□□□□□ -2.19
RPB11YOL005C YPL257WQ08974 193 aa1.34□□□□□ -2.19
RPB11YOL005C YLR046CQ12253 270 aa1.34□□□□□ -2.19
RPB11YOL005C YLR126CQ12288 251 aa1.34□□□□□ -2.19
RPB11YOL005C GIS3Q12418 502 aa1.34□□□□□ -2.19
RPB11YOL005C SEY1Q99287 776 aa1.34□□□□□ -2.19
RPB11YOL005C TRA1P38811 3744 aa1.33□□□□□ -2.2
RPB11YOL005C COX5AP00424 153 aa1.33□□□□□ -2.2
RPB11YOL005C Q0255P03881 472 aa1.33□□□□□ -2.2
RPB11YOL005C ADH3P07246 375 aaKnown RBP1.33□□□□□ -2.2
RPB11YOL005C FPR1P20081 114 aaKnown RBP1.33□□□□□ -2.2
RPB11YOL005C CCA1P21269 546 aa1.33□□□□□ -2.2
RPB11YOL005C MEI4P29467 408 aa1.33□□□□□ -2.2
RPB11YOL005C KDX1P36005 433 aa1.33□□□□□ -2.2
RPB11YOL005C YEL028WP39989 153 aa1.33□□□□□ -2.2
RPB11YOL005C THO1P40040 218 aaKnown RBP1.33□□□□□ -2.2
RPB11YOL005C YMR144WP40214 342 aaKnown RBP1.33□□□□□ -2.2
RPB11YOL005C HOP2P53187 214 aa1.33□□□□□ -2.2
RPB11YOL005C YGR026WP53217 278 aa1.33□□□□□ -2.2
RPB11YOL005C RRN5Q02983 363 aa1.33□□□□□ -2.2
RPB11YOL005C YML096WQ04489 525 aa1.33□□□□□ -2.2
RPB11YOL005C FAR8Q05040 523 aa1.33□□□□□ -2.2
RPB11YOL005C CSM4Q08955 156 aa1.33□□□□□ -2.2
RPB11YOL005C PEX11Q12462 236 aa1.33□□□□□ -2.2
RPB11YOL005C EFG1Q3E705 233 aaKnown RBP1.33□□□□□ -2.2
RPB11YOL005C TOR1P35169 2470 aa1.33□□□□□ -2.2
RPB11YOL005C YBR056W-AI2HB52 66 aa1.32□□□□□ -2.2
RPB11YOL005C YAR068WP39564 161 aa1.32□□□□□ -2.2
RPB11YOL005C FCY21P40039 528 aa1.32□□□□□ -2.2
RPB11YOL005C LSM4P40070 187 aaKnown RBP1.32□□□□□ -2.2
RPB11YOL005C YMR279CQ03263 540 aa1.32□□□□□ -2.2
RPB11YOL005C DCR2Q05924 578 aa1.32□□□□□ -2.2
RPB11YOL005C YPR114WQ06107 315 aa1.32□□□□□ -2.2
RPB11YOL005C ATG39Q06159 398 aa1.32□□□□□ -2.2
RPB11YOL005C AKR2Q12013 749 aa1.32□□□□□ -2.2
RPB11YOL005C ATG31Q12421 196 aa1.32□□□□□ -2.2
RPB11YOL005C OCA6Q12454 224 aa1.32□□□□□ -2.2
RPB11YOL005C NUM1Q00402 2748 aa1.32□□□□□ -2.2
RPB11YOL005C CSF1Q12150 2958 aa1.32□□□□□ -2.2
RPB11YOL005C NSP1P14907 823 aaKnown RBP1.31□□□□□ -2.2
RPB11YOL005C YCR016WP25617 290 aaKnown RBP1.31□□□□□ -2.2
RPB11YOL005C SRB4P32569 687 aa1.31□□□□□ -2.2
RPB11YOL005C MSN4P33749 630 aa1.31□□□□□ -2.2
RPB11YOL005C LDB7P38210 180 aa1.31□□□□□ -2.2
RPB11YOL005C HYR1P40581 163 aaKnown RBP1.31□□□□□ -2.2
RPB11YOL005C SMD3P43321 101 aaKnown RBP1.31□□□□□ -2.2
RPB11YOL005C YFR054CP43622 192 aa1.31□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 49 ms