RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W MRPL20P22354 195 aaPredicted RBP3.29□□□□□ -1.88
PUB1YNL016W TAH1P25638 111 aaPredicted RBP3.29□□□□□ -1.88
PUB1YNL016W UPS2P35200 230 aa3.29□□□□□ -1.88
PUB1YNL016W PMU1P36069 295 aa3.29□□□□□ -1.88
PUB1YNL016W HEK2P38199 381 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88 RIP-Chip
PUB1YNL016W YEL073CP39974 107 aa3.29□□□□□ -1.88
PUB1YNL016W COS4P43542 379 aa3.29□□□□□ -1.88
PUB1YNL016W SNO3P43544 222 aa3.29□□□□□ -1.88
PUB1YNL016W BXI1P48558 297 aa3.29□□□□□ -1.88
PUB1YNL016W YMR010WQ03687 405 aa3.29□□□□□ -1.88
PUB1YNL016W GAS2Q06135 555 aa3.29□□□□□ -1.88
PUB1YNL016W YLR036CQ07986 203 aa3.29□□□□□ -1.88
PUB1YNL016W MIM1Q08176 113 aa3.29□□□□□ -1.88
PUB1YNL016W RRP40Q08285 240 aaKnown RBP3.29□□□□□ -1.88
PUB1YNL016W SEC16P48415 2195 aaKnown RBP3.29□□□□□ -1.88
PUB1YNL016W CYC3P06182 269 aa3.28□□□□□ -1.88
PUB1YNL016W SEC4P07560 215 aaKnown RBP3.28□□□□□ -1.88
PUB1YNL016W ERD2P18414 219 aa3.28□□□□□ -1.88
PUB1YNL016W OAC1P32332 324 aa3.28□□□□□ -1.88
PUB1YNL016W TRS65P32893 560 aa3.28□□□□□ -1.88
PUB1YNL016W MRPL15P36523 253 aa3.28□□□□□ -1.88
PUB1YNL016W YHL049CP38722 271 aa3.28□□□□□ -1.88
PUB1YNL016W BDH1P39714 382 aa3.28□□□□□ -1.88
PUB1YNL016W YMR144WP40214 342 aaKnown RBP3.28□□□□□ -1.88
PUB1YNL016W PDS1P40316 373 aaPredicted RBP3.28□□□□□ -1.88
PUB1YNL016W YIL086CP40503 102 aa3.28□□□□□ -1.88
PUB1YNL016W MAM33P40513 266 aa3.28□□□□□ -1.88
PUB1YNL016W CIN5P40917 295 aa3.28□□□□□ -1.88
PUB1YNL016W DIM1P41819 318 aaKnown RBP3.28□□□□□ -1.88
PUB1YNL016W FMP32P43557 207 aa3.28□□□□□ -1.88
PUB1YNL016W MRH4P53166 561 aa3.28□□□□□ -1.88
PUB1YNL016W YNL046WP53956 172 aa3.28□□□□□ -1.88
PUB1YNL016W DYN3Q04949 312 aa3.28□□□□□ -1.88
PUB1YNL016W YHC1Q05900 231 aaKnown RBP3.28□□□□□ -1.88
PUB1YNL016W ATX2Q12067 313 aa3.28□□□□□ -1.88
PUB1YNL016W ATP16Q12165 160 aa3.28□□□□□ -1.88
PUB1YNL016W MDM35O60200 86 aa3.27□□□□□ -1.89
PUB1YNL016W STE7P06784 515 aa3.27□□□□□ -1.89
PUB1YNL016W YER190C-BP0CX94 160 aa3.27□□□□□ -1.89
PUB1YNL016W YEL077W-AP0CX95 160 aa3.27□□□□□ -1.89
PUB1YNL016W YGR296C-BP0CX96 160 aa3.27□□□□□ -1.89
PUB1YNL016W YPL283W-BP0CX97 160 aa3.27□□□□□ -1.89
PUB1YNL016W YPR204C-AP0CX98 160 aa3.27□□□□□ -1.89
PUB1YNL016W FMP46P36141 133 aaKnown RBP3.27□□□□□ -1.89
PUB1YNL016W NAT2P37293 288 aa3.27□□□□□ -1.89
PUB1YNL016W TRM7P38238 310 aaKnown RBP3.27□□□□□ -1.89
PUB1YNL016W LSM12P38828 187 aaKnown RBP3.27□□□□□ -1.89
PUB1YNL016W ECM14P38836 430 aa3.27□□□□□ -1.89
PUB1YNL016W PEX17P40155 199 aa3.27□□□□□ -1.89
PUB1YNL016W YIL024CP40543 189 aa3.27□□□□□ -1.89
PUB1YNL016W PHB1P40961 287 aa3.27□□□□□ -1.89
PUB1YNL016W PSA1P41940 361 aaKnown RBP3.27□□□□□ -1.89
PUB1YNL016W SHY1P53266 389 aa3.27□□□□□ -1.89
PUB1YNL016W THP3Q12049 470 aaKnown RBP3.27□□□□□ -1.89
PUB1YNL016W CRC1Q12289 327 aa3.27□□□□□ -1.89
PUB1YNL016W RAX2Q12465 1220 aa3.27□□□□□ -1.89
PUB1YNL016W COS2P0CX12 379 aa3.26□□□□□ -1.89
PUB1YNL016W COS3P0CX13 379 aa3.26□□□□□ -1.89
PUB1YNL016W MRS3P10566 314 aa3.26□□□□□ -1.89
PUB1YNL016W MCK1P21965 375 aaKnown RBP3.26□□□□□ -1.89
PUB1YNL016W CAM1P29547 415 aaKnown RBP3.26□□□□□ -1.89
PUB1YNL016W URA10P30402 227 aa3.26□□□□□ -1.89
PUB1YNL016W APS1P35181 156 aa3.26□□□□□ -1.89
PUB1YNL016W OAR1P35731 278 aa3.26□□□□□ -1.89
PUB1YNL016W MRPL39P36533 70 aa3.26□□□□□ -1.89
PUB1YNL016W MOH1P38191 138 aa3.26□□□□□ -1.89
PUB1YNL016W FAR7P43592 221 aa3.26□□□□□ -1.89
PUB1YNL016W UBC12P52491 188 aa3.26□□□□□ -1.89
PUB1YNL016W SDS23P53172 527 aa3.26□□□□□ -1.89
PUB1YNL016W MPA43P53583 542 aaPredicted RBP3.26□□□□□ -1.89
PUB1YNL016W RCF2P53721 224 aa3.26□□□□□ -1.89
PUB1YNL016W RPL15BP54780 204 aaPredicted RBP3.26□□□□□ -1.89
PUB1YNL016W PET191Q02772 108 aa3.26□□□□□ -1.89
PUB1YNL016W YDR415CQ04033 374 aaPredicted RBP3.26□□□□□ -1.89
PUB1YNL016W ERP1Q05359 219 aaKnown RBP3.26□□□□□ -1.89
PUB1YNL016W YOR186WQ08560 144 aa3.26□□□□□ -1.89
PUB1YNL016W TIR4Q12218 487 aaPredicted RBP3.26□□□□□ -1.89
PUB1YNL016W HMS1Q12398 434 aa3.26□□□□□ -1.89
PUB1YNL016W YDL085C-AQ3E7B7 68 aaKnown RBP3.26□□□□□ -1.89
PUB1YNL016W IGO2Q9P305 131 aa3.26□□□□□ -1.89
PUB1YNL016W YMR316C-AI2HB70 103 aa3.25□□□□□ -1.89
PUB1YNL016W CMD1P06787 147 aaKnown RBP3.25□□□□□ -1.89
PUB1YNL016W DSF1P0CX08 502 aa3.25□□□□□ -1.89
PUB1YNL016W YNR073CP0CX09 502 aa3.25□□□□□ -1.89
PUB1YNL016W MDM10P18409 493 aa3.25□□□□□ -1.89
PUB1YNL016W IDP1P21954 428 aaKnown RBP3.25□□□□□ -1.89
PUB1YNL016W SEC22P22214 214 aa3.25□□□□□ -1.89
PUB1YNL016W AIM17P23180 465 aaKnown RBP3.25□□□□□ -1.89
PUB1YNL016W YCR023CP25351 611 aa3.25□□□□□ -1.89
PUB1YNL016W LDS1P31379 325 aa3.25□□□□□ -1.89
PUB1YNL016W MTC4P38335 694 aaKnown RBP3.25□□□□□ -1.89
PUB1YNL016W NVJ1P38881 321 aa3.25□□□□□ -1.89
PUB1YNL016W LSM4P40070 187 aaKnown RBP3.25□□□□□ -1.89
PUB1YNL016W YNL184CP53876 108 aa3.25□□□□□ -1.89
PUB1YNL016W CRZ1P53968 678 aa3.25□□□□□ -1.89
PUB1YNL016W HNT1Q04344 158 aaKnown RBP3.25□□□□□ -1.89
PUB1YNL016W FSH2Q05015 223 aa3.25□□□□□ -1.89
PUB1YNL016W YDR278CQ05612 105 aa3.25□□□□□ -1.89
PUB1YNL016W YOL019WQ08157 551 aa3.25□□□□□ -1.89
PUB1YNL016W SYC1Q08553 188 aaPredicted RBP3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms