RNA–Protein interactions for RNA: YNL312W

RFA2, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeast

Gene RFA2, Length 822 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RFA2	YNL312W	HTB2	P02294	131 aa		4.12	□□□□□ -1.75
RFA2	YNL312W	CUP2	P15315	225 aa		4.12	□□□□□ -1.75
RFA2	YNL312W	ADE1	P27616	306 aa		4.12	□□□□□ -1.75
RFA2	YNL312W	TRM7	P38238	310 aa	Known RBP	4.12	□□□□□ -1.75
RFA2	YNL312W	IKI1	P38874	309 aa		4.12	□□□□□ -1.75
RFA2	YNL312W	GOT1	Q03554	138 aa		4.12	□□□□□ -1.75
RFA2	YNL312W	MSA1	Q08471	629 aa		4.12	□□□□□ -1.75
RFA2	YNL312W	JLP1	Q12358	412 aa		4.12	□□□□□ -1.75
RFA2	YNL312W	YBL008W-A	Q3E821	79 aa		4.12	□□□□□ -1.75
RFA2	YNL312W	YHR139C-A	O13536	103 aa		4.11	□□□□□ -1.75
RFA2	YNL312W	QCR7	P00128	127 aa		4.11	□□□□□ -1.75
RFA2	YNL312W	RPL28	P02406	149 aa	Known RBP	4.11	□□□□□ -1.75
RFA2	YNL312W	PPH21	P23594	369 aa		4.11	□□□□□ -1.75
RFA2	YNL312W	SUR2	P38992	349 aa		4.11	□□□□□ -1.75
RFA2	YNL312W	BRR6	P53062	197 aa		4.11	□□□□□ -1.75
RFA2	YNL312W	SYF2	P53277	215 aa	Predicted RBP	4.11	□□□□□ -1.75
RFA2	YNL312W	YDR222W	Q04925	415 aa		4.11	□□□□□ -1.75
RFA2	YNL312W	MRX8	Q05473	314 aa		4.11	□□□□□ -1.75
RFA2	YNL312W	YPR011C	Q12251	326 aa		4.11	□□□□□ -1.75
RFA2	YNL312W	PRR2	Q12310	699 aa		4.11	□□□□□ -1.75
RFA2	YNL312W	YPL247C	Q12523	523 aa		4.11	□□□□□ -1.75
RFA2	YNL312W	URA6	P15700	204 aa		4.1	□□□□□ -1.75
RFA2	YNL312W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
RFA2	YNL312W	TRR2	P38816	342 aa		4.1	□□□□□ -1.75
RFA2	YNL312W	AVT2	P39981	480 aa		4.1	□□□□□ -1.75
RFA2	YNL312W	YMR144W	P40214	342 aa	Known RBP	4.1	□□□□□ -1.75
RFA2	YNL312W	FYV6	P53913	173 aa		4.1	□□□□□ -1.75
RFA2	YNL312W	YOL019W	Q08157	551 aa		4.1	□□□□□ -1.75
RFA2	YNL312W	EMP46	Q12396	444 aa		4.1	□□□□□ -1.75
RFA2	YNL312W	MET2	P08465	486 aa		4.09	□□□□□ -1.75
RFA2	YNL312W	YAK1	P14680	807 aa		4.09	□□□□□ -1.75
RFA2	YNL312W	KDX1	P36005	433 aa		4.09	□□□□□ -1.75
RFA2	YNL312W	YER034W	P40022	185 aa	Known RBP	4.09	□□□□□ -1.75
RFA2	YNL312W	PEX17	P40155	199 aa		4.09	□□□□□ -1.75
RFA2	YNL312W	YFR045W	P43617	309 aa		4.09	□□□□□ -1.75
RFA2	YNL312W	MZM1	Q03429	123 aa	Predicted RBP	4.09	□□□□□ -1.75
RFA2	YNL312W	HEM25	Q07534	307 aa		4.09	□□□□□ -1.75
RFA2	YNL312W	SMT3	Q12306	101 aa	Known RBP	4.09	□□□□□ -1.75
RFA2	YNL312W	RPL27A	P0C2H6	136 aa	Known RBP	4.08	□□□□□ -1.76
RFA2	YNL312W	RPL27B	P0C2H7	136 aa	Known RBP	4.08	□□□□□ -1.76
RFA2	YNL312W	RPL40A	P0CH08	128 aa	Known RBP	4.08	□□□□□ -1.76
RFA2	YNL312W	RPL40B	P0CH09	128 aa	Known RBP	4.08	□□□□□ -1.76
RFA2	YNL312W	TOM40	P23644	387 aa	Known RBP	4.08	□□□□□ -1.76
RFA2	YNL312W	MSB2	P32334	1306 aa		4.08	□□□□□ -1.76
RFA2	YNL312W	RSM25	P40496	264 aa		4.08	□□□□□ -1.76
RFA2	YNL312W	GET1	P53192	235 aa		4.08	□□□□□ -1.76
RFA2	YNL312W	HST4	P53688	370 aa		4.08	□□□□□ -1.76
RFA2	YNL312W	NOT5	Q12514	560 aa	Predicted RBP	4.08	□□□□□ -1.76
RFA2	YNL312W	YOL163W	P0CF20	169 aa		4.07	□□□□□ -1.76
RFA2	YNL312W	TEM1	P38987	245 aa		4.07	□□□□□ -1.76
RFA2	YNL312W	MDM34	P53083	459 aa		4.07	□□□□□ -1.76
RFA2	YNL312W	MRX4	Q12467	430 aa		4.07	□□□□□ -1.76
RFA2	YNL312W	TEL1	P38110	2787 aa		4.06	□□□□□ -1.76
RFA2	YNL312W	ZWF1	P11412	505 aa	Known RBP	4.06	□□□□□ -1.76
RFA2	YNL312W	DBF2	P22204	572 aa		4.06	□□□□□ -1.76
RFA2	YNL312W	YER189W	P40104	122 aa		4.06	□□□□□ -1.76
RFA2	YNL312W	BMT5	P40493	336 aa		4.06	□□□□□ -1.76
RFA2	YNL312W	IRC18	P47056	224 aa		4.06	□□□□□ -1.76
RFA2	YNL312W	FCF1	Q05498	189 aa	Predicted RBP	4.06	□□□□□ -1.76
RFA2	YNL312W	YLR179C	Q06252	201 aa	Known RBP	4.06	□□□□□ -1.76
RFA2	YNL312W	IES3	Q12345	250 aa		4.06	□□□□□ -1.76
RFA2	YNL312W	ISD11	Q6Q560	94 aa		4.06	□□□□□ -1.76
RFA2	YNL312W	DDP1	Q99321	188 aa	Known RBP	4.06	□□□□□ -1.76
RFA2	YNL312W	IRA2	P19158	3079 aa		4.06	□□□□□ -1.76
RFA2	YNL312W	NUM1	Q00402	2748 aa		4.05	□□□□□ -1.76
RFA2	YNL312W	CDC28	P00546	298 aa	Known RBP	4.05	□□□□□ -1.76
RFA2	YNL312W	CUP1-1	P0CX80	61 aa		4.05	□□□□□ -1.76
RFA2	YNL312W	CUP1-2	P0CX81	61 aa		4.05	□□□□□ -1.76
RFA2	YNL312W	ERG10	P41338	398 aa	Known RBP	4.05	□□□□□ -1.76
RFA2	YNL312W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
RFA2	YNL312W	SPG3	Q04398	127 aa	Predicted RBP	4.05	□□□□□ -1.76
RFA2	YNL312W	FAR8	Q05040	523 aa		4.05	□□□□□ -1.76
RFA2	YNL312W	RPL22A	P05749	121 aa	Known RBP	4.04	□□□□□ -1.76
RFA2	YNL312W	SEC22	P22214	214 aa		4.04	□□□□□ -1.76
RFA2	YNL312W	RAD51	P25454	400 aa		4.04	□□□□□ -1.76
RFA2	YNL312W	SFC1	P33303	322 aa		4.04	□□□□□ -1.76
RFA2	YNL312W	FLC3	P53121	802 aa		4.04	□□□□□ -1.76
RFA2	YNL312W	RSM27	P53305	110 aa		4.04	□□□□□ -1.76
RFA2	YNL312W	CLP1	Q08685	445 aa	Predicted RBP	4.04	□□□□□ -1.76
RFA2	YNL312W	YEL009C-A	A0A023PZF2	135 aa		4.03	□□□□□ -1.76
RFA2	YNL312W	COX5A	P00424	153 aa		4.03	□□□□□ -1.76
RFA2	YNL312W	FPR1	P20081	114 aa	Known RBP	4.03	□□□□□ -1.76
RFA2	YNL312W	OAC1	P32332	324 aa		4.03	□□□□□ -1.76
RFA2	YNL312W	SPS18	P32572	300 aa		4.03	□□□□□ -1.76
RFA2	YNL312W	YCR087C-A	P37263	153 aa		4.03	□□□□□ -1.76
RFA2	YNL312W	YEL075C	P39972	122 aa		4.03	□□□□□ -1.76
RFA2	YNL312W	PDR17	P53844	350 aa		4.03	□□□□□ -1.76
RFA2	YNL312W	ALG9	P53868	555 aa	Known RBP	4.03	□□□□□ -1.76
RFA2	YNL312W	ARO80	Q04052	950 aa		4.03	□□□□□ -1.76
RFA2	YNL312W	YET1	P35723	206 aa		4.02	□□□□□ -1.77
RFA2	YNL312W	MID2	P36027	376 aa		4.02	□□□□□ -1.77
RFA2	YNL312W	SSH1	P38353	490 aa	Known RBP	4.02	□□□□□ -1.77
RFA2	YNL312W	HYR1	P40581	163 aa	Known RBP	4.02	□□□□□ -1.77
RFA2	YNL312W	CAT5	P41735	233 aa		4.02	□□□□□ -1.77
RFA2	YNL312W	ERV29	P53337	310 aa		4.02	□□□□□ -1.77
RFA2	YNL312W	YLR462W	O13556	202 aa		4.01	□□□□□ -1.77
RFA2	YNL312W	SGA1	P08019	549 aa		4.01	□□□□□ -1.77
RFA2	YNL312W	BXI1	P48558	297 aa		4.01	□□□□□ -1.77
RFA2	YNL312W	MIG2	P53035	382 aa		4.01	□□□□□ -1.77
RFA2	YNL312W	RMR1	P53060	241 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms