RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPG4	YMR107W	VPS28	Q02767	242 aa		4.64	□□□□□ -1.67
SPG4	YMR107W	PKR1	Q03880	122 aa	Known RBP	4.64	□□□□□ -1.67
SPG4	YMR107W	MTQ2	Q03920	221 aa	Predicted RBP	4.64	□□□□□ -1.67
SPG4	YMR107W	SNO4	Q04902	237 aa		4.64	□□□□□ -1.67
SPG4	YMR107W	HRI1	Q05905	244 aa	Known RBP	4.64	□□□□□ -1.67
SPG4	YMR107W	HSP32	Q08992	237 aa		4.64	□□□□□ -1.67
SPG4	YMR107W	TPT1	Q12272	230 aa	Known RBP	4.64	□□□□□ -1.67
SPG4	YMR107W	PAR32	Q12515	295 aa	Known RBP	4.64	□□□□□ -1.67
SPG4	YMR107W	STE4	P18851	423 aa		4.63	□□□□□ -1.67
SPG4	YMR107W	ARF2	P19146	181 aa	Known RBP	4.63	□□□□□ -1.67
SPG4	YMR107W	ELO2	P25358	347 aa		4.63	□□□□□ -1.67
SPG4	YMR107W	AFG1	P32317	509 aa		4.63	□□□□□ -1.67
SPG4	YMR107W	SSH4	P32343	579 aa		4.63	□□□□□ -1.67
SPG4	YMR107W	YKL187C	P34231	750 aa		4.63	□□□□□ -1.67
SPG4	YMR107W	AIM29	P36154	155 aa		4.63	□□□□□ -1.67
SPG4	YMR107W	RRN10	P38204	145 aa		4.63	□□□□□ -1.67
SPG4	YMR107W	OM14	P38325	134 aa		4.63	□□□□□ -1.67
SPG4	YMR107W	BTT1	P40314	149 aa	Predicted RBP	4.63	□□□□□ -1.67
SPG4	YMR107W	YGR250C	P53316	781 aa	Known RBP	4.63	□□□□□ -1.67
SPG4	YMR107W	PAU4	P53427	120 aa		4.63	□□□□□ -1.67
SPG4	YMR107W	YNR066C	P53752	436 aa		4.63	□□□□□ -1.67
SPG4	YMR107W	IZH1	Q03419	316 aa		4.63	□□□□□ -1.67
SPG4	YMR107W	YDR248C	Q03786	193 aa		4.63	□□□□□ -1.67
SPG4	YMR107W	YDL242W	Q07746	117 aa		4.63	□□□□□ -1.67
SPG4	YMR107W	YLR030W	Q07967	263 aa		4.63	□□□□□ -1.67
SPG4	YMR107W	YOR378W	Q08902	515 aa		4.63	□□□□□ -1.67
SPG4	YMR107W	FRE8	Q12209	686 aa		4.63	□□□□□ -1.67
SPG4	YMR107W	COX5B	P00425	151 aa		4.62	□□□□□ -1.67
SPG4	YMR107W	PAU1	P0CE88	120 aa		4.62	□□□□□ -1.67
SPG4	YMR107W	PAU14	P0CE89	120 aa		4.62	□□□□□ -1.67
SPG4	YMR107W	PAU6	P0CE90	120 aa		4.62	□□□□□ -1.67
SPG4	YMR107W	PAU18	P0CE91	120 aa		4.62	□□□□□ -1.67
SPG4	YMR107W	PAU8	P0CE92	120 aa		4.62	□□□□□ -1.67
SPG4	YMR107W	PAU11	P0CE93	120 aa		4.62	□□□□□ -1.67
SPG4	YMR107W	YFL068W	P0CX99	160 aa		4.62	□□□□□ -1.67
SPG4	YMR107W	YLL066W-A	P0CY00	160 aa		4.62	□□□□□ -1.67
SPG4	YMR107W	YLL067W-A	P0CY01	160 aa		4.62	□□□□□ -1.67
SPG4	YMR107W	PDX1	P16451	410 aa		4.62	□□□□□ -1.67
SPG4	YMR107W	ERG1	P32476	496 aa	Known RBP	4.62	□□□□□ -1.67
SPG4	YMR107W	TRS65	P32893	560 aa		4.62	□□□□□ -1.67
SPG4	YMR107W	PAU16	P35994	123 aa		4.62	□□□□□ -1.67
SPG4	YMR107W	YBR292C	P38357	123 aa		4.62	□□□□□ -1.67
SPG4	YMR107W	PAU13	P38725	120 aa		4.62	□□□□□ -1.67
SPG4	YMR107W	HSP10	P38910	106 aa		4.62	□□□□□ -1.67
SPG4	YMR107W	SMD3	P43321	101 aa	Known RBP	4.62	□□□□□ -1.67
SPG4	YMR107W	SAM37	P50110	327 aa		4.62	□□□□□ -1.67
SPG4	YMR107W	MPP6	P53725	186 aa	Predicted RBP	4.62	□□□□□ -1.67
SPG4	YMR107W	PAU10	Q03050	120 aa		4.62	□□□□□ -1.67
SPG4	YMR107W	CCE1	Q03702	353 aa		4.62	□□□□□ -1.67
SPG4	YMR107W	YMR166C	Q03829	368 aa		4.62	□□□□□ -1.67
SPG4	YMR107W	YML096W	Q04489	525 aa		4.62	□□□□□ -1.67
SPG4	YMR107W	HRT1	Q08273	121 aa		4.62	□□□□□ -1.67
SPG4	YMR107W	PAU20	Q08322	120 aa		4.62	□□□□□ -1.67
SPG4	YMR107W	SWM1	Q12379	170 aa		4.62	□□□□□ -1.67
SPG4	YMR107W	PAU9	Q3E770	120 aa		4.62	□□□□□ -1.67
SPG4	YMR107W	RPS13	P05756	151 aa	Known RBP	4.61	□□□□□ -1.67
SPG4	YMR107W	CPA1	P07258	411 aa	Known RBP	4.61	□□□□□ -1.67
SPG4	YMR107W	MDH2	P22133	377 aa		4.61	□□□□□ -1.67
SPG4	YMR107W	GAS1	P22146	559 aa	Known RBP	4.61	□□□□□ -1.67
SPG4	YMR107W	ERG2	P32352	222 aa		4.61	□□□□□ -1.67
SPG4	YMR107W	MDL1	P33310	695 aa		4.61	□□□□□ -1.67
SPG4	YMR107W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
SPG4	YMR107W	PMU1	P36069	295 aa		4.61	□□□□□ -1.67
SPG4	YMR107W	YKL075C	P36083	450 aa		4.61	□□□□□ -1.67
SPG4	YMR107W	POP2	P39008	433 aa		4.61	□□□□□ -1.67
SPG4	YMR107W	PAC2	P39937	518 aa		4.61	□□□□□ -1.67
SPG4	YMR107W	GIM4	P40005	111 aa	Known RBP	4.61	□□□□□ -1.67
SPG4	YMR107W	IRC22	P40006	225 aa		4.61	□□□□□ -1.67
SPG4	YMR107W	YNL208W	P40159	199 aa	Known RBP	4.61	□□□□□ -1.67
SPG4	YMR107W	RPL13B	P40212	199 aa	Known RBP	4.61	□□□□□ -1.67
SPG4	YMR107W	YIL161W	P40449	235 aa	Known RBP	4.61	□□□□□ -1.67
SPG4	YMR107W	SMK1	P41808	388 aa		4.61	□□□□□ -1.67
SPG4	YMR107W	YJR011C	P47086	261 aa	Predicted RBP	4.61	□□□□□ -1.67
SPG4	YMR107W	TTI2	P47168	421 aa		4.61	□□□□□ -1.67
SPG4	YMR107W	HSV2	P50079	448 aa	Predicted RBP	4.61	□□□□□ -1.67
SPG4	YMR107W	VEL1	P53058	206 aa		4.61	□□□□□ -1.67
SPG4	YMR107W	YGR017W	P53210	297 aa		4.61	□□□□□ -1.67
SPG4	YMR107W	YLR152C	P54072	576 aa		4.61	□□□□□ -1.67
SPG4	YMR107W	YDR366C	P87287	132 aa		4.61	□□□□□ -1.67
SPG4	YMR107W	MRPL1	Q04599	285 aa		4.61	□□□□□ -1.67
SPG4	YMR107W	MRPL51	Q06090	140 aa	Predicted RBP	4.61	□□□□□ -1.67
SPG4	YMR107W	VAM3	Q12241	283 aa		4.61	□□□□□ -1.67
SPG4	YMR107W	RPL13A	Q12690	199 aa	Predicted RBP	4.61	□□□□□ -1.67
SPG4	YMR107W	YCR024C-B	Q3E7Z8	88 aa		4.61	□□□□□ -1.67
SPG4	YMR107W	CYC7	P00045	113 aa		4.6	□□□□□ -1.67
SPG4	YMR107W	MAK32	P23060	363 aa		4.6	□□□□□ -1.67
SPG4	YMR107W	SRP21	P32342	167 aa		4.6	□□□□□ -1.67
SPG4	YMR107W	UME6	P39001	836 aa		4.6	□□□□□ -1.67
SPG4	YMR107W	BDH1	P39714	382 aa		4.6	□□□□□ -1.67
SPG4	YMR107W	PIC2	P40035	300 aa		4.6	□□□□□ -1.67
SPG4	YMR107W	YER134C	P40081	178 aa		4.6	□□□□□ -1.67
SPG4	YMR107W	NAS2	P40555	220 aa		4.6	□□□□□ -1.67
SPG4	YMR107W	TAF4	P50105	388 aa		4.6	□□□□□ -1.67
SPG4	YMR107W	RIB4	P50861	169 aa	Predicted RBP	4.6	□□□□□ -1.67
SPG4	YMR107W	FLC3	P53121	802 aa		4.6	□□□□□ -1.67
SPG4	YMR107W	DUG3	P53871	357 aa		4.6	□□□□□ -1.67
SPG4	YMR107W	CGI121	Q03705	181 aa	Known RBP	4.6	□□□□□ -1.67
SPG4	YMR107W	CAB5	Q03941	241 aa		4.6	□□□□□ -1.67
SPG4	YMR107W	MCH1	Q07376	486 aa		4.6	□□□□□ -1.67
SPG4	YMR107W	YDR262W	Q12331	272 aa		4.6	□□□□□ -1.67

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