RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W LPP1Q04396 274 aa2.4□□□□□ -2.03
TRM112YNR046W ARR2Q06597 130 aa2.4□□□□□ -2.03
TRM112YNR046W VPS68Q12016 184 aa2.4□□□□□ -2.03
TRM112YNR046W SKG1P36169 355 aa2.39□□□□□ -2.03
TRM112YNR046W RMD6P39975 231 aa2.39□□□□□ -2.03
TRM112YNR046W COS6P53344 381 aa2.39□□□□□ -2.03
TRM112YNR046W MDM32Q12171 622 aa2.39□□□□□ -2.03
TRM112YNR046W CMC2Q3E7A4 109 aa2.39□□□□□ -2.03
TRM112YNR046W TDA8Q6B2U8 126 aa2.39□□□□□ -2.03
TRM112YNR046W CDC8P00572 216 aa2.38□□□□□ -2.03
TRM112YNR046W MSW1P04803 379 aa2.38□□□□□ -2.03
TRM112YNR046W PUT1P09368 476 aa2.38□□□□□ -2.03
TRM112YNR046W SCO1P23833 295 aa2.38□□□□□ -2.03
TRM112YNR046W SPS18P32572 300 aa2.38□□□□□ -2.03
TRM112YNR046W MAK5P38112 773 aaPredicted RBP2.38□□□□□ -2.03
TRM112YNR046W POP4P38336 279 aa2.38□□□□□ -2.03
TRM112YNR046W GRE3P38715 327 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
TRM112YNR046W MED6P38782 295 aa2.38□□□□□ -2.03
TRM112YNR046W NOP19P53317 196 aaPredicted RBP2.38□□□□□ -2.03
TRM112YNR046W FUS2Q05670 677 aa2.38□□□□□ -2.03
TRM112YNR046W BRX1Q08235 291 aaKnown RBP2.38□□□□□ -2.03
TRM112YNR046W YCL012CQ8J0M4 134 aa2.38□□□□□ -2.03
TRM112YNR046W QCR7P00128 127 aa2.37□□□□□ -2.03
TRM112YNR046W RPL25P04456 142 aaKnown RBP2.37□□□□□ -2.03
TRM112YNR046W SEC4P07560 215 aaKnown RBP2.37□□□□□ -2.03
TRM112YNR046W TCA17P32613 152 aa2.37□□□□□ -2.03
TRM112YNR046W MRPL28P36527 147 aa2.37□□□□□ -2.03
TRM112YNR046W CTR2P38865 189 aa2.37□□□□□ -2.03
TRM112YNR046W SMD3P43321 101 aaKnown RBP2.37□□□□□ -2.03
TRM112YNR046W MNN5P46982 586 aa2.37□□□□□ -2.03
TRM112YNR046W RRP17Q04031 235 aaPredicted RBP2.37□□□□□ -2.03
TRM112YNR046W GIM5Q04493 163 aa2.37□□□□□ -2.03
TRM112YNR046W EMC6Q12431 108 aa2.37□□□□□ -2.03
TRM112YNR046W PSF1Q12488 208 aa2.37□□□□□ -2.03
TRM112YNR046W RAD9P14737 1309 aa2.37□□□□□ -2.03
TRM112YNR046W GRX2P17695 143 aaKnown RBP2.36□□□□□ -2.03
TRM112YNR046W APA2P22108 325 aa2.36□□□□□ -2.03
TRM112YNR046W EGD2P38879 174 aaKnown RBP2.36□□□□□ -2.03
TRM112YNR046W AST2P39945 430 aaKnown RBP2.36□□□□□ -2.03
TRM112YNR046W MMS2P53152 137 aa2.36□□□□□ -2.03
TRM112YNR046W YGR219WP53307 113 aa2.36□□□□□ -2.03
TRM112YNR046W LSM7P53905 115 aaKnown RBP2.36□□□□□ -2.03
TRM112YNR046W GAS3Q03655 524 aa2.36□□□□□ -2.03
TRM112YNR046W ATO3Q12359 275 aa2.36□□□□□ -2.03
TRM112YNR046W REP2P03872 296 aa2.35□□□□□ -2.03
TRM112YNR046W CDC7P06243 507 aa2.35□□□□□ -2.03
TRM112YNR046W YLR156WP0CE96 114 aa2.35□□□□□ -2.03
TRM112YNR046W YLR159WP0CE97 114 aa2.35□□□□□ -2.03
TRM112YNR046W YLR161WP0CE98 114 aa2.35□□□□□ -2.03
TRM112YNR046W YGR050CP53231 118 aa2.35□□□□□ -2.03
TRM112YNR046W PTM1P32857 523 aa2.34□□□□□ -2.03
TRM112YNR046W PET191Q02772 108 aa2.34□□□□□ -2.03
TRM112YNR046W NEJ1Q06148 342 aa2.34□□□□□ -2.03
TRM112YNR046W FAB1P34756 2278 aa2.33□□□□□ -2.04
TRM112YNR046W MAG1P22134 296 aaKnown RBP2.33□□□□□ -2.04
TRM112YNR046W ATP7P30902 174 aa2.33□□□□□ -2.04
TRM112YNR046W MDH3P32419 343 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
TRM112YNR046W UBC6P33296 250 aaPredicted RBP2.33□□□□□ -2.04
TRM112YNR046W YOR062CP36025 268 aa2.33□□□□□ -2.04
TRM112YNR046W CIS3P47001 227 aa2.33□□□□□ -2.04
TRM112YNR046W AIM25P47140 327 aa2.33□□□□□ -2.04
TRM112YNR046W COG5P53951 403 aa2.33□□□□□ -2.04
TRM112YNR046W RGM1Q00453 211 aa2.33□□□□□ -2.04
TRM112YNR046W GPM2Q12008 311 aa2.33□□□□□ -2.04
TRM112YNR046W YOR283WQ12040 230 aaKnown RBP2.33□□□□□ -2.04
TRM112YNR046W YPL162CQ12042 273 aa2.33□□□□□ -2.04
TRM112YNR046W YHR214C-EQ8TGK0 99 aa2.33□□□□□ -2.04
TRM112YNR046W RPL35AP0CX84 120 aaKnown RBP2.32□□□□□ -2.04
TRM112YNR046W RPL35BP0CX85 120 aaKnown RBP2.32□□□□□ -2.04
TRM112YNR046W SNF6P18888 332 aa2.32□□□□□ -2.04
TRM112YNR046W MRPS28P21771 286 aa2.32□□□□□ -2.04
TRM112YNR046W ADE1P27616 306 aa2.32□□□□□ -2.04
TRM112YNR046W VPS51P36116 164 aa2.32□□□□□ -2.04
TRM112YNR046W HMF1P40037 129 aaKnown RBP2.32□□□□□ -2.04
TRM112YNR046W ERG10P41338 398 aaKnown RBP2.32□□□□□ -2.04
TRM112YNR046W AIF1P52923 378 aa2.32□□□□□ -2.04
TRM112YNR046W DAD3P69850 94 aa2.32□□□□□ -2.04
TRM112YNR046W SWP1Q02795 286 aa2.32□□□□□ -2.04
TRM112YNR046W TRM12Q04235 462 aa2.32□□□□□ -2.04
TRM112YNR046W TSC3Q3E790 80 aa2.32□□□□□ -2.04
TRM112YNR046W FKS1P38631 1876 aaKnown RBP2.31□□□□□ -2.04
TRM112YNR046W URA5P13298 226 aaKnown RBP2.31□□□□□ -2.04
TRM112YNR046W BET1P22804 142 aa2.31□□□□□ -2.04
TRM112YNR046W SEC17P32602 292 aa2.31□□□□□ -2.04
TRM112YNR046W CAF4P36130 643 aa2.31□□□□□ -2.04
TRM112YNR046W PGD1P40356 397 aa2.31□□□□□ -2.04
TRM112YNR046W TMA22P47089 198 aaPredicted RBP2.31□□□□□ -2.04
TRM112YNR046W CGI121Q03705 181 aaKnown RBP2.31□□□□□ -2.04
TRM112YNR046W SPC2Q04969 178 aa2.31□□□□□ -2.04
TRM112YNR046W YOL160WQ08321 113 aa2.31□□□□□ -2.04
TRM112YNR046W YNG1Q08465 219 aa2.31□□□□□ -2.04
TRM112YNR046W SIR2P06700 562 aa2.3□□□□□ -2.04
TRM112YNR046W SEN2P16658 377 aa2.3□□□□□ -2.04
TRM112YNR046W UTP30P36144 274 aaKnown RBP2.3□□□□□ -2.04
TRM112YNR046W POP7P38291 140 aa2.3□□□□□ -2.04
TRM112YNR046W ERV15P38312 142 aa2.3□□□□□ -2.04
TRM112YNR046W SHG1P38337 142 aa2.3□□□□□ -2.04
TRM112YNR046W SEC72P39742 193 aaKnown RBP2.3□□□□□ -2.04
TRM112YNR046W YKE4P40544 346 aa2.3□□□□□ -2.04
TRM112YNR046W MRPS8Q03799 155 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 417.2 ms