RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSI1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSI1YMR025W UBC6P33296 250 aaPredicted RBP1.52□□□□□ -2.17
CSI1YMR025W BIG1P38813 335 aa1.52□□□□□ -2.17
CSI1YMR025W YAR1P46683 200 aa1.52□□□□□ -2.17
CSI1YMR025W YJR012CP47087 207 aa1.52□□□□□ -2.17
CSI1YMR025W YJR149WP47177 404 aa1.52□□□□□ -2.17
CSI1YMR025W DAN1P47178 298 aa1.52□□□□□ -2.17
CSI1YMR025W OST3P48439 350 aa1.52□□□□□ -2.17
CSI1YMR025W BOL2P53082 120 aa1.52□□□□□ -2.17
CSI1YMR025W NHP10Q03435 203 aa1.52□□□□□ -2.17
CSI1YMR025W ATC1Q04005 294 aa1.52□□□□□ -2.17
CSI1YMR025W ADH6Q04894 360 aaKnown RBP1.52□□□□□ -2.17
CSI1YMR025W SLD7Q08457 257 aa1.52□□□□□ -2.17
CSI1YMR025W AKR2Q12013 749 aa1.52□□□□□ -2.17
CSI1YMR025W BTS1Q12051 335 aa1.52□□□□□ -2.17
CSI1YMR025W YOR342CQ12182 319 aa1.52□□□□□ -2.17
CSI1YMR025W TPO4Q12256 659 aa1.52□□□□□ -2.17
CSI1YMR025W SME1Q12330 94 aaPredicted RBP1.52□□□□□ -2.17
CSI1YMR025W CMD1P06787 147 aaKnown RBP1.51□□□□□ -2.17
CSI1YMR025W MRP1P10662 321 aaKnown RBP1.51□□□□□ -2.17
CSI1YMR025W CBF1P17106 351 aa1.51□□□□□ -2.17
CSI1YMR025W ADE1P27616 306 aa1.51□□□□□ -2.17
CSI1YMR025W QRI5P32344 111 aa1.51□□□□□ -2.17
CSI1YMR025W PRS2P38620 318 aaKnown RBP1.51□□□□□ -2.17
CSI1YMR025W YHI9P38765 294 aa1.51□□□□□ -2.17
CSI1YMR025W PET100P38958 111 aa1.51□□□□□ -2.17
CSI1YMR025W APQ12P40532 138 aa1.51□□□□□ -2.17
CSI1YMR025W PHB1P40961 287 aa1.51□□□□□ -2.17
CSI1YMR025W CUP9P41817 306 aa1.51□□□□□ -2.17
CSI1YMR025W HOC1P47124 396 aa1.51□□□□□ -2.17
CSI1YMR025W YJR141WP47172 347 aaPredicted RBP1.51□□□□□ -2.17
CSI1YMR025W NIF3P53081 288 aa1.51□□□□□ -2.17
CSI1YMR025W HPT1Q04178 221 aaKnown RBP1.51□□□□□ -2.17
CSI1YMR025W SML1Q04964 104 aa1.51□□□□□ -2.17
CSI1YMR025W FCF1Q05498 189 aaPredicted RBP1.51□□□□□ -2.17
CSI1YMR025W PEX10Q05568 337 aa1.51□□□□□ -2.17
CSI1YMR025W CDC123Q05791 360 aa1.51□□□□□ -2.17
CSI1YMR025W PST1Q12355 444 aa1.51□□□□□ -2.17
CSI1YMR025W AGC1Q12482 902 aa1.51□□□□□ -2.17
CSI1YMR025W YPL119C-AQ3E751 87 aa1.51□□□□□ -2.17
CSI1YMR025W YOR032W-AQ8TGS1 66 aa1.51□□□□□ -2.17
CSI1YMR025W YEL009C-AA0A023PZF2 135 aa1.5□□□□□ -2.17
CSI1YMR025W RPL26AP05743 127 aaKnown RBP1.5□□□□□ -2.17
CSI1YMR025W SPT3P06844 337 aa1.5□□□□□ -2.17
CSI1YMR025W TOM40P23644 387 aaKnown RBP1.5□□□□□ -2.17
CSI1YMR025W PTM1P32857 523 aa1.5□□□□□ -2.17
CSI1YMR025W YIL001WP40560 513 aa1.5□□□□□ -2.17
CSI1YMR025W YJL028WP47062 111 aa1.5□□□□□ -2.17
CSI1YMR025W JHD2P47156 728 aaPredicted RBP1.5□□□□□ -2.17
CSI1YMR025W EFM5P53200 248 aaKnown RBP1.5□□□□□ -2.17
CSI1YMR025W RPL26BP53221 127 aaKnown RBP1.5□□□□□ -2.17
CSI1YMR025W CTF19Q02732 369 aa1.5□□□□□ -2.17
CSI1YMR025W GOT1Q03554 138 aa1.5□□□□□ -2.17
CSI1YMR025W BOP2Q06150 570 aa1.5□□□□□ -2.17
CSI1YMR025W RIO1Q12196 484 aaKnown RBP1.5□□□□□ -2.17
CSI1YMR025W RUD3Q12234 484 aaKnown RBP1.5□□□□□ -2.17
CSI1YMR025W YOR029WQ12243 111 aa1.5□□□□□ -2.17
CSI1YMR025W YPR011CQ12251 326 aa1.5□□□□□ -2.17
CSI1YMR025W ISD11Q6Q560 94 aa1.5□□□□□ -2.17
CSI1YMR025W CDC36P06100 191 aaPredicted RBP1.49□□□□□ -2.17
CSI1YMR025W MRPL25P23369 157 aa1.49□□□□□ -2.17
CSI1YMR025W TRX3P25372 127 aa1.49□□□□□ -2.17
CSI1YMR025W TAH1P25638 111 aaPredicted RBP1.49□□□□□ -2.17
CSI1YMR025W EHD3P28817 500 aa1.49□□□□□ -2.17
CSI1YMR025W RPS27AP35997 82 aaKnown RBP1.49□□□□□ -2.17
CSI1YMR025W VPS21P36017 210 aaKnown RBP1.49□□□□□ -2.17
CSI1YMR025W RPS27BP38711 82 aa1.49□□□□□ -2.17
CSI1YMR025W YHB1P39676 399 aaKnown RBP1.49□□□□□ -2.17
CSI1YMR025W SMB1P40018 196 aaKnown RBP1.49□□□□□ -2.17
CSI1YMR025W ICE2P40499 491 aa1.49□□□□□ -2.17
CSI1YMR025W RPL10P41805 221 aaKnown RBP1.49□□□□□ -2.17
CSI1YMR025W BNA6P43619 295 aa1.49□□□□□ -2.17
CSI1YMR025W SLX9P53251 210 aaPredicted RBP1.49□□□□□ -2.17
CSI1YMR025W LSM3P57743 89 aaKnown RBP1.49□□□□□ -2.17
CSI1YMR025W YDR209CQ03480 137 aa1.49□□□□□ -2.17
CSI1YMR025W CSN9Q03981 162 aa1.49□□□□□ -2.17
CSI1YMR025W YPR172WQ06608 200 aa1.49□□□□□ -2.17
CSI1YMR025W SDO1Q07953 250 aaKnown RBP1.49□□□□□ -2.17
CSI1YMR025W MDM32Q12171 622 aa1.49□□□□□ -2.17
CSI1YMR025W YOR097CQ12274 175 aaPredicted RBP1.49□□□□□ -2.17
CSI1YMR025W YPL247CQ12523 523 aa1.49□□□□□ -2.17
CSI1YMR025W MHT1Q12525 324 aa1.49□□□□□ -2.17
CSI1YMR025W GCY1P14065 312 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
CSI1YMR025W SCO1P23833 295 aa1.48□□□□□ -2.17
CSI1YMR025W SEC14P24280 304 aaKnown RBP1.48□□□□□ -2.17
CSI1YMR025W DPB2P24482 689 aaPredicted RBP1.48□□□□□ -2.17
CSI1YMR025W YCR090CP25654 182 aaKnown RBP1.48□□□□□ -2.17
CSI1YMR025W SUI1P32911 108 aaKnown RBP1.48□□□□□ -2.17
CSI1YMR025W RPS1AP33442 255 aaKnown RBP1.48□□□□□ -2.17
CSI1YMR025W JEN1P36035 616 aa1.48□□□□□ -2.17
CSI1YMR025W PRS4P38063 326 aaPredicted RBP1.48□□□□□ -2.17
CSI1YMR025W ETR1P38071 380 aa1.48□□□□□ -2.17
CSI1YMR025W PRM10P42946 383 aa1.48□□□□□ -2.17
CSI1YMR025W AGX1P43567 385 aa1.48□□□□□ -2.17
CSI1YMR025W APS3P47064 194 aa1.48□□□□□ -2.17
CSI1YMR025W YJR146WP47174 117 aa1.48□□□□□ -2.17
CSI1YMR025W YGL034CP53186 121 aa1.48□□□□□ -2.17
CSI1YMR025W AAH1P53909 347 aa1.48□□□□□ -2.17
CSI1YMR025W YNL140CP53910 189 aa1.48□□□□□ -2.17
CSI1YMR025W GAS3Q03655 524 aa1.48□□□□□ -2.17
CSI1YMR025W GRH1Q04410 372 aaKnown RBP1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms