RNA–Protein interactions for RNA: YLR455W

PDP3, Transcript of Component of the NuA3b histone acetyltransferase complex, yeastyeast

Gene PDP3, Length 915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDP3YLR455W HMLALPHA2P0CY09 210 aa1.6□□□□□ -2.15
PDP3YLR455W YCR016WP25617 290 aaKnown RBP1.6□□□□□ -2.15
PDP3YLR455W NTG1P31378 399 aa1.6□□□□□ -2.15
PDP3YLR455W YKL075CP36083 450 aa1.6□□□□□ -2.15
PDP3YLR455W BIG1P38813 335 aa1.6□□□□□ -2.15
PDP3YLR455W YHR125WP38831 101 aa1.6□□□□□ -2.15
PDP3YLR455W CTR2P38865 189 aa1.6□□□□□ -2.15
PDP3YLR455W AYR1P40471 297 aa1.6□□□□□ -2.15
PDP3YLR455W FMC1P40491 155 aa1.6□□□□□ -2.15
PDP3YLR455W FIS1P40515 155 aa1.6□□□□□ -2.15
PDP3YLR455W SNZ2P53824 298 aa1.6□□□□□ -2.15
PDP3YLR455W PET117Q02771 107 aa1.6□□□□□ -2.15
PDP3YLR455W PRM15Q03262 622 aa1.6□□□□□ -2.15
PDP3YLR455W FUS2Q05670 677 aa1.6□□□□□ -2.15
PDP3YLR455W YPR098CQ06089 161 aa1.6□□□□□ -2.15
PDP3YLR455W NKP2Q06162 153 aa1.6□□□□□ -2.15
PDP3YLR455W YCT1Q12235 531 aa1.6□□□□□ -2.15
PDP3YLR455W MSN4P33749 630 aa1.59□□□□□ -2.15
PDP3YLR455W BFR1P38934 470 aaKnown RBP RIP-Chip data1.59□□□□□ -2.15not detected
PDP3YLR455W GAA1P39012 614 aa1.59□□□□□ -2.15
PDP3YLR455W RMR1P53060 241 aa1.59□□□□□ -2.15
PDP3YLR455W USE1P53146 245 aa1.59□□□□□ -2.15
PDP3YLR455W GTR2P53290 341 aa1.59□□□□□ -2.15
PDP3YLR455W YNL046WP53956 172 aa1.59□□□□□ -2.15
PDP3YLR455W SRL4Q03085 281 aa1.59□□□□□ -2.15
PDP3YLR455W YDR209CQ03480 137 aa1.59□□□□□ -2.15
PDP3YLR455W YPR172WQ06608 200 aa1.59□□□□□ -2.15
PDP3YLR455W PAM18Q07914 168 aa1.59□□□□□ -2.15
PDP3YLR455W AKR2Q12013 749 aa1.59□□□□□ -2.15
PDP3YLR455W MHT1Q12525 324 aa1.59□□□□□ -2.15
PDP3YLR455W YHR086W-AQ3E746 53 aa1.59□□□□□ -2.15
PDP3YLR455W YLR422WQ06409 1932 aa1.59□□□□□ -2.15
PDP3YLR455W RPL22AP05749 121 aaKnown RBP1.58□□□□□ -2.16
PDP3YLR455W CUP1-1P0CX80 61 aa1.58□□□□□ -2.16
PDP3YLR455W CUP1-2P0CX81 61 aa1.58□□□□□ -2.16
PDP3YLR455W ERD2P18414 219 aa1.58□□□□□ -2.16
PDP3YLR455W PEX34P25584 144 aa1.58□□□□□ -2.16
PDP3YLR455W MRPL39P36533 70 aa1.58□□□□□ -2.16
PDP3YLR455W GCN20P43535 752 aaKnown RBP1.58□□□□□ -2.16
PDP3YLR455W SMD2Q06217 110 aaKnown RBP1.58□□□□□ -2.16
PDP3YLR455W YLR030WQ07967 263 aa1.58□□□□□ -2.16
PDP3YLR455W RRP40Q08285 240 aaKnown RBP1.58□□□□□ -2.16
PDP3YLR455W YOR029WQ12243 111 aa1.58□□□□□ -2.16
PDP3YLR455W BBP1Q12365 385 aa1.58□□□□□ -2.16
PDP3YLR455W MSB2P32334 1306 aa1.58□□□□□ -2.16
PDP3YLR455W SCL1P21243 252 aaKnown RBP1.57□□□□□ -2.16
PDP3YLR455W ERG24P32462 438 aaKnown RBP1.57□□□□□ -2.16
PDP3YLR455W SGE1P33335 543 aa1.57□□□□□ -2.16
PDP3YLR455W MSA2P36157 363 aa1.57□□□□□ -2.16
PDP3YLR455W SIP3P38717 1229 aa1.57□□□□□ -2.16
PDP3YLR455W YER085CP40058 173 aa1.57□□□□□ -2.16
PDP3YLR455W RSM25P40496 264 aa1.57□□□□□ -2.16
PDP3YLR455W YGL159WP53110 370 aa1.57□□□□□ -2.16
PDP3YLR455W PGA2P53903 129 aa1.57□□□□□ -2.16
PDP3YLR455W KRE28Q04431 385 aa1.57□□□□□ -2.16
PDP3YLR455W SEI1Q06058 285 aa1.57□□□□□ -2.16
PDP3YLR455W MSH5Q12175 901 aa1.57□□□□□ -2.16
PDP3YLR455W SNU23Q12368 194 aaPredicted RBP1.57□□□□□ -2.16
PDP3YLR455W YHR032W-AP0C5N6 59 aa1.56□□□□□ -2.16
PDP3YLR455W DSF1P0CX08 502 aa1.56□□□□□ -2.16
PDP3YLR455W YNR073CP0CX09 502 aa1.56□□□□□ -2.16
PDP3YLR455W FBA1P14540 359 aaKnown RBP1.56□□□□□ -2.16
PDP3YLR455W RPB4P20433 221 aaPredicted RBP1.56□□□□□ -2.16
PDP3YLR455W MDH3P32419 343 aaKnown RBP RIP-Chip data1.56□□□□□ -2.16not detected
PDP3YLR455W YJR056CP47115 236 aa1.56□□□□□ -2.16
PDP3YLR455W CGR1P53188 120 aa1.56□□□□□ -2.16
PDP3YLR455W YLR179CQ06252 201 aaKnown RBP1.56□□□□□ -2.16
PDP3YLR455W RRS1Q08746 203 aaKnown RBP1.56□□□□□ -2.16
PDP3YLR455W YPL257WQ08974 193 aa1.56□□□□□ -2.16
PDP3YLR455W GPM2Q12008 311 aa1.56□□□□□ -2.16
PDP3YLR455W ATG31Q12421 196 aa1.56□□□□□ -2.16
PDP3YLR455W NUM1Q00402 2748 aa1.56□□□□□ -2.16
PDP3YLR455W LAA1P39526 2014 aa1.56□□□□□ -2.16
PDP3YLR455W SEN1Q00416 2231 aaKnown RBP1.55□□□□□ -2.16
PDP3YLR455W FPR1P20081 114 aaKnown RBP1.55□□□□□ -2.16
PDP3YLR455W PPA2P28239 310 aa1.55□□□□□ -2.16
PDP3YLR455W PEX4P29340 183 aa1.55□□□□□ -2.16
PDP3YLR455W LDB7P38210 180 aa1.55□□□□□ -2.16
PDP3YLR455W RPF1P38805 295 aaKnown RBP1.55□□□□□ -2.16
PDP3YLR455W YHR127WP38833 243 aaKnown RBP1.55□□□□□ -2.16
PDP3YLR455W PEP8P40335 379 aa1.55□□□□□ -2.16
PDP3YLR455W RPA43P46669 326 aa1.55□□□□□ -2.16
PDP3YLR455W HAM1P47119 197 aaKnown RBP1.55□□□□□ -2.16
PDP3YLR455W HOC1P47124 396 aa1.55□□□□□ -2.16
PDP3YLR455W MRPS8Q03799 155 aa1.55□□□□□ -2.16
PDP3YLR455W GRX3Q03835 250 aa1.55□□□□□ -2.16
PDP3YLR455W YLR283WQ05867 314 aa1.55□□□□□ -2.16
PDP3YLR455W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
PDP3YLR455W GIS3Q12418 502 aa1.55□□□□□ -2.16
PDP3YLR455W RAS2P01120 322 aaKnown RBP1.54□□□□□ -2.16
PDP3YLR455W CDC7P06243 507 aa1.54□□□□□ -2.16
PDP3YLR455W MATALPHA1P0CY06 175 aa1.54□□□□□ -2.16
PDP3YLR455W HMLALPHA1P0CY07 175 aa1.54□□□□□ -2.16
PDP3YLR455W NHP6BP11633 99 aaKnown RBP1.54□□□□□ -2.16
PDP3YLR455W GRX2P17695 143 aaKnown RBP1.54□□□□□ -2.16
PDP3YLR455W RPL24BP24000 155 aaKnown RBP1.54□□□□□ -2.16
PDP3YLR455W RPS5P26783 225 aaKnown RBP1.54□□□□□ -2.16
PDP3YLR455W YKT6P36015 200 aaKnown RBP1.54□□□□□ -2.16
PDP3YLR455W YPT52P36018 234 aaKnown RBP1.54□□□□□ -2.16
PDP3YLR455W SRX1P36077 127 aa1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms