RNA–Protein interactions for RNA: YMR016C

SOK2, Transcript of Nuclear protein that negatively regulates pseudohyphal differentiation, yeastyeast

Gene SOK2, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK2YMR016C YML096WQ04489 525 aa1.57□□□□□ -2.16
SOK2YMR016C PET20Q99373 253 aa1.57□□□□□ -2.16
SOK2YMR016C HIS1P00498 297 aaKnown RBP1.57□□□□□ -2.16
SOK2YMR016C GCY1P14065 312 aaKnown RBP RIP-Chip data1.57□□□□□ -2.16not detected
SOK2YMR016C SNA3P14359 133 aa1.57□□□□□ -2.16
SOK2YMR016C RNA15P25299 296 aaPredicted RBP1.57□□□□□ -2.16
SOK2YMR016C IDH1P28834 360 aaKnown RBP RIP-Chip data1.57□□□□□ -2.16not detected
SOK2YMR016C SPS18P32572 300 aa1.57□□□□□ -2.16
SOK2YMR016C CSG2P35206 410 aa1.57□□□□□ -2.16
SOK2YMR016C YCR087C-AP37263 153 aa1.57□□□□□ -2.16
SOK2YMR016C NRK1P53915 240 aa1.57□□□□□ -2.16
SOK2YMR016C PEX12Q04370 399 aa1.57□□□□□ -2.16
SOK2YMR016C YLR053CQ12026 108 aa1.57□□□□□ -2.16
SOK2YMR016C EMP46Q12396 444 aa1.57□□□□□ -2.16
SOK2YMR016C ADE6P38972 1358 aaKnown RBP1.56□□□□□ -2.16
SOK2YMR016C SPT3P06844 337 aa1.56□□□□□ -2.16
SOK2YMR016C QCR2P07257 368 aa1.56□□□□□ -2.16
SOK2YMR016C YOL163WP0CF20 169 aa1.56□□□□□ -2.16
SOK2YMR016C CDC10P25342 322 aaKnown RBP1.56□□□□□ -2.16
SOK2YMR016C ARO7P32178 256 aa1.56□□□□□ -2.16
SOK2YMR016C SRP102P36057 244 aaPredicted RBP1.56□□□□□ -2.16
SOK2YMR016C ECM34P38728 170 aa1.56□□□□□ -2.16
SOK2YMR016C ASP1P38986 381 aaPredicted RBP1.56□□□□□ -2.16
SOK2YMR016C YIL012WP40551 113 aa1.56□□□□□ -2.16
SOK2YMR016C FMP32P43557 207 aa1.56□□□□□ -2.16
SOK2YMR016C NUP49Q02199 472 aa1.56□□□□□ -2.16
SOK2YMR016C TAF9Q05027 157 aa1.56□□□□□ -2.16
SOK2YMR016C NSL1Q12143 216 aa1.56□□□□□ -2.16
SOK2YMR016C YCT1Q12235 531 aa1.56□□□□□ -2.16
SOK2YMR016C AGC1Q12482 902 aa1.56□□□□□ -2.16
SOK2YMR016C RPS23AP0CX29 145 aaKnown RBP1.56□□□□□ -2.16
SOK2YMR016C RPS23BP0CX30 145 aa1.56□□□□□ -2.16
SOK2YMR016C RPL4AP10664 362 aaKnown RBP1.56□□□□□ -2.16
SOK2YMR016C DPM1P14020 267 aaKnown RBP1.56□□□□□ -2.16
SOK2YMR016C TRR1P29509 319 aaKnown RBP1.56□□□□□ -2.16
SOK2YMR016C HEK2P38199 381 aaKnown RBP RIP-Chip data1.56□□□□□ -2.16not detected
SOK2YMR016C DER1P38307 211 aa1.56□□□□□ -2.16
SOK2YMR016C SRP14P38985 146 aa1.56□□□□□ -2.16
SOK2YMR016C RPL10P41805 221 aaKnown RBP1.56□□□□□ -2.16
SOK2YMR016C ASG7P46993 209 aa1.56□□□□□ -2.16
SOK2YMR016C RPL4BP49626 362 aaKnown RBP1.56□□□□□ -2.16
SOK2YMR016C TRM9P49957 279 aa1.56□□□□□ -2.16
SOK2YMR016C YGL118CP53132 145 aa1.56□□□□□ -2.16
SOK2YMR016C CAB4P53332 305 aa1.56□□□□□ -2.16
SOK2YMR016C PET191Q02772 108 aa1.56□□□□□ -2.16
SOK2YMR016C ARC18Q05933 178 aaKnown RBP1.56□□□□□ -2.16
SOK2YMR016C RRP42Q12277 265 aaPredicted RBP1.56□□□□□ -2.16
SOK2YMR016C TIM22Q12328 207 aa1.56□□□□□ -2.16
SOK2YMR016C JLP1Q12358 412 aa1.56□□□□□ -2.16
SOK2YMR016C BCY1P07278 416 aaKnown RBP1.55□□□□□ -2.16
SOK2YMR016C CUP2P15315 225 aa1.55□□□□□ -2.16
SOK2YMR016C IMP1P28627 190 aa1.55□□□□□ -2.16
SOK2YMR016C JEN1P36035 616 aa1.55□□□□□ -2.16
SOK2YMR016C FZO1P38297 855 aa1.55□□□□□ -2.16
SOK2YMR016C MED8P38304 223 aa1.55□□□□□ -2.16
SOK2YMR016C GRE3P38715 327 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
SOK2YMR016C TRR2P38816 342 aa1.55□□□□□ -2.16
SOK2YMR016C NVJ1P38881 321 aa1.55□□□□□ -2.16
SOK2YMR016C EDC2P40023 145 aaPredicted RBP1.55□□□□□ -2.16
SOK2YMR016C YFR045WP43617 309 aa1.55□□□□□ -2.16
SOK2YMR016C MOG1P47123 218 aa1.55□□□□□ -2.16
SOK2YMR016C NUP57P48837 541 aa1.55□□□□□ -2.16
SOK2YMR016C PRP24P49960 444 aaKnown RBP1.55□□□□□ -2.16
SOK2YMR016C EMI1Q04406 187 aa1.55□□□□□ -2.16
SOK2YMR016C FCF1Q05498 189 aaPredicted RBP1.55□□□□□ -2.16
SOK2YMR016C MSA1Q08471 629 aa1.55□□□□□ -2.16
SOK2YMR016C YPL150WQ12152 901 aa1.55□□□□□ -2.16
SOK2YMR016C RAD50P12753 1312 aa1.55□□□□□ -2.16
SOK2YMR016C RPS19AP07280 144 aaKnown RBP1.55□□□□□ -2.16
SOK2YMR016C RPS19BP07281 144 aaPredicted RBP1.55□□□□□ -2.16
SOK2YMR016C MRP1P10662 321 aaKnown RBP1.55□□□□□ -2.16
SOK2YMR016C SSH1P38353 490 aaKnown RBP1.55□□□□□ -2.16
SOK2YMR016C CYC2P38909 366 aa1.55□□□□□ -2.16
SOK2YMR016C YER076CP40049 302 aa1.55□□□□□ -2.16
SOK2YMR016C PRM10P42946 383 aa1.55□□□□□ -2.16
SOK2YMR016C MIC19P43594 170 aa1.55□□□□□ -2.16
SOK2YMR016C IRC18P47056 224 aa1.55□□□□□ -2.16
SOK2YMR016C YGL235WP53071 178 aa1.55□□□□□ -2.16
SOK2YMR016C NSA1P53136 463 aaPredicted RBP1.55□□□□□ -2.16
SOK2YMR016C USE1P53146 245 aa1.55□□□□□ -2.16
SOK2YMR016C MMS2P53152 137 aa1.55□□□□□ -2.16
SOK2YMR016C YPR127WQ06494 345 aa1.55□□□□□ -2.16
SOK2YMR016C NOC4Q06512 552 aaPredicted RBP1.55□□□□□ -2.16
SOK2YMR016C YOL019WQ08157 551 aa1.55□□□□□ -2.16
SOK2YMR016C YOR283WQ12040 230 aaKnown RBP1.55□□□□□ -2.16
SOK2YMR016C WIP1Q2V2P8 89 aa1.55□□□□□ -2.16
SOK2YMR016C PPH21P23594 369 aa1.54□□□□□ -2.16
SOK2YMR016C YCR023CP25351 611 aa1.54□□□□□ -2.16
SOK2YMR016C MGT1P26188 188 aa1.54□□□□□ -2.16
SOK2YMR016C TRS20P38334 175 aa1.54□□□□□ -2.16
SOK2YMR016C SLM6P38343 150 aa1.54□□□□□ -2.16
SOK2YMR016C COX15P40086 486 aa1.54□□□□□ -2.16
SOK2YMR016C UBC12P52491 188 aa1.54□□□□□ -2.16
SOK2YMR016C CAX4P53223 239 aa1.54□□□□□ -2.16
SOK2YMR016C YGR042WP53227 271 aa1.54□□□□□ -2.16
SOK2YMR016C COG5P53951 403 aa1.54□□□□□ -2.16
SOK2YMR016C HSK3P69852 69 aa1.54□□□□□ -2.16
SOK2YMR016C YMR279CQ03263 540 aa1.54□□□□□ -2.16
SOK2YMR016C CTR3Q06686 241 aa1.54□□□□□ -2.16
SOK2YMR016C RFU1Q08003 200 aa1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms