RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W LPP1Q04396 274 aa2.4□□□□□ -2.03
TRM112YNR046W ARR2Q06597 130 aa2.4□□□□□ -2.03
TRM112YNR046W VPS68Q12016 184 aa2.4□□□□□ -2.03
TRM112YNR046W SKG1P36169 355 aa2.39□□□□□ -2.03
TRM112YNR046W RMD6P39975 231 aa2.39□□□□□ -2.03
TRM112YNR046W COS6P53344 381 aa2.39□□□□□ -2.03
TRM112YNR046W MDM32Q12171 622 aa2.39□□□□□ -2.03
TRM112YNR046W CMC2Q3E7A4 109 aa2.39□□□□□ -2.03
TRM112YNR046W TDA8Q6B2U8 126 aa2.39□□□□□ -2.03
TRM112YNR046W CDC8P00572 216 aa2.38□□□□□ -2.03
TRM112YNR046W MSW1P04803 379 aa2.38□□□□□ -2.03
TRM112YNR046W PUT1P09368 476 aa2.38□□□□□ -2.03
TRM112YNR046W SCO1P23833 295 aa2.38□□□□□ -2.03
TRM112YNR046W SPS18P32572 300 aa2.38□□□□□ -2.03
TRM112YNR046W MAK5P38112 773 aaPredicted RBP2.38□□□□□ -2.03
TRM112YNR046W POP4P38336 279 aa2.38□□□□□ -2.03
TRM112YNR046W GRE3P38715 327 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
TRM112YNR046W MED6P38782 295 aa2.38□□□□□ -2.03
TRM112YNR046W NOP19P53317 196 aaPredicted RBP2.38□□□□□ -2.03
TRM112YNR046W FUS2Q05670 677 aa2.38□□□□□ -2.03
TRM112YNR046W BRX1Q08235 291 aaKnown RBP2.38□□□□□ -2.03
TRM112YNR046W YCL012CQ8J0M4 134 aa2.38□□□□□ -2.03
TRM112YNR046W QCR7P00128 127 aa2.37□□□□□ -2.03
TRM112YNR046W RPL25P04456 142 aaKnown RBP2.37□□□□□ -2.03
TRM112YNR046W SEC4P07560 215 aaKnown RBP2.37□□□□□ -2.03
TRM112YNR046W TCA17P32613 152 aa2.37□□□□□ -2.03
TRM112YNR046W MRPL28P36527 147 aa2.37□□□□□ -2.03
TRM112YNR046W CTR2P38865 189 aa2.37□□□□□ -2.03
TRM112YNR046W SMD3P43321 101 aaKnown RBP2.37□□□□□ -2.03
TRM112YNR046W MNN5P46982 586 aa2.37□□□□□ -2.03
TRM112YNR046W RRP17Q04031 235 aaPredicted RBP2.37□□□□□ -2.03
TRM112YNR046W GIM5Q04493 163 aa2.37□□□□□ -2.03
TRM112YNR046W EMC6Q12431 108 aa2.37□□□□□ -2.03
TRM112YNR046W PSF1Q12488 208 aa2.37□□□□□ -2.03
TRM112YNR046W RAD9P14737 1309 aa2.37□□□□□ -2.03
TRM112YNR046W GRX2P17695 143 aaKnown RBP2.36□□□□□ -2.03
TRM112YNR046W APA2P22108 325 aa2.36□□□□□ -2.03
TRM112YNR046W EGD2P38879 174 aaKnown RBP2.36□□□□□ -2.03
TRM112YNR046W AST2P39945 430 aaKnown RBP2.36□□□□□ -2.03
TRM112YNR046W MMS2P53152 137 aa2.36□□□□□ -2.03
TRM112YNR046W YGR219WP53307 113 aa2.36□□□□□ -2.03
TRM112YNR046W LSM7P53905 115 aaKnown RBP2.36□□□□□ -2.03
TRM112YNR046W GAS3Q03655 524 aa2.36□□□□□ -2.03
TRM112YNR046W ATO3Q12359 275 aa2.36□□□□□ -2.03
TRM112YNR046W REP2P03872 296 aa2.35□□□□□ -2.03
TRM112YNR046W CDC7P06243 507 aa2.35□□□□□ -2.03
TRM112YNR046W YLR156WP0CE96 114 aa2.35□□□□□ -2.03
TRM112YNR046W YLR159WP0CE97 114 aa2.35□□□□□ -2.03
TRM112YNR046W YLR161WP0CE98 114 aa2.35□□□□□ -2.03
TRM112YNR046W YGR050CP53231 118 aa2.35□□□□□ -2.03
TRM112YNR046W PTM1P32857 523 aa2.34□□□□□ -2.03
TRM112YNR046W PET191Q02772 108 aa2.34□□□□□ -2.03
TRM112YNR046W NEJ1Q06148 342 aa2.34□□□□□ -2.03
TRM112YNR046W FAB1P34756 2278 aa2.33□□□□□ -2.04
TRM112YNR046W MAG1P22134 296 aaKnown RBP2.33□□□□□ -2.04
TRM112YNR046W ATP7P30902 174 aa2.33□□□□□ -2.04
TRM112YNR046W MDH3P32419 343 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
TRM112YNR046W UBC6P33296 250 aaPredicted RBP2.33□□□□□ -2.04
TRM112YNR046W YOR062CP36025 268 aa2.33□□□□□ -2.04
TRM112YNR046W CIS3P47001 227 aa2.33□□□□□ -2.04
TRM112YNR046W AIM25P47140 327 aa2.33□□□□□ -2.04
TRM112YNR046W COG5P53951 403 aa2.33□□□□□ -2.04
TRM112YNR046W RGM1Q00453 211 aa2.33□□□□□ -2.04
TRM112YNR046W GPM2Q12008 311 aa2.33□□□□□ -2.04
TRM112YNR046W YOR283WQ12040 230 aaKnown RBP2.33□□□□□ -2.04
TRM112YNR046W YPL162CQ12042 273 aa2.33□□□□□ -2.04
TRM112YNR046W YHR214C-EQ8TGK0 99 aa2.33□□□□□ -2.04
TRM112YNR046W RPL35AP0CX84 120 aaKnown RBP2.32□□□□□ -2.04
TRM112YNR046W RPL35BP0CX85 120 aaKnown RBP2.32□□□□□ -2.04
TRM112YNR046W SNF6P18888 332 aa2.32□□□□□ -2.04
TRM112YNR046W MRPS28P21771 286 aa2.32□□□□□ -2.04
TRM112YNR046W ADE1P27616 306 aa2.32□□□□□ -2.04
TRM112YNR046W VPS51P36116 164 aa2.32□□□□□ -2.04
TRM112YNR046W HMF1P40037 129 aaKnown RBP2.32□□□□□ -2.04
TRM112YNR046W ERG10P41338 398 aaKnown RBP2.32□□□□□ -2.04
TRM112YNR046W AIF1P52923 378 aa2.32□□□□□ -2.04
TRM112YNR046W DAD3P69850 94 aa2.32□□□□□ -2.04
TRM112YNR046W SWP1Q02795 286 aa2.32□□□□□ -2.04
TRM112YNR046W TRM12Q04235 462 aa2.32□□□□□ -2.04
TRM112YNR046W TSC3Q3E790 80 aa2.32□□□□□ -2.04
TRM112YNR046W FKS1P38631 1876 aaKnown RBP2.31□□□□□ -2.04
TRM112YNR046W URA5P13298 226 aaKnown RBP2.31□□□□□ -2.04
TRM112YNR046W BET1P22804 142 aa2.31□□□□□ -2.04
TRM112YNR046W SEC17P32602 292 aa2.31□□□□□ -2.04
TRM112YNR046W CAF4P36130 643 aa2.31□□□□□ -2.04
TRM112YNR046W PGD1P40356 397 aa2.31□□□□□ -2.04
TRM112YNR046W TMA22P47089 198 aaPredicted RBP2.31□□□□□ -2.04
TRM112YNR046W CGI121Q03705 181 aaKnown RBP2.31□□□□□ -2.04
TRM112YNR046W SPC2Q04969 178 aa2.31□□□□□ -2.04
TRM112YNR046W YOL160WQ08321 113 aa2.31□□□□□ -2.04
TRM112YNR046W YNG1Q08465 219 aa2.31□□□□□ -2.04
TRM112YNR046W SIR2P06700 562 aa2.3□□□□□ -2.04
TRM112YNR046W SEN2P16658 377 aa2.3□□□□□ -2.04
TRM112YNR046W UTP30P36144 274 aaKnown RBP2.3□□□□□ -2.04
TRM112YNR046W POP7P38291 140 aa2.3□□□□□ -2.04
TRM112YNR046W ERV15P38312 142 aa2.3□□□□□ -2.04
TRM112YNR046W SHG1P38337 142 aa2.3□□□□□ -2.04
TRM112YNR046W SEC72P39742 193 aaKnown RBP2.3□□□□□ -2.04
TRM112YNR046W YKE4P40544 346 aa2.3□□□□□ -2.04
TRM112YNR046W MRPS8Q03799 155 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms